RNA–Protein interactions for RNA: ENST00000393794.4

POLR2J-202, Transcript of RNA polymerase II subunit J, humanhuman

TSL 1 (best) BASIC

Gene POLR2J, Length 784 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J-202ENST00000393794 FMNL2Q96PY5 1086 aa26.8■■□□□ 1.88
POLR2J-202ENST00000393794 SETDB2Q96T68 719 aa26.8■■□□□ 1.88
POLR2J-202ENST00000393794 KLRG2A4D1S0 409 aaPredicted RBP26.79■■□□□ 1.88
POLR2J-202ENST00000393794 CNBD1Q8NA66 436 aa26.79■■□□□ 1.88
POLR2J-202ENST00000393794 MASTLQ96GX5 879 aa26.79■■□□□ 1.88
POLR2J-202ENST00000393794 NPC1L1Q9UHC9 1359 aa26.79■■□□□ 1.88
POLR2J-202ENST00000393794 SCN4AP35499 1836 aa26.79■■□□□ 1.88
POLR2J-202ENST00000393794 SOGA3Q5TF21 947 aa26.78■■□□□ 1.88
POLR2J-202ENST00000393794 CACNA1SQ13698 1873 aa26.77■■□□□ 1.88
POLR2J-202ENST00000393794 KCNQ3O43525 872 aa26.77■■□□□ 1.88
POLR2J-202ENST00000393794 CNTNAP1P78357 1384 aa26.76■■□□□ 1.87
POLR2J-202ENST00000393794 CLEC4GQ6UXB4 293 aa26.76■■□□□ 1.87
POLR2J-202ENST00000393794 MKRN1Q9UHC7 482 aaKnown RBP26.76■■□□□ 1.87
POLR2J-202ENST00000393794 ITGBL1O95965 494 aaPredicted RBP26.75■■□□□ 1.87
POLR2J-202ENST00000393794 CC2D1BQ5T0F9 858 aaKnown RBP26.75■■□□□ 1.87
POLR2J-202ENST00000393794 TAF1DQ9H5J8 278 aaPredicted RBP26.75■■□□□ 1.87
POLR2J-202ENST00000393794 USP16Q9Y5T5 823 aa26.75■■□□□ 1.87
POLR2J-202ENST00000393794 ST5P78524 1137 aa26.74■■□□□ 1.87
POLR2J-202ENST00000393794 LDHDQ86WU2 507 aa26.74■■□□□ 1.87
POLR2J-202ENST00000393794 DZIP3Q86Y13 1208 aaKnown RBP26.74■■□□□ 1.87
POLR2J-202ENST00000393794 ZNF330Q9Y3S2 320 aaPredicted RBP26.74■■□□□ 1.87
POLR2J-202ENST00000393794 PHACTR3Q96KR7 559 aa26.73■■□□□ 1.87
POLR2J-202ENST00000393794 ADAMTSL1Q8N6G6 1762 aa26.72■■□□□ 1.87
POLR2J-202ENST00000393794 IQCA1LA6NCM1 817 aa26.72■■□□□ 1.87
POLR2J-202ENST00000393794 RGL2O15211 777 aa26.72■■□□□ 1.87
POLR2J-202ENST00000393794 FOXN1O15353 648 aa26.71■■□□□ 1.87
POLR2J-202ENST00000393794 PRDM10Q9NQV6 1147 aa26.71■■□□□ 1.87
POLR2J-202ENST00000393794 BTBD11A6QL63 1104 aa26.7■■□□□ 1.86
POLR2J-202ENST00000393794 PRAMEF22A3QJZ6 481 aa26.69■■□□□ 1.86
POLR2J-202ENST00000393794 U2SURPO15042 1029 aaKnown RBP26.69■■□□□ 1.86
POLR2J-202ENST00000393794 NPR1P16066 1061 aa26.69■■□□□ 1.86
POLR2J-202ENST00000393794 CCDC93Q567U6 631 aa26.69■■□□□ 1.86
POLR2J-202ENST00000393794 SNED1Q8TER0 1413 aa26.68■■□□□ 1.86
POLR2J-202ENST00000393794 FKBP4Q02790 459 aaKnown RBP eCLIP26.68■■□□□ 1.86
POLR2J-202ENST00000393794 RSPH6AQ9H0K4 717 aa26.68■■□□□ 1.86
POLR2J-202ENST00000393794 NBPF5PQ86XG9 351 aaPredicted RBP26.67■■□□□ 1.86
POLR2J-202ENST00000393794 ZNF541Q9H0D2 1346 aa26.66■■□□□ 1.86
POLR2J-202ENST00000393794 NBPF26B4DH59 902 aa26.66■■□□□ 1.86
POLR2J-202ENST00000393794 PIP4K2AP48426 406 aaPredicted RBP26.66■■□□□ 1.86
POLR2J-202ENST00000393794 VEGFBP49765 207 aa26.66■■□□□ 1.86
POLR2J-202ENST00000393794 NBPF10Q6P3W6 841 aaKnown RBP26.66■■□□□ 1.86
POLR2J-202ENST00000393794 NPM2Q86SE8 214 aaKnown RBP26.66■■□□□ 1.86
POLR2J-202ENST00000393794 NBPF15Q8N660 670 aa26.66■■□□□ 1.86
POLR2J-202ENST00000393794 TMEM88BA6NKF7 163 aa26.65■■□□□ 1.86
POLR2J-202ENST00000393794 WBP1LQ9NX94 342 aa26.65■■□□□ 1.86
POLR2J-202ENST00000393794 FZD9O00144 591 aa26.64■■□□□ 1.86
POLR2J-202ENST00000393794 SNRPA1P09661 255 aaKnown RBP26.64■■□□□ 1.86
POLR2J-202ENST00000393794 OLFM4Q6UX06 510 aa26.64■■□□□ 1.86
POLR2J-202ENST00000393794 ZNF277Q9NRM2 450 aaPredicted RBP26.64■■□□□ 1.86
POLR2J-202ENST00000393794 NPHP1O15259 732 aa26.63■■□□□ 1.85
POLR2J-202ENST00000393794 PRKAR2BP31323 418 aa26.63■■□□□ 1.85
POLR2J-202ENST00000393794 TPTE2Q6XPS3 522 aa26.63■■□□□ 1.85
POLR2J-202ENST00000393794 RTKN2Q8IZC4 609 aa26.63■■□□□ 1.85
POLR2J-202ENST00000393794 HACL1Q9UJ83 578 aa26.62■■□□□ 1.85
POLR2J-202ENST00000393794 ZNF652Q9Y2D9 606 aa26.62■■□□□ 1.85
POLR2J-202ENST00000393794 RASSF10A6NK89 507 aa26.6■■□□□ 1.85
POLR2J-202ENST00000393794 EPHX2P34913 555 aa26.6■■□□□ 1.85
POLR2J-202ENST00000393794 CTCFP49711 727 aaPredicted RBP26.6■■□□□ 1.85
POLR2J-202ENST00000393794 NIP7Q9Y221 180 aaKnown RBP eCLIP26.6■■□□□ 1.85
POLR2J-202ENST00000393794 IARSP41252 1262 aaKnown RBP26.58■■□□□ 1.85
POLR2J-202ENST00000393794 CRY2Q49AN0 593 aa26.58■■□□□ 1.85
POLR2J-202ENST00000393794 PNMA8AQ86V59 439 aaPredicted RBP26.58■■□□□ 1.85
POLR2J-202ENST00000393794 ALDH1B1P30837 517 aa26.57■■□□□ 1.84
POLR2J-202ENST00000393794 HLFQ16534 295 aa26.57■■□□□ 1.84
POLR2J-202ENST00000393794 MCM10Q7L590 875 aa26.57■■□□□ 1.84
POLR2J-202ENST00000393794 GPC2Q8N158 579 aa26.57■■□□□ 1.84
POLR2J-202ENST00000393794 SYNE4Q8N205 404 aa26.57■■□□□ 1.84
POLR2J-202ENST00000393794 PSMD1Q99460 953 aa26.57■■□□□ 1.84
POLR2J-202ENST00000393794 EAPPQ56P03 285 aaPredicted RBP26.56■■□□□ 1.84
POLR2J-202ENST00000393794 CNTROBQ8N137 903 aa26.56■■□□□ 1.84
POLR2J-202ENST00000393794 COL4A5P29400 1685 aa26.55■■□□□ 1.84
POLR2J-202ENST00000393794 HTATSF1O43719 755 aaKnown RBP26.55■■□□□ 1.84
POLR2J-202ENST00000393794 RNF123Q5XPI4 1314 aa26.55■■□□□ 1.84
POLR2J-202ENST00000393794 DEFB115Q30KQ5 88 aa26.54■■□□□ 1.84
POLR2J-202ENST00000393794 MAP1SQ66K74 1059 aaPredicted RBP26.54■■□□□ 1.84
POLR2J-202ENST00000393794 CCER1Q8TC90 406 aaPredicted RBP26.53■■□□□ 1.84
POLR2J-202ENST00000393794 LTBP1Q14766 1721 aa26.53■■□□□ 1.84
POLR2J-202ENST00000393794 HOXA10P31260 410 aaPredicted RBP26.52■■□□□ 1.84
POLR2J-202ENST00000393794 LBX1P52954 281 aa26.52■■□□□ 1.84
POLR2J-202ENST00000393794 AIDAQ96BJ3 306 aa26.52■■□□□ 1.84
POLR2J-202ENST00000393794 CLEC11AQ9Y240 323 aa26.52■■□□□ 1.84
POLR2J-202ENST00000393794 ABCC12Q96J65 1359 aa26.51■■□□□ 1.83
POLR2J-202ENST00000393794 HSPA8P11142 646 aaKnown RBP26.51■■□□□ 1.83
POLR2J-202ENST00000393794 DCTN1Q14203 1278 aa26.51■■□□□ 1.83
POLR2J-202ENST00000393794 CC2D2BQ6DHV5 1058 aa26.51■■□□□ 1.83
POLR2J-202ENST00000393794 RIC1Q4ADV7 1423 aa26.5■■□□□ 1.83
POLR2J-202ENST00000393794 ERVV-1B6SEH8 477 aa26.5■■□□□ 1.83
POLR2J-202ENST00000393794 RTF1Q92541 710 aaKnown RBP26.5■■□□□ 1.83
POLR2J-202ENST00000393794 CFAP53Q96M91 514 aa26.5■■□□□ 1.83
POLR2J-202ENST00000393794 NUP98P52948 1817 aa26.5■■□□□ 1.83
POLR2J-202ENST00000393794 WDR33Q9C0J8 1336 aaKnown RBP26.49■■□□□ 1.83
POLR2J-202ENST00000393794 TAF7Q15545 349 aaPredicted RBP26.49■■□□□ 1.83
POLR2J-202ENST00000393794 NUDCQ9Y266 331 aa26.49■■□□□ 1.83
POLR2J-202ENST00000393794 THSD7BQ9C0I4 1608 aa26.49■■□□□ 1.83
POLR2J-202ENST00000393794 LAMB4A4D0S4 1761 aa26.48■■□□□ 1.83
POLR2J-202ENST00000393794 FAM177BA6PVY3 158 aa26.48■■□□□ 1.83
POLR2J-202ENST00000393794 DDX21Q9NR30 783 aaKnown RBP eCLIP26.48■■□□□ 1.83
POLR2J-202ENST00000393794 IBTKQ9P2D0 1353 aaPredicted RBP26.46■■□□□ 1.83
POLR2J-202ENST00000393794 U2AF1L5P0DN76 240 aaPredicted RBP26.46■■□□□ 1.83
POLR2J-202ENST00000393794 SCNN1DP51172 638 aa26.46■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms