RNA–Protein interactions for RNA: ENST00000394121.8

THRA-202, Transcript of thyroid hormone receptor alpha, humanhuman

TSL 2 BASIC

Gene THRA, Length 2,260 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THRA-202ENST00000394121 ZSCAN30Q86W11 494 aa28.22■■■□□ 2.11
THRA-202ENST00000394121 RBSNQ9H1K0 784 aa28.22■■■□□ 2.11
THRA-202ENST00000394121 OVOS2A0A0G2JMS6 1433 aa28.21■■■□□ 2.11
THRA-202ENST00000394121 PRIM1P49642 420 aaKnown RBP28.21■■■□□ 2.11
THRA-202ENST00000394121 SSH3Q8TE77 659 aa28.21■■■□□ 2.11
THRA-202ENST00000394121 C8orf37Q96NL8 207 aa28.21■■■□□ 2.11
THRA-202ENST00000394121 RBM27Q9P2N5 1060 aaKnown RBP28.21■■■□□ 2.11
THRA-202ENST00000394121 KCNQ3O43525 872 aa28.2■■■□□ 2.1
THRA-202ENST00000394121 UNC5CLQ8IV45 518 aa28.2■■■□□ 2.1
THRA-202ENST00000394121 MBD3O95983 291 aa28.19■■■□□ 2.1
THRA-202ENST00000394121 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.19■■■□□ 2.1
THRA-202ENST00000394121 RAB11FIP3O75154 756 aa28.18■■■□□ 2.1
THRA-202ENST00000394121 HS1BP3Q53T59 392 aa28.18■■■□□ 2.1
THRA-202ENST00000394121 ZCRB1Q8TBF4 217 aaKnown RBP28.18■■■□□ 2.1
THRA-202ENST00000394121 TMEM63CQ9P1W3 806 aa28.18■■■□□ 2.1
THRA-202ENST00000394121 KDM6AO15550 1401 aaPredicted RBP28.18■■■□□ 2.1
THRA-202ENST00000394121 TEFQ10587 303 aa28.18■■■□□ 2.1
THRA-202ENST00000394121 HDGFL1Q5TGJ6 251 aa28.18■■■□□ 2.1
THRA-202ENST00000394121 LRSAM1Q6UWE0 723 aa28.18■■■□□ 2.1
THRA-202ENST00000394121 IFNL2Q8IZJ0 200 aa28.18■■■□□ 2.1
THRA-202ENST00000394121 DDX54Q8TDD1 881 aaKnown RBP28.18■■■□□ 2.1
THRA-202ENST00000394121 CHAMP1Q96JM3 812 aa28.17■■■□□ 2.1
THRA-202ENST00000394121 FOXD4L5Q5VV16 416 aaPredicted RBP28.16■■■□□ 2.1
THRA-202ENST00000394121 FOXD4L4Q8WXT5 416 aaPredicted RBP28.16■■■□□ 2.1
THRA-202ENST00000394121 PDLIM2Q96JY6 352 aa28.16■■■□□ 2.1
THRA-202ENST00000394121 POLA2Q14181 598 aa28.16■■■□□ 2.1
THRA-202ENST00000394121 IL1RAPL2Q9NP60 686 aa28.16■■■□□ 2.1
THRA-202ENST00000394121 LRP6O75581 1613 aa28.16■■■□□ 2.1
THRA-202ENST00000394121 PLCH1Q4KWH8 1693 aa28.15■■■□□ 2.1
THRA-202ENST00000394121 PHAXQ9H814 394 aaKnown RBP28.15■■■□□ 2.1
THRA-202ENST00000394121 NGLY1Q96IV0 654 aa28.15■■■□□ 2.1
THRA-202ENST00000394121 NSFL1CQ9UNZ2 370 aaKnown RBP28.15■■■□□ 2.1
THRA-202ENST00000394121 MSNP26038 577 aaKnown RBP28.14■■■□□ 2.1
THRA-202ENST00000394121 HSPA4P34932 840 aa28.13■■■□□ 2.09
THRA-202ENST00000394121 PPP1R42Q7Z4L9 355 aa28.13■■■□□ 2.09
THRA-202ENST00000394121 BTBD11A6QL63 1104 aa28.13■■■□□ 2.09
THRA-202ENST00000394121 SURF6O75683 361 aaKnown RBP28.12■■■□□ 2.09
THRA-202ENST00000394121 NOL8Q76FK4 1167 aaKnown RBP28.12■■■□□ 2.09
THRA-202ENST00000394121 NUTM1Q86Y26 1132 aa28.12■■■□□ 2.09
THRA-202ENST00000394121 NFATC2IPQ8NCF5 419 aa28.12■■■□□ 2.09
THRA-202ENST00000394121 SYCE3A1L190 88 aa28.12■■■□□ 2.09
THRA-202ENST00000394121 CCDC9Q9Y3X0 531 aaKnown RBP28.12■■■□□ 2.09
THRA-202ENST00000394121 RHPN1Q8TCX5 695 aa28.11■■■□□ 2.09
THRA-202ENST00000394121 UPF3BQ9BZI7 483 aaKnown RBP28.11■■■□□ 2.09
THRA-202ENST00000394121 IL25Q9H293 177 aa28.11■■■□□ 2.09
THRA-202ENST00000394121 SLIT2O94813 1529 aa28.11■■■□□ 2.09
THRA-202ENST00000394121 PKD1L3Q7Z443 1732 aa28.11■■■□□ 2.09
THRA-202ENST00000394121 SLC39A6Q13433 755 aa28.1■■■□□ 2.09
THRA-202ENST00000394121 PI4K2BQ8TCG2 481 aa28.1■■■□□ 2.09
THRA-202ENST00000394121 PCDH11XQ9BZA7 1347 aa28.1■■■□□ 2.09
THRA-202ENST00000394121 PCDH11YQ9BZA8 1340 aa28.1■■■□□ 2.09
THRA-202ENST00000394121 KIF1BPQ96EK5 621 aa28.09■■■□□ 2.09
THRA-202ENST00000394121 SPATA31A1Q5TZJ5 1347 aa28.09■■■□□ 2.09
THRA-202ENST00000394121 DCAF5Q96JK2 942 aa28.09■■■□□ 2.09
THRA-202ENST00000394121 UBE2Q2Q8WVN8 375 aa28.08■■■□□ 2.09
THRA-202ENST00000394121 HOXB7P09629 217 aa28.08■■■□□ 2.09
THRA-202ENST00000394121 CHMP4AQ9BY43 222 aa28.08■■■□□ 2.09
THRA-202ENST00000394121 SLC52A2Q9HAB3 445 aa28.08■■■□□ 2.09
THRA-202ENST00000394121 SPATA31A6Q5VVP1 1343 aa28.08■■■□□ 2.08
THRA-202ENST00000394121 PARP4Q9UKK3 1724 aaKnown RBP28.07■■■□□ 2.08
THRA-202ENST00000394121 NOL7Q9UMY1 257 aaKnown RBP28.07■■■□□ 2.08
THRA-202ENST00000394121 NRAPQ86VF7 1730 aa28.07■■■□□ 2.08
THRA-202ENST00000394121 SGSM2O43147 1006 aa28.07■■■□□ 2.08
THRA-202ENST00000394121 SRGAP3O43295 1099 aa28.07■■■□□ 2.08
THRA-202ENST00000394121 EIF4A1P60842 406 aaKnown RBP28.07■■■□□ 2.08
THRA-202ENST00000394121 DISP2A7MBM2 1401 aa28.07■■■□□ 2.08
THRA-202ENST00000394121 RAD50Q92878 1312 aa28.06■■■□□ 2.08
THRA-202ENST00000394121 TPM2P07951 284 aa28.06■■■□□ 2.08
THRA-202ENST00000394121 WDR33Q9C0J8 1336 aaKnown RBP28.06■■■□□ 2.08
THRA-202ENST00000394121 OFD1O75665 1012 aa28.06■■■□□ 2.08
THRA-202ENST00000394121 EIF2S2P20042 333 aaKnown RBP28.06■■■□□ 2.08
THRA-202ENST00000394121 BCL9LQ86UU0 1499 aa28.05■■■□□ 2.08
THRA-202ENST00000394121 BEND3Q5T5X7 828 aa28.05■■■□□ 2.08
THRA-202ENST00000394121 CNTROBQ8N137 903 aa28.05■■■□□ 2.08
THRA-202ENST00000394121 SYAP1Q96A49 352 aaPredicted RBP28.05■■■□□ 2.08
THRA-202ENST00000394121 KDM3BQ7LBC6 1761 aa28.05■■■□□ 2.08
THRA-202ENST00000394121 MAP4K4O95819 1239 aaPredicted RBP28.04■■■□□ 2.08
THRA-202ENST00000394121 DNAAF4Q8WXU2 420 aa28.04■■■□□ 2.08
THRA-202ENST00000394121 SPATA31A5Q5VU36 1347 aa28.04■■■□□ 2.08
THRA-202ENST00000394121 SPATA31A7Q8IWB4 1347 aa28.04■■■□□ 2.08
THRA-202ENST00000394121 PRAMEF22A3QJZ6 481 aa28.04■■■□□ 2.08
THRA-202ENST00000394121 NBPF7P0C2Y1 421 aaPredicted RBP28.04■■■□□ 2.08
THRA-202ENST00000394121 HSP90AB4PQ58FF6 505 aa28.04■■■□□ 2.08
THRA-202ENST00000394121 ADAMTS7Q9UKP4 1686 aa28.03■■■□□ 2.08
THRA-202ENST00000394121 PLEKHG2Q9H7P9 1386 aa28.03■■■□□ 2.08
THRA-202ENST00000394121 PDZRN4Q6ZMN7 1036 aaPredicted RBP28.02■■■□□ 2.08
THRA-202ENST00000394121 CHPF2Q9P2E5 772 aa28.02■■■□□ 2.08
THRA-202ENST00000394121 SNX14Q9Y5W7 946 aa28.02■■■□□ 2.08
THRA-202ENST00000394121 SHANK3Q9BYB0 1731 aa28.02■■■□□ 2.08
THRA-202ENST00000394121 CABP4P57796 275 aa28.02■■■□□ 2.08
THRA-202ENST00000394121 MEX3CQ5U5Q3 659 aaKnown RBP28.02■■■□□ 2.08
THRA-202ENST00000394121 LSG1Q9H089 658 aaKnown RBP28.02■■■□□ 2.08
THRA-202ENST00000394121 PI4KAP2A4QPH2 592 aa28.01■■■□□ 2.07
THRA-202ENST00000394121 ZNF500O60304 480 aaPredicted RBP28.01■■■□□ 2.07
THRA-202ENST00000394121 KIAA1211Q6ZU35 1233 aa28.01■■■□□ 2.07
THRA-202ENST00000394121 FNBP4Q8N3X1 1017 aaPredicted RBP28.01■■■□□ 2.07
THRA-202ENST00000394121 PI4KAP1Q8N8J0 262 aa28.01■■■□□ 2.07
THRA-202ENST00000394121 USP42Q9H9J4 1324 aaKnown RBP28.01■■■□□ 2.07
THRA-202ENST00000394121 RRP9O43818 475 aaKnown RBP28.01■■■□□ 2.07
THRA-202ENST00000394121 TTC14Q96N46 770 aa28■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms