RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 STAC3Q96MF2 364 aa18.6■□□□□ 0.57
SHANK1-204ENST00000391814 NSRP1Q9H0G5 558 aaKnown RBP18.6■□□□□ 0.57
SHANK1-204ENST00000391814 MTIF2P46199 727 aaKnown RBP18.6■□□□□ 0.57
SHANK1-204ENST00000391814 GNL3LQ9NVN8 582 aaKnown RBP18.6■□□□□ 0.57
SHANK1-204ENST00000391814 PPFIA3O75145 1194 aa18.59■□□□□ 0.57
SHANK1-204ENST00000391814 NLRP6P59044 892 aa18.59■□□□□ 0.57
SHANK1-204ENST00000391814 U3KPZ7 1027 aaPredicted RBP18.59■□□□□ 0.57
SHANK1-204ENST00000391814 EBAG9O00559 213 aa18.59■□□□□ 0.57
SHANK1-204ENST00000391814 TTC22Q5TAA0 569 aa18.59■□□□□ 0.57
SHANK1-204ENST00000391814 PAIP2Q9BPZ3 127 aaKnown RBP18.59■□□□□ 0.57
SHANK1-204ENST00000391814 THUMPD2Q9BTF0 503 aaKnown RBP18.59■□□□□ 0.57
SHANK1-204ENST00000391814 TAOK3Q9H2K8 898 aa18.59■□□□□ 0.57
SHANK1-204ENST00000391814 SSRP1Q08945 709 aaKnown RBP18.59■□□□□ 0.57
SHANK1-204ENST00000391814 SYT1P21579 422 aa18.59■□□□□ 0.57
SHANK1-204ENST00000391814 TSHZ3Q63HK5 1081 aa18.59■□□□□ 0.57
SHANK1-204ENST00000391814 NSD3Q9BZ95 1437 aa18.59■□□□□ 0.57
SHANK1-204ENST00000391814 GLRX3O76003 335 aaKnown RBP18.59■□□□□ 0.57
SHANK1-204ENST00000391814 FBF1Q8TES7 1133 aa18.59■□□□□ 0.57
SHANK1-204ENST00000391814 BMP2KLQ5H9B9 411 aa18.58■□□□□ 0.57
SHANK1-204ENST00000391814 DUSP27Q5VZP5 1158 aa18.58■□□□□ 0.57
SHANK1-204ENST00000391814 VPS36Q86VN1 386 aa18.58■□□□□ 0.57
SHANK1-204ENST00000391814 RHOXF2BP0C7M4 288 aa18.58■□□□□ 0.57
SHANK1-204ENST00000391814 RHOXF2Q9BQY4 288 aa18.58■□□□□ 0.57
SHANK1-204ENST00000391814 ALDH1L2Q3SY69 923 aa18.58■□□□□ 0.56
SHANK1-204ENST00000391814 FAM200AQ8TCP9 573 aa18.58■□□□□ 0.56
SHANK1-204ENST00000391814 RSRC1Q96IZ7 334 aaKnown RBP18.58■□□□□ 0.56
SHANK1-204ENST00000391814 CAPZA3Q96KX2 299 aa18.58■□□□□ 0.56
SHANK1-204ENST00000391814 RAB3GAP1Q15042 981 aa18.58■□□□□ 0.56
SHANK1-204ENST00000391814 CTAGE9A4FU28 777 aa18.58■□□□□ 0.56
SHANK1-204ENST00000391814 USP5P45974 858 aa18.57■□□□□ 0.56
SHANK1-204ENST00000391814 SELENOSQ9BQE4 189 aa18.57■□□□□ 0.56
SHANK1-204ENST00000391814 NOP2P46087 812 aaKnown RBP18.57■□□□□ 0.56
SHANK1-204ENST00000391814 CCDC114Q96M63 670 aa18.57■□□□□ 0.56
SHANK1-204ENST00000391814 UBA5Q9GZZ9 404 aa18.57■□□□□ 0.56
SHANK1-204ENST00000391814 TRIM27P14373 513 aa18.57■□□□□ 0.56
SHANK1-204ENST00000391814 ZEB2O60315 1214 aa18.57■□□□□ 0.56
SHANK1-204ENST00000391814 NFE2L2Q16236 605 aa18.57■□□□□ 0.56
SHANK1-204ENST00000391814 ANKS4BQ8N8V4 417 aa18.57■□□□□ 0.56
SHANK1-204ENST00000391814 PRAM1Q96QH2 718 aa18.57■□□□□ 0.56
SHANK1-204ENST00000391814 GOLGA8BA8MQT2 603 aa18.57■□□□□ 0.56
SHANK1-204ENST00000391814 KIF4AO95239 1232 aa18.57■□□□□ 0.56
SHANK1-204ENST00000391814 CPSF2Q9P2I0 782 aaKnown RBP18.57■□□□□ 0.56
SHANK1-204ENST00000391814 KARSQ15046 597 aaKnown RBP18.56■□□□□ 0.56
SHANK1-204ENST00000391814 MACROD2A1Z1Q3 448 aa18.56■□□□□ 0.56
SHANK1-204ENST00000391814 CETN2P41208 172 aa18.56■□□□□ 0.56
SHANK1-204ENST00000391814 CCDC96Q2M329 555 aa18.56■□□□□ 0.56
SHANK1-204ENST00000391814 CCDC82Q8N4S0 544 aa18.56■□□□□ 0.56
SHANK1-204ENST00000391814 CDK19Q9BWU1 502 aa18.56■□□□□ 0.56
SHANK1-204ENST00000391814 ERICH3Q5RHP9 1530 aa18.56■□□□□ 0.56
SHANK1-204ENST00000391814 ANAPC15P60006 121 aa18.56■□□□□ 0.56
SHANK1-204ENST00000391814 DAAM2Q86T65 1068 aa18.56■□□□□ 0.56
SHANK1-204ENST00000391814 EHBP1Q8NDI1 1231 aa18.56■□□□□ 0.56
SHANK1-204ENST00000391814 A0A1W2PRG0 241 aa18.56■□□□□ 0.56
SHANK1-204ENST00000391814 CCDC144CPQ8IYA2 1237 aa18.56■□□□□ 0.56
SHANK1-204ENST00000391814 SMARCA4P51532 1647 aa18.56■□□□□ 0.56
SHANK1-204ENST00000391814 RIOK3O14730 519 aaKnown RBP18.56■□□□□ 0.56
SHANK1-204ENST00000391814 FGFR1OPO95684 399 aaKnown RBP18.56■□□□□ 0.56
SHANK1-204ENST00000391814 RRS1Q15050 365 aaKnown RBP18.56■□□□□ 0.56
SHANK1-204ENST00000391814 CCDC129Q6ZRS4 1044 aa18.56■□□□□ 0.56
SHANK1-204ENST00000391814 NECAB1Q8N987 351 aa18.56■□□□□ 0.56
SHANK1-204ENST00000391814 PPM1EQ8WY54 764 aa18.56■□□□□ 0.56
SHANK1-204ENST00000391814 PUS7Q96PZ0 661 aaKnown RBP18.56■□□□□ 0.56
SHANK1-204ENST00000391814 PPP1R12BO60237 982 aaPredicted RBP18.55■□□□□ 0.56
SHANK1-204ENST00000391814 IDH1O75874 414 aaKnown RBP18.55■□□□□ 0.56
SHANK1-204ENST00000391814 AIDAQ96BJ3 306 aa18.55■□□□□ 0.56
SHANK1-204ENST00000391814 ZNF76P36508 570 aa18.55■□□□□ 0.56
SHANK1-204ENST00000391814 HMGB1P09429 215 aaKnown RBP18.55■□□□□ 0.56
SHANK1-204ENST00000391814 RBM42Q9BTD8 480 aaKnown RBP18.55■□□□□ 0.56
SHANK1-204ENST00000391814 MYO1BO43795 1136 aa18.55■□□□□ 0.56
SHANK1-204ENST00000391814 POTEJP0CG39 1038 aa18.55■□□□□ 0.56
SHANK1-204ENST00000391814 KIF20AO95235 890 aa18.55■□□□□ 0.56
SHANK1-204ENST00000391814 CCDC155Q8N6L0 562 aa18.55■□□□□ 0.56
SHANK1-204ENST00000391814 PHAXQ9H814 394 aaKnown RBP18.55■□□□□ 0.56
SHANK1-204ENST00000391814 SARNPP82979 210 aaKnown RBP18.54■□□□□ 0.56
SHANK1-204ENST00000391814 NUCB1Q02818 461 aa18.54■□□□□ 0.56
SHANK1-204ENST00000391814 BTBD11A6QL63 1104 aa18.54■□□□□ 0.56
SHANK1-204ENST00000391814 ABTB2Q8N961 1025 aa18.54■□□□□ 0.56
SHANK1-204ENST00000391814 CCDC8Q9H0W5 538 aaPredicted RBP18.54■□□□□ 0.56
SHANK1-204ENST00000391814 MXRA7P84157 204 aa18.54■□□□□ 0.56
SHANK1-204ENST00000391814 RAB11FIP4Q86YS3 637 aa18.54■□□□□ 0.56
SHANK1-204ENST00000391814 RBSNQ9H1K0 784 aa18.54■□□□□ 0.56
SHANK1-204ENST00000391814 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.54■□□□□ 0.56
SHANK1-204ENST00000391814 HDXQ7Z353 690 aa18.53■□□□□ 0.56
SHANK1-204ENST00000391814 ARHGAP5Q13017 1502 aa18.53■□□□□ 0.56
SHANK1-204ENST00000391814 CAVIN2O95810 425 aa18.53■□□□□ 0.56
SHANK1-204ENST00000391814 TYRO3Q06418 890 aa18.53■□□□□ 0.56
SHANK1-204ENST00000391814 CABP1Q9NZU7 370 aa18.53■□□□□ 0.56
SHANK1-204ENST00000391814 PIP4K2BP78356 416 aa18.53■□□□□ 0.56
SHANK1-204ENST00000391814 DNM1Q05193 864 aaKnown RBP18.53■□□□□ 0.56
SHANK1-204ENST00000391814 FAM76AQ8TAV0 307 aa18.53■□□□□ 0.56
SHANK1-204ENST00000391814 SNX21Q969T3 373 aa18.53■□□□□ 0.56
SHANK1-204ENST00000391814 SLC12A7Q9Y666 1083 aa18.53■□□□□ 0.56
SHANK1-204ENST00000391814 DHX29Q7Z478 1369 aaKnown RBP18.53■□□□□ 0.56
SHANK1-204ENST00000391814 HOOK3Q86VS8 718 aa18.53■□□□□ 0.56
SHANK1-204ENST00000391814 FSD2A1L4K1 749 aa18.52■□□□□ 0.56
SHANK1-204ENST00000391814 F6X3S4 739 aa18.52■□□□□ 0.56
SHANK1-204ENST00000391814 C17orf53Q8N3J3 647 aaPredicted RBP18.52■□□□□ 0.56
SHANK1-204ENST00000391814 GOLGA8AA7E2F4 631 aa18.52■□□□□ 0.56
SHANK1-204ENST00000391814 FCHSD2O94868 740 aa18.52■□□□□ 0.56
SHANK1-204ENST00000391814 MCM10Q7L590 875 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms