RNA–Protein interactions for RNA: ENST00000395756.5

SREBF1-204, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 3,026 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-204ENST00000395756 PI4K2BQ8TCG2 481 aa21.82■■□□□ 1.08
SREBF1-204ENST00000395756 UPF3BQ9BZI7 483 aaKnown RBP21.82■■□□□ 1.08
SREBF1-204ENST00000395756 LMO7Q8WWI1 1683 aa21.82■■□□□ 1.08
SREBF1-204ENST00000395756 ALS2Q96Q42 1657 aa21.82■■□□□ 1.08
SREBF1-204ENST00000395756 WDR17Q8IZU2 1322 aa21.82■■□□□ 1.08
SREBF1-204ENST00000395756 G3BP1Q13283 466 aaKnown RBP eCLIP21.82■■□□□ 1.08
SREBF1-204ENST00000395756 UBE3BQ7Z3V4 1068 aa21.82■■□□□ 1.08
SREBF1-204ENST00000395756 PHRF1Q9P1Y6 1649 aaKnown RBP21.81■■□□□ 1.08
SREBF1-204ENST00000395756 ST18O60284 1047 aa21.81■■□□□ 1.08
SREBF1-204ENST00000395756 CHMP3Q9Y3E7 222 aa21.81■■□□□ 1.08
SREBF1-204ENST00000395756 SSFA2P28290 1259 aa21.8■■□□□ 1.08
SREBF1-204ENST00000395756 GCKRQ14397 625 aa21.8■■□□□ 1.08
SREBF1-204ENST00000395756 HSP90AB4PQ58FF6 505 aa21.8■■□□□ 1.08
SREBF1-204ENST00000395756 FOXD4L5Q5VV16 416 aaPredicted RBP21.8■■□□□ 1.08
SREBF1-204ENST00000395756 FOXD4L4Q8WXT5 416 aaPredicted RBP21.8■■□□□ 1.08
SREBF1-204ENST00000395756 ZGPATQ8N5A5 531 aaKnown RBP21.8■■□□□ 1.08
SREBF1-204ENST00000395756 KDM3BQ7LBC6 1761 aa21.8■■□□□ 1.08
SREBF1-204ENST00000395756 A0A0G2JS52 829 aa21.8■■□□□ 1.08
SREBF1-204ENST00000395756 IL2RBP14784 551 aa21.79■■□□□ 1.08
SREBF1-204ENST00000395756 METTL22Q9BUU2 404 aaPredicted RBP21.79■■□□□ 1.08
SREBF1-204ENST00000395756 SOS2Q07890 1332 aaPredicted RBP21.79■■□□□ 1.08
SREBF1-204ENST00000395756 ZBTB3Q9H5J0 574 aa21.78■■□□□ 1.08
SREBF1-204ENST00000395756 NCOA3Q9Y6Q9 1424 aa21.78■■□□□ 1.08
SREBF1-204ENST00000395756 A0A087WZG4 1122 aa21.78■■□□□ 1.08
SREBF1-204ENST00000395756 DDIT3P35638 169 aa21.78■■□□□ 1.08
SREBF1-204ENST00000395756 PKP1Q13835 747 aa21.78■■□□□ 1.08
SREBF1-204ENST00000395756 TTLL7Q6ZT98 887 aa21.78■■□□□ 1.08
SREBF1-204ENST00000395756 LARP6Q9BRS8 491 aaKnown RBP21.78■■□□□ 1.08
SREBF1-204ENST00000395756 TLR7Q9NYK1 1049 aaKnown RBP21.78■■□□□ 1.08
SREBF1-204ENST00000395756 TRAK2O60296 914 aa21.77■■□□□ 1.08
SREBF1-204ENST00000395756 SASH1O94885 1247 aa21.77■■□□□ 1.08
SREBF1-204ENST00000395756 CNTROBQ8N137 903 aa21.77■■□□□ 1.08
SREBF1-204ENST00000395756 BTG4Q9NY30 223 aa21.77■■□□□ 1.08
SREBF1-204ENST00000395756 EAF2Q96CJ1 260 aaPredicted RBP21.77■■□□□ 1.07
SREBF1-204ENST00000395756 CPDO75976 1380 aa21.76■■□□□ 1.07
SREBF1-204ENST00000395756 NBPF26B4DH59 902 aa21.76■■□□□ 1.07
SREBF1-204ENST00000395756 NBPF14Q5TI25 921 aa21.76■■□□□ 1.07
SREBF1-204ENST00000395756 NBPF10Q6P3W6 841 aaKnown RBP21.76■■□□□ 1.07
SREBF1-204ENST00000395756 NBPF15Q8N660 670 aa21.76■■□□□ 1.07
SREBF1-204ENST00000395756 OVOS2A0A0G2JMS6 1433 aa21.76■■□□□ 1.07
SREBF1-204ENST00000395756 MCCP23508 829 aa21.76■■□□□ 1.07
SREBF1-204ENST00000395756 BOLA2Q9H3K6 86 aa21.76■■□□□ 1.07
SREBF1-204ENST00000395756 CAMTA1Q9Y6Y1 1673 aa21.76■■□□□ 1.07
SREBF1-204ENST00000395756 PCDH11XQ9BZA7 1347 aa21.76■■□□□ 1.07
SREBF1-204ENST00000395756 PCDH11YQ9BZA8 1340 aa21.76■■□□□ 1.07
SREBF1-204ENST00000395756 MTX1Q13505 466 aa21.75■■□□□ 1.07
SREBF1-204ENST00000395756 CACNA1FO60840 1977 aa21.75■■□□□ 1.07
SREBF1-204ENST00000395756 ECHDC1Q9NTX5 307 aa21.74■■□□□ 1.07
SREBF1-204ENST00000395756 HDAC5Q9UQL6 1122 aa21.74■■□□□ 1.07
SREBF1-204ENST00000395756 NDUFB9Q9Y6M9 179 aa21.74■■□□□ 1.07
SREBF1-204ENST00000395756 LMTK3Q96Q04 1460 aa21.74■■□□□ 1.07
SREBF1-204ENST00000395756 LRP10Q7Z4F1 713 aa21.74■■□□□ 1.07
SREBF1-204ENST00000395756 SYTL4Q96C24 671 aaPredicted RBP21.74■■□□□ 1.07
SREBF1-204ENST00000395756 DTNBO60941 627 aa21.74■■□□□ 1.07
SREBF1-204ENST00000395756 RAB3GAP1Q15042 981 aa21.74■■□□□ 1.07
SREBF1-204ENST00000395756 DIAPH3Q9NSV4 1193 aa21.74■■□□□ 1.07
SREBF1-204ENST00000395756 GLRX3O76003 335 aaKnown RBP21.73■■□□□ 1.07
SREBF1-204ENST00000395756 CHAMP1Q96JM3 812 aa21.73■■□□□ 1.07
SREBF1-204ENST00000395756 KIAA1211Q6ZU35 1233 aa21.72■■□□□ 1.07
SREBF1-204ENST00000395756 EDC3Q96F86 508 aaKnown RBP21.72■■□□□ 1.07
SREBF1-204ENST00000395756 CARD10Q9BWT7 1032 aa21.72■■□□□ 1.07
SREBF1-204ENST00000395756 ERC1Q8IUD2 1116 aa21.71■■□□□ 1.07
SREBF1-204ENST00000395756 CCDC85AQ96PX6 553 aaPredicted RBP21.71■■□□□ 1.07
SREBF1-204ENST00000395756 CPA1P15085 419 aa21.7■■□□□ 1.06
SREBF1-204ENST00000395756 GPATCH3Q96I76 525 aa21.7■■□□□ 1.06
SREBF1-204ENST00000395756 GBP4Q96PP9 640 aa21.7■■□□□ 1.06
SREBF1-204ENST00000395756 ASAP1Q9ULH1 1129 aa21.7■■□□□ 1.06
SREBF1-204ENST00000395756 FOXD4L6Q3SYB3 417 aaPredicted RBP21.7■■□□□ 1.06
SREBF1-204ENST00000395756 LMBR1LQ6UX01 489 aa21.7■■□□□ 1.06
SREBF1-204ENST00000395756 FOXD4L3Q6VB84 417 aaPredicted RBP21.7■■□□□ 1.06
SREBF1-204ENST00000395756 TMX3Q96JJ7 454 aa21.7■■□□□ 1.06
SREBF1-204ENST00000395756 CIZ1Q9ULV3 898 aaPredicted RBP21.69■■□□□ 1.06
SREBF1-204ENST00000395756 SGSM2O43147 1006 aa21.69■■□□□ 1.06
SREBF1-204ENST00000395756 TMOD3Q9NYL9 352 aa21.69■■□□□ 1.06
SREBF1-204ENST00000395756 COL18A1P39060 1754 aa21.69■■□□□ 1.06
SREBF1-204ENST00000395756 AOX1Q06278 1338 aa21.69■■□□□ 1.06
SREBF1-204ENST00000395756 PLBD2Q8NHP8 589 aa21.69■■□□□ 1.06
SREBF1-204ENST00000395756 KAT6BQ8WYB5 2073 aa21.68■■□□□ 1.06
SREBF1-204ENST00000395756 COL5A2P05997 1499 aaPredicted RBP21.68■■□□□ 1.06
SREBF1-204ENST00000395756 TFCP2Q12800 502 aa21.68■■□□□ 1.06
SREBF1-204ENST00000395756 FAM227BQ96M60 508 aa21.68■■□□□ 1.06
SREBF1-204ENST00000395756 UTYO14607 1347 aa21.67■■□□□ 1.06
SREBF1-204ENST00000395756 RASEFQ8IZ41 740 aa21.67■■□□□ 1.06
SREBF1-204ENST00000395756 DDX11L8A8MPP1 907 aa21.67■■□□□ 1.06
SREBF1-204ENST00000395756 ERVV-2B6SEH9 535 aa21.67■■□□□ 1.06
SREBF1-204ENST00000395756 ADAMTS2O95450 1211 aa21.67■■□□□ 1.06
SREBF1-204ENST00000395756 TTC41PQ6P2S7 1318 aa21.67■■□□□ 1.06
SREBF1-204ENST00000395756 PTH1RQ03431 593 aa21.66■■□□□ 1.06
SREBF1-204ENST00000395756 MCTP1Q6DN14 999 aa21.66■■□□□ 1.06
SREBF1-204ENST00000395756 NCLP19338 710 aaKnown RBP21.65■■□□□ 1.06
SREBF1-204ENST00000395756 KCNJ4P48050 445 aa21.65■■□□□ 1.06
SREBF1-204ENST00000395756 PTPN12Q05209 780 aaKnown RBP21.65■■□□□ 1.06
SREBF1-204ENST00000395756 CHGBP05060 677 aa21.65■■□□□ 1.06
SREBF1-204ENST00000395756 ZNF594Q96JF6 807 aaPredicted RBP21.65■■□□□ 1.06
SREBF1-204ENST00000395756 FSD1Q9BTV5 496 aa21.65■■□□□ 1.06
SREBF1-204ENST00000395756 DNAJC10Q8IXB1 793 aa21.64■■□□□ 1.06
SREBF1-204ENST00000395756 PIGBQ92521 554 aa21.64■■□□□ 1.06
SREBF1-204ENST00000395756 NEUROD6Q96NK8 337 aa21.64■■□□□ 1.06
SREBF1-204ENST00000395756 HSPA4P34932 840 aa21.64■■□□□ 1.05
SREBF1-204ENST00000395756 PRPF40BQ6NWY9 871 aaKnown RBP21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms