RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 PLEKHO1Q53GL0 409 aaPredicted RBP22.68■■□□□ 1.22
CBX1-202ENST00000393408 MPRIPQ6WCQ1 1025 aa22.68■■□□□ 1.22
CBX1-202ENST00000393408 CLASRPQ8N2M8 674 aaKnown RBP22.68■■□□□ 1.22
CBX1-202ENST00000393408 RUFY2Q8WXA3 655 aa22.68■■□□□ 1.22
CBX1-202ENST00000393408 LRRC59Q96AG4 307 aaKnown RBP22.68■■□□□ 1.22
CBX1-202ENST00000393408 STX6O43752 255 aa22.67■■□□□ 1.22
CBX1-202ENST00000393408 SYT1P21579 422 aa22.67■■□□□ 1.22
CBX1-202ENST00000393408 KCNH5Q8NCM2 988 aa22.67■■□□□ 1.22
CBX1-202ENST00000393408 ECHDC1Q9NTX5 307 aa22.67■■□□□ 1.22
CBX1-202ENST00000393408 CNPY2Q9Y2B0 182 aa22.67■■□□□ 1.22
CBX1-202ENST00000393408 MAP3K2Q9Y2U5 619 aa22.67■■□□□ 1.22
CBX1-202ENST00000393408 NCAPD2Q15021 1401 aa22.67■■□□□ 1.22
CBX1-202ENST00000393408 CASTP20810 708 aaKnown RBP22.67■■□□□ 1.22
CBX1-202ENST00000393408 LARP6Q9BRS8 491 aaKnown RBP22.67■■□□□ 1.22
CBX1-202ENST00000393408 PXDNQ92626 1479 aa22.67■■□□□ 1.22
CBX1-202ENST00000393408 RNMTO43148 476 aaKnown RBP22.66■■□□□ 1.22
CBX1-202ENST00000393408 HYPKQ9NX55 129 aa22.66■■□□□ 1.22
CBX1-202ENST00000393408 OVOS2A0A0G2JMS6 1433 aa22.66■■□□□ 1.22
CBX1-202ENST00000393408 ZBTB7CA1YPR0 619 aa22.66■■□□□ 1.22
CBX1-202ENST00000393408 XPCQ01831 940 aaPredicted RBP22.66■■□□□ 1.22
CBX1-202ENST00000393408 PTH1RQ03431 593 aa22.66■■□□□ 1.22
CBX1-202ENST00000393408 KCNB2Q92953 911 aa22.66■■□□□ 1.22
CBX1-202ENST00000393408 C9orf78Q9NZ63 289 aaPredicted RBP22.66■■□□□ 1.22
CBX1-202ENST00000393408 SMC3Q9UQE7 1217 aa22.66■■□□□ 1.22
CBX1-202ENST00000393408 HEG1Q9ULI3 1381 aa22.65■■□□□ 1.22
CBX1-202ENST00000393408 CPA1P15085 419 aa22.65■■□□□ 1.22
CBX1-202ENST00000393408 AMOTQ4VCS5 1084 aa22.65■■□□□ 1.22
CBX1-202ENST00000393408 LARGE1O95461 756 aa22.65■■□□□ 1.22
CBX1-202ENST00000393408 PROSER3Q2NL68 480 aa22.65■■□□□ 1.22
CBX1-202ENST00000393408 CCDC183Q5T5S1 534 aa22.65■■□□□ 1.22
CBX1-202ENST00000393408 KSR2Q6VAB6 950 aa22.65■■□□□ 1.22
CBX1-202ENST00000393408 ERC1Q8IUD2 1116 aa22.65■■□□□ 1.22
CBX1-202ENST00000393408 GIGYF1O75420 1035 aaPredicted RBP22.64■■□□□ 1.21
CBX1-202ENST00000393408 F13A1P00488 732 aa22.64■■□□□ 1.21
CBX1-202ENST00000393408 GPATCH3Q96I76 525 aa22.64■■□□□ 1.21
CBX1-202ENST00000393408 PSME1Q06323 249 aa22.63■■□□□ 1.21
CBX1-202ENST00000393408 VPS53Q5VIR6 699 aa22.63■■□□□ 1.21
CBX1-202ENST00000393408 FAM184AQ8NB25 1140 aa22.63■■□□□ 1.21
CBX1-202ENST00000393408 TM6SF1Q9BZW5 370 aa22.63■■□□□ 1.21
CBX1-202ENST00000393408 PA2G4Q9UQ80 394 aaKnown RBP22.63■■□□□ 1.21
CBX1-202ENST00000393408 SIPA1L3O60292 1781 aaPredicted RBP22.63■■□□□ 1.21
CBX1-202ENST00000393408 IFIT2P09913 472 aaKnown RBP22.62■■□□□ 1.21
CBX1-202ENST00000393408 UBE2HP62256 183 aa22.62■■□□□ 1.21
CBX1-202ENST00000393408 ADCK5Q3MIX3 580 aa22.62■■□□□ 1.21
CBX1-202ENST00000393408 ZSWIM6Q9HCJ5 1215 aa22.62■■□□□ 1.21
CBX1-202ENST00000393408 HDAC5Q9UQL6 1122 aa22.62■■□□□ 1.21
CBX1-202ENST00000393408 UVSSAQ2YD98 709 aa22.62■■□□□ 1.21
CBX1-202ENST00000393408 PRPF40BQ6NWY9 871 aaKnown RBP22.62■■□□□ 1.21
CBX1-202ENST00000393408 EVI5LQ96CN4 794 aa22.62■■□□□ 1.21
CBX1-202ENST00000393408 JAKMIP1Q96N16 626 aaKnown RBP22.62■■□□□ 1.21
CBX1-202ENST00000393408 PDRG1Q9NUG6 133 aa22.62■■□□□ 1.21
CBX1-202ENST00000393408 CWF19L2Q2TBE0 894 aaKnown RBP22.61■■□□□ 1.21
CBX1-202ENST00000393408 C1orf141Q5JVX7 400 aa22.61■■□□□ 1.21
CBX1-202ENST00000393408 ATP6V1DQ9Y5K8 247 aa22.61■■□□□ 1.21
CBX1-202ENST00000393408 CSPP1Q1MSJ5 1256 aa22.61■■□□□ 1.21
CBX1-202ENST00000393408 R3HCC1Q9Y3T6 440 aaKnown RBP22.61■■□□□ 1.21
CBX1-202ENST00000393408 NECTIN1Q15223 517 aa22.6■■□□□ 1.21
CBX1-202ENST00000393408 ESCO1Q5FWF5 840 aa22.6■■□□□ 1.21
CBX1-202ENST00000393408 CCDC83Q8IWF9 413 aa22.6■■□□□ 1.21
CBX1-202ENST00000393408 ZSCAN31Q96LW9 406 aaPredicted RBP22.6■■□□□ 1.21
CBX1-202ENST00000393408 LETM1O95202 739 aaPredicted RBP22.6■■□□□ 1.21
CBX1-202ENST00000393408 GJB2P29033 226 aa22.6■■□□□ 1.21
CBX1-202ENST00000393408 AACSQ86V21 672 aa22.6■■□□□ 1.21
CBX1-202ENST00000393408 RBM33Q96EV2 1170 aaKnown RBP22.6■■□□□ 1.21
CBX1-202ENST00000393408 SH2B1Q9NRF2 756 aaPredicted RBP22.6■■□□□ 1.21
CBX1-202ENST00000393408 CYP46A1Q9Y6A2 500 aa22.6■■□□□ 1.21
CBX1-202ENST00000393408 CCDC171Q6TFL3 1326 aa22.6■■□□□ 1.21
CBX1-202ENST00000393408 UTYO14607 1347 aa22.59■■□□□ 1.21
CBX1-202ENST00000393408 CAMTA1Q9Y6Y1 1673 aa22.59■■□□□ 1.21
CBX1-202ENST00000393408 PRAMEF22A3QJZ6 481 aa22.59■■□□□ 1.21
CBX1-202ENST00000393408 MTMR6Q9Y217 621 aa22.59■■□□□ 1.21
CBX1-202ENST00000393408 ST3GAL1Q11201 340 aa22.58■■□□□ 1.21
CBX1-202ENST00000393408 ARHGEF25Q86VW2 580 aa22.58■■□□□ 1.21
CBX1-202ENST00000393408 LINS1Q8NG48 757 aa22.58■■□□□ 1.21
CBX1-202ENST00000393408 KAZALD1Q96I82 304 aa22.58■■□□□ 1.21
CBX1-202ENST00000393408 SLIT3O75094 1523 aa22.58■■□□□ 1.21
CBX1-202ENST00000393408 GRM8O00222 908 aa22.58■■□□□ 1.2
CBX1-202ENST00000393408 SASH1O94885 1247 aa22.58■■□□□ 1.2
CBX1-202ENST00000393408 PTMAP06454 111 aaKnown RBP22.58■■□□□ 1.2
CBX1-202ENST00000393408 SUCLG2Q96I99 432 aa22.58■■□□□ 1.2
CBX1-202ENST00000393408 FIBPO43427 364 aa22.57■■□□□ 1.2
CBX1-202ENST00000393408 ADAMTS7Q9UKP4 1686 aa22.57■■□□□ 1.2
CBX1-202ENST00000393408 GCP02774 474 aa22.57■■□□□ 1.2
CBX1-202ENST00000393408 RBM8AQ9Y5S9 174 aaKnown RBP22.57■■□□□ 1.2
CBX1-202ENST00000393408 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.57■■□□□ 1.2
CBX1-202ENST00000393408 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.56■■□□□ 1.2
CBX1-202ENST00000393408 ZKSCAN1P17029 563 aaPredicted RBP22.56■■□□□ 1.2
CBX1-202ENST00000393408 CREB3L3Q68CJ9 461 aa22.56■■□□□ 1.2
CBX1-202ENST00000393408 EAF2Q96CJ1 260 aaPredicted RBP22.56■■□□□ 1.2
CBX1-202ENST00000393408 SNRKQ9NRH2 765 aa22.56■■□□□ 1.2
CBX1-202ENST00000393408 HIP1O00291 1037 aa22.55■■□□□ 1.2
CBX1-202ENST00000393408 ME3Q16798 604 aa22.55■■□□□ 1.2
CBX1-202ENST00000393408 KLHL34Q8N239 644 aa22.55■■□□□ 1.2
CBX1-202ENST00000393408 ANKRD24Q8TF21 1146 aa22.55■■□□□ 1.2
CBX1-202ENST00000393408 MAP4K1Q92918 833 aa22.55■■□□□ 1.2
CBX1-202ENST00000393408 FAM227BQ96M60 508 aa22.55■■□□□ 1.2
CBX1-202ENST00000393408 BICC1Q9H694 974 aaKnown RBP22.55■■□□□ 1.2
CBX1-202ENST00000393408 LMTK3Q96Q04 1460 aa22.55■■□□□ 1.2
CBX1-202ENST00000393408 DNM1Q05193 864 aaKnown RBP22.55■■□□□ 1.2
CBX1-202ENST00000393408 NMIQ13287 307 aaPredicted RBP22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms