RNA–Protein interactions for RNA: ENST00000389993.7

PSME4-201, Transcript of proteasome activator subunit 4, humanhuman

TSL 1 (best)

Gene PSME4, Length 6,581 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME4-201ENST00000389993 ZFYVE27Q5T4F4 411 aa17.16■□□□□ 0.34
PSME4-201ENST00000389993 CCAR1Q8IX12 1150 aaKnown RBP17.15■□□□□ 0.34
PSME4-201ENST00000389993 SIRT1Q96EB6 747 aa17.15■□□□□ 0.34
PSME4-201ENST00000389993 LTKP29376 864 aa17.15■□□□□ 0.34
PSME4-201ENST00000389993 CTNNA3Q9UI47 895 aa17.15■□□□□ 0.34
PSME4-201ENST00000389993 GJB2P29033 226 aa17.15■□□□□ 0.34
PSME4-201ENST00000389993 AKAP4Q5JQC9 854 aa17.15■□□□□ 0.34
PSME4-201ENST00000389993 SOGA3Q5TF21 947 aa17.15■□□□□ 0.34
PSME4-201ENST00000389993 GOLGA8BA8MQT2 603 aa17.14■□□□□ 0.34
PSME4-201ENST00000389993 CCDC39Q9UFE4 941 aa17.14■□□□□ 0.33
PSME4-201ENST00000389993 EIF2AK4Q9P2K8 1649 aaKnown RBP17.14■□□□□ 0.33
PSME4-201ENST00000389993 TMX1Q9H3N1 280 aa17.14■□□□□ 0.33
PSME4-201ENST00000389993 TTC21AQ8NDW8 1320 aa17.14■□□□□ 0.33
PSME4-201ENST00000389993 FILIP1Q7Z7B0 1213 aa17.14■□□□□ 0.33
PSME4-201ENST00000389993 MICU3Q86XE3 530 aa17.14■□□□□ 0.33
PSME4-201ENST00000389993 TANGO6Q9C0B7 1094 aa17.14■□□□□ 0.33
PSME4-201ENST00000389993 U3KPZ7 1027 aaPredicted RBP17.14■□□□□ 0.33
PSME4-201ENST00000389993 SAMD9Q5K651 1589 aa17.14■□□□□ 0.33
PSME4-201ENST00000389993 CPA1P15085 419 aa17.13■□□□□ 0.33
PSME4-201ENST00000389993 KLHL10Q6JEL2 608 aa17.13■□□□□ 0.33
PSME4-201ENST00000389993 IFIT3O14879 490 aaKnown RBP17.13■□□□□ 0.33
PSME4-201ENST00000389993 CRACR2BQ8N4Y2 399 aaPredicted RBP17.13■□□□□ 0.33
PSME4-201ENST00000389993 NPHP3Q7Z494 1330 aa17.13■□□□□ 0.33
PSME4-201ENST00000389993 TARBP1Q13395 1621 aaKnown RBP17.13■□□□□ 0.33
PSME4-201ENST00000389993 PATL2C9JE40 543 aaKnown RBP17.13■□□□□ 0.33
PSME4-201ENST00000389993 GRM8O00222 908 aa17.13■□□□□ 0.33
PSME4-201ENST00000389993 BICC1Q9H694 974 aaKnown RBP17.13■□□□□ 0.33
PSME4-201ENST00000389993 MAP3K12Q12852 859 aa17.12■□□□□ 0.33
PSME4-201ENST00000389993 NBPF6Q5VWK0 638 aa17.12■□□□□ 0.33
PSME4-201ENST00000389993 NBPF5PQ86XG9 351 aaPredicted RBP17.12■□□□□ 0.33
PSME4-201ENST00000389993 NBPF4Q96M43 638 aa17.12■□□□□ 0.33
PSME4-201ENST00000389993 NIP7Q9Y221 180 aaKnown RBP eCLIP17.12■□□□□ 0.33
PSME4-201ENST00000389993 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.12■□□□□ 0.337e-33■■□□□ 14.5
PSME4-201ENST00000389993 SBNO2Q9Y2G9 1366 aa17.12■□□□□ 0.33
PSME4-201ENST00000389993 OFD1O75665 1012 aa17.12■□□□□ 0.33
PSME4-201ENST00000389993 CCDC192P0DO97 292 aa17.12■□□□□ 0.33
PSME4-201ENST00000389993 BIN1O00499 593 aa17.12■□□□□ 0.33
PSME4-201ENST00000389993 NUP62CLQ9H1M0 184 aa17.12■□□□□ 0.33
PSME4-201ENST00000389993 TXLNAP40222 546 aa17.12■□□□□ 0.33
PSME4-201ENST00000389993 PDE1AP54750 535 aa17.12■□□□□ 0.33
PSME4-201ENST00000389993 EVI5LQ96CN4 794 aa17.12■□□□□ 0.33
PSME4-201ENST00000389993 TRIM35Q9UPQ4 493 aa17.12■□□□□ 0.33
PSME4-201ENST00000389993 DDB1Q16531 1140 aa17.11■□□□□ 0.33
PSME4-201ENST00000389993 TFCP2Q12800 502 aa17.11■□□□□ 0.33
PSME4-201ENST00000389993 ZNF594Q96JF6 807 aaPredicted RBP17.11■□□□□ 0.33
PSME4-201ENST00000389993 FLT4P35916 1363 aa17.11■□□□□ 0.33
PSME4-201ENST00000389993 COL17A1Q9UMD9 1497 aaPredicted RBP17.1■□□□□ 0.33
PSME4-201ENST00000389993 RNMTO43148 476 aaKnown RBP17.1■□□□□ 0.33
PSME4-201ENST00000389993 IL13P35225 146 aa17.1■□□□□ 0.33
PSME4-201ENST00000389993 C8orf34Q49A92 452 aa17.1■□□□□ 0.33
PSME4-201ENST00000389993 CEP85Q6P2H3 762 aa17.1■□□□□ 0.33
PSME4-201ENST00000389993 MNS1Q8NEH6 495 aa17.1■□□□□ 0.33
PSME4-201ENST00000389993 KCNQ3O43525 872 aa17.1■□□□□ 0.33
PSME4-201ENST00000389993 C19orf44Q9H6X5 657 aa17.1■□□□□ 0.33
PSME4-201ENST00000389993 IL2RBP14784 551 aa17.1■□□□□ 0.33
PSME4-201ENST00000389993 RXRAP19793 462 aa17.1■□□□□ 0.33
PSME4-201ENST00000389993 ZNF76P36508 570 aa17.1■□□□□ 0.33
PSME4-201ENST00000389993 KRT32Q14532 448 aa17.1■□□□□ 0.33
PSME4-201ENST00000389993 CT47A1Q5JQC4 288 aaPredicted RBP17.1■□□□□ 0.33
PSME4-201ENST00000389993 MIGA1Q8NAN2 632 aa17.1■□□□□ 0.33
PSME4-201ENST00000389993 ZSCAN31Q96LW9 406 aaPredicted RBP17.1■□□□□ 0.33
PSME4-201ENST00000389993 SLC12A7Q9Y666 1083 aa17.1■□□□□ 0.33
PSME4-201ENST00000389993 CCDC96Q2M329 555 aa17.1■□□□□ 0.33
PSME4-201ENST00000389993 MAGEC2Q9UBF1 373 aaPredicted RBP17.1■□□□□ 0.33
PSME4-201ENST00000389993 POLR3AO14802 1390 aaPredicted RBP17.09■□□□□ 0.33
PSME4-201ENST00000389993 SHANK2Q9UPX8 1470 aa17.09■□□□□ 0.33
PSME4-201ENST00000389993 FAM89AQ96GI7 184 aa17.09■□□□□ 0.33
PSME4-201ENST00000389993 MAP3K5Q99683 1374 aa17.09■□□□□ 0.33
PSME4-201ENST00000389993 IL16Q14005 1332 aa17.09■□□□□ 0.33
PSME4-201ENST00000389993 CAGE1Q8TC20 777 aa17.09■□□□□ 0.33
PSME4-201ENST00000389993 DZIP3Q86Y13 1208 aaKnown RBP17.09■□□□□ 0.33
PSME4-201ENST00000389993 C8orf76Q96K31 380 aa17.09■□□□□ 0.33
PSME4-201ENST00000389993 BMP2KLQ5H9B9 411 aa17.08■□□□□ 0.33
PSME4-201ENST00000389993 TBC1D32Q96NH3 1257 aa17.08■□□□□ 0.33
PSME4-201ENST00000389993 GOLGA8AA7E2F4 631 aa17.08■□□□□ 0.33
PSME4-201ENST00000389993 KSR2Q6VAB6 950 aa17.08■□□□□ 0.33
PSME4-201ENST00000389993 A1BGP04217 495 aa17.08■□□□□ 0.32
PSME4-201ENST00000389993 NMIQ13287 307 aaPredicted RBP17.08■□□□□ 0.32
PSME4-201ENST00000389993 CCDC129Q6ZRS4 1044 aa17.08■□□□□ 0.32
PSME4-201ENST00000389993 RIMBP2O15034 1052 aa17.08■□□□□ 0.32
PSME4-201ENST00000389993 LIMCH1Q9UPQ0 1083 aa17.08■□□□□ 0.32
PSME4-201ENST00000389993 PICALMQ13492 652 aa17.07■□□□□ 0.32
PSME4-201ENST00000389993 HSP90AA4PQ58FG1 418 aa17.07■□□□□ 0.32
PSME4-201ENST00000389993 ANKRD44Q8N8A2 993 aa17.07■□□□□ 0.32
PSME4-201ENST00000389993 LETM1O95202 739 aaPredicted RBP17.07■□□□□ 0.32
PSME4-201ENST00000389993 CNKSR2Q8WXI2 1034 aa17.07■□□□□ 0.32
PSME4-201ENST00000389993 TMEM67Q5HYA8 995 aa17.07■□□□□ 0.32
PSME4-201ENST00000389993 ZNF444Q8N0Y2 327 aaPredicted RBP17.07■□□□□ 0.32
PSME4-201ENST00000389993 BRF1Q92994 677 aa17.06■□□□□ 0.32
PSME4-201ENST00000389993 ATP8B2P98198 1209 aa17.06■□□□□ 0.32
PSME4-201ENST00000389993 ZNF771Q7L3S4 317 aaPredicted RBP17.06■□□□□ 0.32
PSME4-201ENST00000389993 USP16Q9Y5T5 823 aa17.06■□□□□ 0.32
PSME4-201ENST00000389993 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.06■□□□□ 0.32
PSME4-201ENST00000389993 HDAC1Q13547 482 aaPredicted RBP17.06■□□□□ 0.32
PSME4-201ENST00000389993 IP6K1Q92551 441 aa17.06■□□□□ 0.32
PSME4-201ENST00000389993 ERCC6L2Q5T890 1561 aa17.06■□□□□ 0.32
PSME4-201ENST00000389993 CDKL5O76039 1030 aa17.05■□□□□ 0.32
PSME4-201ENST00000389993 HCLS1P14317 486 aaPredicted RBP17.05■□□□□ 0.32
PSME4-201ENST00000389993 SLC26A6Q9BXS9 759 aa17.05■□□□□ 0.32
PSME4-201ENST00000389993 MYO5CQ9NQX4 1742 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms