RNA–Protein interactions for RNA: ENST00000394804.6

UBE2D3-209, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 4,166 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-209ENST00000394804 FOSBP53539 338 aa13.86□□□□□ -0.19
UBE2D3-209ENST00000394804 AOX1Q06278 1338 aa13.86□□□□□ -0.19
UBE2D3-209ENST00000394804 HCLS1P14317 486 aaPredicted RBP13.86□□□□□ -0.19
UBE2D3-209ENST00000394804 KRT32Q14532 448 aa13.86□□□□□ -0.19
UBE2D3-209ENST00000394804 NEUROD6Q96NK8 337 aa13.86□□□□□ -0.19
UBE2D3-209ENST00000394804 ADCY5O95622 1261 aa13.86□□□□□ -0.19
UBE2D3-209ENST00000394804 ZNF592Q92610 1267 aa13.86□□□□□ -0.19
UBE2D3-209ENST00000394804 OSBPL3Q9H4L5 887 aa13.86□□□□□ -0.19
UBE2D3-209ENST00000394804 PHF8Q9UPP1 1060 aa13.86□□□□□ -0.19
UBE2D3-209ENST00000394804 CNPY2Q9Y2B0 182 aa13.86□□□□□ -0.19
UBE2D3-209ENST00000394804 PPLO60437 1756 aa13.86□□□□□ -0.19
UBE2D3-209ENST00000394804 AMOTQ4VCS5 1084 aa13.86□□□□□ -0.19
UBE2D3-209ENST00000394804 TMEM63CQ9P1W3 806 aa13.86□□□□□ -0.19
UBE2D3-209ENST00000394804 CHPF2Q9P2E5 772 aa13.86□□□□□ -0.19
UBE2D3-209ENST00000394804 ALKQ9UM73 1620 aa13.85□□□□□ -0.19
UBE2D3-209ENST00000394804 BRD1O95696 1058 aa13.85□□□□□ -0.19
UBE2D3-209ENST00000394804 ANXA1P04083 346 aa13.85□□□□□ -0.19
UBE2D3-209ENST00000394804 MPRIPQ6WCQ1 1025 aa13.85□□□□□ -0.19
UBE2D3-209ENST00000394804 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.85□□□□□ -0.19
UBE2D3-209ENST00000394804 SCAND2PQ9GZW5 306 aaPredicted RBP13.85□□□□□ -0.19
UBE2D3-209ENST00000394804 BOLA2Q9H3K6 86 aa13.85□□□□□ -0.19
UBE2D3-209ENST00000394804 ADAMTS13Q76LX8 1427 aa13.85□□□□□ -0.19
UBE2D3-209ENST00000394804 AK2P54819 239 aa13.84□□□□□ -0.19
UBE2D3-209ENST00000394804 F13A1P00488 732 aa13.84□□□□□ -0.19
UBE2D3-209ENST00000394804 CCDC8Q9H0W5 538 aaPredicted RBP13.84□□□□□ -0.19
UBE2D3-209ENST00000394804 BABAM1Q9NWV8 329 aa13.84□□□□□ -0.19
UBE2D3-209ENST00000394804 MAP3K2Q9Y2U5 619 aa13.84□□□□□ -0.19
UBE2D3-209ENST00000394804 DYNC1I1O14576 645 aa13.84□□□□□ -0.19
UBE2D3-209ENST00000394804 CPLX1O14810 134 aa13.84□□□□□ -0.19
UBE2D3-209ENST00000394804 KINO60870 393 aaKnown RBP13.84□□□□□ -0.19
UBE2D3-209ENST00000394804 TTC41PQ6P2S7 1318 aa13.84□□□□□ -0.19
UBE2D3-209ENST00000394804 ADGRB2O60241 1585 aa13.83□□□□□ -0.19
UBE2D3-209ENST00000394804 MYL6BP14649 208 aa13.83□□□□□ -0.19
UBE2D3-209ENST00000394804 PHAXQ9H814 394 aaKnown RBP13.83□□□□□ -0.19
UBE2D3-209ENST00000394804 SSH2Q76I76 1423 aa13.83□□□□□ -0.2
UBE2D3-209ENST00000394804 EPB41L2O43491 1005 aaKnown RBP13.83□□□□□ -0.2
UBE2D3-209ENST00000394804 HYPKQ9NX55 129 aa13.83□□□□□ -0.2
UBE2D3-209ENST00000394804 HOXC9P31274 260 aa13.83□□□□□ -0.2
UBE2D3-209ENST00000394804 LARP1Q6PKG0 1096 aaKnown RBP13.83□□□□□ -0.2
UBE2D3-209ENST00000394804 GPT2Q8TD30 523 aa13.83□□□□□ -0.2
UBE2D3-209ENST00000394804 STRCQ7RTU9 1775 aa13.82□□□□□ -0.2
UBE2D3-209ENST00000394804 SHPRHQ149N8 1683 aa13.82□□□□□ -0.2
UBE2D3-209ENST00000394804 CEBPZQ03701 1054 aaKnown RBP13.82□□□□□ -0.2
UBE2D3-209ENST00000394804 GIMAP6Q6P9H5 292 aa13.82□□□□□ -0.2
UBE2D3-209ENST00000394804 CPLX2Q6PUV4 134 aaKnown RBP13.82□□□□□ -0.2
UBE2D3-209ENST00000394804 CLEC17AQ6ZS10 378 aa13.82□□□□□ -0.2
UBE2D3-209ENST00000394804 SDF4Q9BRK5 362 aa13.82□□□□□ -0.2
UBE2D3-209ENST00000394804 CFAP45Q9UL16 551 aa13.82□□□□□ -0.2
UBE2D3-209ENST00000394804 PALD1Q9ULE6 856 aa13.82□□□□□ -0.2
UBE2D3-209ENST00000394804 SGSM2O43147 1006 aa13.82□□□□□ -0.2
UBE2D3-209ENST00000394804 CAMK4Q16566 473 aa13.82□□□□□ -0.2
UBE2D3-209ENST00000394804 NCOA3Q9Y6Q9 1424 aa13.82□□□□□ -0.2
UBE2D3-209ENST00000394804 RAD50Q92878 1312 aa13.81□□□□□ -0.2
UBE2D3-209ENST00000394804 ALDH1L1O75891 902 aa13.81□□□□□ -0.2
UBE2D3-209ENST00000394804 SYT1P21579 422 aa13.81□□□□□ -0.2
UBE2D3-209ENST00000394804 ZNF396Q96N95 335 aaPredicted RBP13.81□□□□□ -0.2
UBE2D3-209ENST00000394804 NAT10Q9H0A0 1025 aaKnown RBP13.81□□□□□ -0.2
UBE2D3-209ENST00000394804 COL3A1P02461 1466 aaPredicted RBP13.81□□□□□ -0.2
UBE2D3-209ENST00000394804 TATP17735 454 aaPredicted RBP13.81□□□□□ -0.2
UBE2D3-209ENST00000394804 TPD52L1Q16890 204 aaPredicted RBP13.81□□□□□ -0.2
UBE2D3-209ENST00000394804 PRR36Q9H6K5 1346 aa13.81□□□□□ -0.2
UBE2D3-209ENST00000394804 HSPA4P34932 840 aa13.81□□□□□ -0.2
UBE2D3-209ENST00000394804 RBM8AQ9Y5S9 174 aaKnown RBP13.8□□□□□ -0.2
UBE2D3-209ENST00000394804 DNM1Q05193 864 aaKnown RBP13.8□□□□□ -0.2
UBE2D3-209ENST00000394804 NECAB1Q8N987 351 aa13.8□□□□□ -0.2
UBE2D3-209ENST00000394804 FBXW7Q969H0 707 aa13.8□□□□□ -0.2
UBE2D3-209ENST00000394804 PKNOX2Q96KN3 472 aa13.8□□□□□ -0.2
UBE2D3-209ENST00000394804 USP44Q9H0E7 712 aa13.8□□□□□ -0.2
UBE2D3-209ENST00000394804 SNX14Q9Y5W7 946 aa13.8□□□□□ -0.2
UBE2D3-209ENST00000394804 DDIT3P35638 169 aa13.79□□□□□ -0.2
UBE2D3-209ENST00000394804 TERF1P54274 439 aa13.79□□□□□ -0.2
UBE2D3-209ENST00000394804 PRIMPOLQ96LW4 560 aa13.79□□□□□ -0.2
UBE2D3-209ENST00000394804 DDX19AQ9NUU7 478 aaKnown RBP13.79□□□□□ -0.2
UBE2D3-209ENST00000394804 ARHGEF28Q8N1W1 1705 aaKnown RBP13.79□□□□□ -0.2
UBE2D3-209ENST00000394804 SYNE3Q6ZMZ3 975 aa13.79□□□□□ -0.2
UBE2D3-209ENST00000394804 RALYLQ86SE5 291 aaKnown RBP13.79□□□□□ -0.2
UBE2D3-209ENST00000394804 SSH3Q8TE77 659 aa13.79□□□□□ -0.2
UBE2D3-209ENST00000394804 CHAMP1Q96JM3 812 aa13.79□□□□□ -0.2
UBE2D3-209ENST00000394804 STAP2Q9UGK3 403 aa13.79□□□□□ -0.2
UBE2D3-209ENST00000394804 VPS53Q5VIR6 699 aa13.79□□□□□ -0.2
UBE2D3-209ENST00000394804 PTPRUQ92729 1446 aa13.79□□□□□ -0.2
UBE2D3-209ENST00000394804 TRDNQ13061 729 aa13.79□□□□□ -0.2
UBE2D3-209ENST00000394804 WASHC4Q2M389 1173 aa13.79□□□□□ -0.2
UBE2D3-209ENST00000394804 DDX11Q96FC9 970 aa13.79□□□□□ -0.2
UBE2D3-209ENST00000394804 ZNF830Q96NB3 372 aaPredicted RBP13.79□□□□□ -0.2
UBE2D3-209ENST00000394804 CUL4AQ13619 759 aa13.78□□□□□ -0.2
UBE2D3-209ENST00000394804 NOLC1Q14978 699 aaKnown RBP eCLIP13.78□□□□□ -0.2
UBE2D3-209ENST00000394804 KSR2Q6VAB6 950 aa13.78□□□□□ -0.2
UBE2D3-209ENST00000394804 CKAP2LQ8IYA6 745 aa13.78□□□□□ -0.2
UBE2D3-209ENST00000394804 CCDC34Q96HJ3 373 aa13.78□□□□□ -0.2
UBE2D3-209ENST00000394804 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.78□□□□□ -0.24e-6■□□□□ 11
UBE2D3-209ENST00000394804 ERBB4Q15303 1308 aa13.78□□□□□ -0.2
UBE2D3-209ENST00000394804 AKAP4Q5JQC9 854 aa13.78□□□□□ -0.2
UBE2D3-209ENST00000394804 HMG20BQ9P0W2 317 aa13.78□□□□□ -0.2
UBE2D3-209ENST00000394804 TFIP11Q9UBB9 837 aaKnown RBP13.78□□□□□ -0.2
UBE2D3-209ENST00000394804 RGS12O14924 1447 aa13.78□□□□□ -0.2
UBE2D3-209ENST00000394804 GADD45BO75293 160 aaPredicted RBP13.78□□□□□ -0.2
UBE2D3-209ENST00000394804 HOXB7P09629 217 aa13.78□□□□□ -0.2
UBE2D3-209ENST00000394804 TTC12Q9H892 705 aaPredicted RBP13.78□□□□□ -0.2
UBE2D3-209ENST00000394804 PA2G4Q9UQ80 394 aaKnown RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms