RNA–Protein interactions for RNA: ENST00000394555.6

EFEMP1-202, Transcript of EGF containing fibulin extracellular matrix protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFEMP1, Length 3,024 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1-202ENST00000394555 TUBGCP6Q96RT7 1819 aa19.53■□□□□ 0.72
EFEMP1-202ENST00000394555 TNNT1P13805 278 aa19.53■□□□□ 0.72
EFEMP1-202ENST00000394555 KRT85P78386 507 aa19.53■□□□□ 0.72
EFEMP1-202ENST00000394555 DLC1Q96QB1 1528 aa19.53■□□□□ 0.72
EFEMP1-202ENST00000394555 ACEP12821 1306 aa19.53■□□□□ 0.72
EFEMP1-202ENST00000394555 RAB11FIP3O75154 756 aa19.53■□□□□ 0.72
EFEMP1-202ENST00000394555 CDC37L1Q7L3B6 337 aa19.53■□□□□ 0.72
EFEMP1-202ENST00000394555 KIF1BPQ96EK5 621 aa19.53■□□□□ 0.72
EFEMP1-202ENST00000394555 TCEANC2Q96MN5 208 aa19.53■□□□□ 0.72
EFEMP1-202ENST00000394555 MLECQ14165 292 aa19.52■□□□□ 0.72
EFEMP1-202ENST00000394555 CBX8Q9HC52 389 aa19.52■□□□□ 0.72
EFEMP1-202ENST00000394555 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.52■□□□□ 0.72
EFEMP1-202ENST00000394555 EIF2S2P20042 333 aaKnown RBP19.52■□□□□ 0.72
EFEMP1-202ENST00000394555 NBPF7P0C2Y1 421 aaPredicted RBP19.51■□□□□ 0.71
EFEMP1-202ENST00000394555 ST3GAL1Q11201 340 aa19.51■□□□□ 0.71
EFEMP1-202ENST00000394555 VPS53Q5VIR6 699 aa19.51■□□□□ 0.71
EFEMP1-202ENST00000394555 TPD52L1Q16890 204 aaPredicted RBP19.51■□□□□ 0.71
EFEMP1-202ENST00000394555 TPCN1Q9ULQ1 816 aa19.5■□□□□ 0.71
EFEMP1-202ENST00000394555 HDGFL1Q5TGJ6 251 aa19.5■□□□□ 0.71
EFEMP1-202ENST00000394555 ZSCAN31Q96LW9 406 aaPredicted RBP19.5■□□□□ 0.71
EFEMP1-202ENST00000394555 EYA1Q99502 592 aa19.5■□□□□ 0.71
EFEMP1-202ENST00000394555 SH2B1Q9NRF2 756 aaPredicted RBP19.5■□□□□ 0.71
EFEMP1-202ENST00000394555 AMPHP49418 695 aa19.49■□□□□ 0.71
EFEMP1-202ENST00000394555 COL9A3Q14050 684 aaPredicted RBP19.49■□□□□ 0.71
EFEMP1-202ENST00000394555 ZSCAN25Q6NSZ9 544 aa19.49■□□□□ 0.71
EFEMP1-202ENST00000394555 CCDC112Q8NEF3 446 aa19.49■□□□□ 0.71
EFEMP1-202ENST00000394555 RUFY2Q8WXA3 655 aa19.49■□□□□ 0.71
EFEMP1-202ENST00000394555 SPATA32Q96LK8 384 aa19.49■□□□□ 0.71
EFEMP1-202ENST00000394555 FEZ1Q99689 392 aa19.49■□□□□ 0.71
EFEMP1-202ENST00000394555 OGFRQ9NZT2 677 aa19.49■□□□□ 0.71
EFEMP1-202ENST00000394555 RIMS1Q86UR5 1692 aaKnown RBP19.48■□□□□ 0.71
EFEMP1-202ENST00000394555 ARHGEF10O15013 1369 aa19.48■□□□□ 0.71
EFEMP1-202ENST00000394555 ZKSCAN1P17029 563 aaPredicted RBP19.48■□□□□ 0.71
EFEMP1-202ENST00000394555 STK3Q13188 491 aa19.48■□□□□ 0.71
EFEMP1-202ENST00000394555 DNAJC25Q9H1X3 360 aa19.48■□□□□ 0.71
EFEMP1-202ENST00000394555 ZSWIM6Q9HCJ5 1215 aa19.48■□□□□ 0.71
EFEMP1-202ENST00000394555 SMTNL1A8MU46 457 aa19.48■□□□□ 0.71
EFEMP1-202ENST00000394555 ZNF75DP51815 510 aa19.47■□□□□ 0.71
EFEMP1-202ENST00000394555 CLIP2Q9UDT6 1046 aa19.47■□□□□ 0.71
EFEMP1-202ENST00000394555 GLRX3O76003 335 aaKnown RBP19.47■□□□□ 0.71
EFEMP1-202ENST00000394555 POLA2Q14181 598 aa19.47■□□□□ 0.71
EFEMP1-202ENST00000394555 BICD2Q8TD16 824 aa19.47■□□□□ 0.71
EFEMP1-202ENST00000394555 GNAT3A8MTJ3 354 aa19.46■□□□□ 0.71
EFEMP1-202ENST00000394555 ZNF165P49910 485 aa19.46■□□□□ 0.71
EFEMP1-202ENST00000394555 CACTINQ8WUQ7 758 aaKnown RBP19.46■□□□□ 0.71
EFEMP1-202ENST00000394555 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.46■□□□□ 0.71
EFEMP1-202ENST00000394555 CTNNA3Q9UI47 895 aa19.46■□□□□ 0.71
EFEMP1-202ENST00000394555 V9GYY5 206 aaPredicted RBP19.46■□□□□ 0.71
EFEMP1-202ENST00000394555 TAF7Q15545 349 aaPredicted RBP19.46■□□□□ 0.71
EFEMP1-202ENST00000394555 LTV1Q96GA3 475 aaPredicted RBP19.46■□□□□ 0.71
EFEMP1-202ENST00000394555 RBM8AQ9Y5S9 174 aaKnown RBP19.46■□□□□ 0.71
EFEMP1-202ENST00000394555 NRKQ7Z2Y5 1582 aa19.45■□□□□ 0.7
EFEMP1-202ENST00000394555 A2ML1A8K2U0 1454 aa19.45■□□□□ 0.7
EFEMP1-202ENST00000394555 NR1I2O75469 434 aa19.45■□□□□ 0.7
EFEMP1-202ENST00000394555 ANXA1P04083 346 aa19.45■□□□□ 0.7
EFEMP1-202ENST00000394555 CCDC144BQ3MJ40 725 aa19.45■□□□□ 0.7
EFEMP1-202ENST00000394555 CCDC144CPQ8IYA2 1237 aa19.45■□□□□ 0.7
EFEMP1-202ENST00000394555 CLASRPQ8N2M8 674 aaKnown RBP19.45■□□□□ 0.7
EFEMP1-202ENST00000394555 IL17REQ8NFR9 667 aa19.45■□□□□ 0.7
EFEMP1-202ENST00000394555 CGNQ9P2M7 1197 aaKnown RBP19.45■□□□□ 0.7
EFEMP1-202ENST00000394555 RIMBP3CA6NJZ7 1639 aa19.45■□□□□ 0.7
EFEMP1-202ENST00000394555 RIMBP3BA6NNM3 1639 aa19.45■□□□□ 0.7
EFEMP1-202ENST00000394555 RIMBP3Q9UFD9 1639 aa19.45■□□□□ 0.7
EFEMP1-202ENST00000394555 LARP1Q6PKG0 1096 aaKnown RBP19.44■□□□□ 0.7
EFEMP1-202ENST00000394555 MON2Q7Z3U7 1717 aa19.44■□□□□ 0.7
EFEMP1-202ENST00000394555 C3P01024 1663 aa19.44■□□□□ 0.7
EFEMP1-202ENST00000394555 CREB3L3Q68CJ9 461 aa19.44■□□□□ 0.7
EFEMP1-202ENST00000394555 FAM227BQ96M60 508 aa19.44■□□□□ 0.7
EFEMP1-202ENST00000394555 ARID5BQ14865 1188 aa19.43■□□□□ 0.7
EFEMP1-202ENST00000394555 IFIT2P09913 472 aaKnown RBP19.43■□□□□ 0.7
EFEMP1-202ENST00000394555 PLA2G4DQ86XP0 818 aa19.43■□□□□ 0.7
EFEMP1-202ENST00000394555 PI4KAP2A4QPH2 592 aa19.43■□□□□ 0.7
EFEMP1-202ENST00000394555 NECTIN1Q15223 517 aa19.43■□□□□ 0.7
EFEMP1-202ENST00000394555 CEP135Q66GS9 1140 aa19.43■□□□□ 0.7
EFEMP1-202ENST00000394555 PI4KAP1Q8N8J0 262 aa19.43■□□□□ 0.7
EFEMP1-202ENST00000394555 SCAND2PQ9GZW5 306 aaPredicted RBP19.43■□□□□ 0.7
EFEMP1-202ENST00000394555 PA2G4Q9UQ80 394 aaKnown RBP19.43■□□□□ 0.7
EFEMP1-202ENST00000394555 PEAK1Q9H792 1746 aa19.42■□□□□ 0.7
EFEMP1-202ENST00000394555 NEO1Q92859 1461 aa19.42■□□□□ 0.7
EFEMP1-202ENST00000394555 CEBPZQ03701 1054 aaKnown RBP19.42■□□□□ 0.7
EFEMP1-202ENST00000394555 LEO1Q8WVC0 666 aaPredicted RBP19.42■□□□□ 0.7
EFEMP1-202ENST00000394555 TM6SF1Q9BZW5 370 aa19.42■□□□□ 0.7
EFEMP1-202ENST00000394555 PPP6R1Q9UPN7 881 aa19.42■□□□□ 0.7
EFEMP1-202ENST00000394555 PAXBP1Q9Y5B6 917 aa19.42■□□□□ 0.7
EFEMP1-202ENST00000394555 CCDC171Q6TFL3 1326 aa19.42■□□□□ 0.7
EFEMP1-202ENST00000394555 PDCP20941 246 aa19.42■□□□□ 0.7
EFEMP1-202ENST00000394555 ECHDC1Q9NTX5 307 aa19.42■□□□□ 0.7
EFEMP1-202ENST00000394555 OVOS2A0A0J9YW53 1432 aa19.41■□□□□ 0.7
EFEMP1-202ENST00000394555 OVOS2Q6IE36 1432 aa19.41■□□□□ 0.7
EFEMP1-202ENST00000394555 USP27XA6NNY8 438 aa19.41■□□□□ 0.7
EFEMP1-202ENST00000394555 DDX11Q96FC9 970 aa19.41■□□□□ 0.7
EFEMP1-202ENST00000394555 CLSTN2Q9H4D0 955 aa19.41■□□□□ 0.7
EFEMP1-202ENST00000394555 DDX19AQ9NUU7 478 aaKnown RBP19.41■□□□□ 0.7
EFEMP1-202ENST00000394555 NPHP1O15259 732 aa19.41■□□□□ 0.7
EFEMP1-202ENST00000394555 HSP90AB4PQ58FF6 505 aa19.41■□□□□ 0.7
EFEMP1-202ENST00000394555 NUTM2GQ5VZR2 741 aa19.41■□□□□ 0.7
EFEMP1-202ENST00000394555 TRMT1Q9NXH9 659 aaKnown RBP19.41■□□□□ 0.7
EFEMP1-202ENST00000394555 ELP1O95163 1332 aa19.41■□□□□ 0.7
EFEMP1-202ENST00000394555 TAF6LQ9Y6J9 622 aa19.41■□□□□ 0.7
EFEMP1-202ENST00000394555 MAP3K5Q99683 1374 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms