RNA–Protein interactions for RNA: ENST00000384438.1

RNU6-1340P-201, Transcript of RNA, U6 small nuclear 1340, pseudogene, humanhuman

BASIC

Gene RNU6-1340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1340P-201ENST00000384438 FOXR1Q6PIV2 292 aa-0.63□□□□□ -2.51
RNU6-1340P-201ENST00000384438 VSIG10LQ86VR7 867 aa-0.63□□□□□ -2.51
RNU6-1340P-201ENST00000384438 TRIM22Q8IYM9 498 aa-0.63□□□□□ -2.51
RNU6-1340P-201ENST00000384438 SCARB1Q8WTV0 552 aa-0.63□□□□□ -2.51
RNU6-1340P-201ENST00000384438 ZDHHC16Q969W1 377 aa-0.63□□□□□ -2.51
RNU6-1340P-201ENST00000384438 FAT4Q6V0I7 4981 aa-0.63□□□□□ -2.51
RNU6-1340P-201ENST00000384438 ATP5J2-PTCD1G3V325 749 aa-0.64□□□□□ -2.51
RNU6-1340P-201ENST00000384438 TBC1D4O60343 1298 aa-0.64□□□□□ -2.51
RNU6-1340P-201ENST00000384438 PTCD1O75127 700 aaKnown RBP-0.64□□□□□ -2.51
RNU6-1340P-201ENST00000384438 SASH1O94885 1247 aa-0.64□□□□□ -2.51
RNU6-1340P-201ENST00000384438 ZNF20P17024 532 aa-0.64□□□□□ -2.51
RNU6-1340P-201ENST00000384438 MT3P25713 68 aa-0.64□□□□□ -2.51
RNU6-1340P-201ENST00000384438 NOVP48745 357 aa-0.64□□□□□ -2.51
RNU6-1340P-201ENST00000384438 C21orf58P58505 322 aa-0.64□□□□□ -2.51
RNU6-1340P-201ENST00000384438 CPSF6Q16630 551 aaKnown RBP eCLIP-0.64□□□□□ -2.51
RNU6-1340P-201ENST00000384438 DBN1Q16643 649 aa-0.64□□□□□ -2.51
RNU6-1340P-201ENST00000384438 PTCRAQ6ISU1 281 aaPredicted RBP-0.64□□□□□ -2.51
RNU6-1340P-201ENST00000384438 FEZF2Q8TBJ5 459 aa-0.64□□□□□ -2.51
RNU6-1340P-201ENST00000384438 USP33Q8TEY7 942 aa-0.64□□□□□ -2.51
RNU6-1340P-201ENST00000384438 ADAM7Q9H2U9 754 aa-0.64□□□□□ -2.51
RNU6-1340P-201ENST00000384438 GGA1Q9UJY5 639 aa-0.64□□□□□ -2.51
RNU6-1340P-201ENST00000384438 FLG2Q5D862 2391 aaPredicted RBP-0.64□□□□□ -2.51
RNU6-1340P-201ENST00000384438 ZC3H12DA2A288 527 aaKnown RBP-0.65□□□□□ -2.51
RNU6-1340P-201ENST00000384438 SPRY2O43597 315 aa-0.65□□□□□ -2.51
RNU6-1340P-201ENST00000384438 PRICKLE3O43900 615 aaPredicted RBP-0.65□□□□□ -2.51
RNU6-1340P-201ENST00000384438 TMEM253P0C7T8 217 aa-0.65□□□□□ -2.51
RNU6-1340P-201ENST00000384438 GLDCP23378 1020 aa-0.65□□□□□ -2.51
RNU6-1340P-201ENST00000384438 KRTAP12-4P60329 112 aa-0.65□□□□□ -2.51
RNU6-1340P-201ENST00000384438 RTP5Q14D33 572 aa-0.65□□□□□ -2.51
RNU6-1340P-201ENST00000384438 ZNF792Q3KQV3 632 aa-0.65□□□□□ -2.51
RNU6-1340P-201ENST00000384438 KRTAP21-1Q3LI58 79 aa-0.65□□□□□ -2.51
RNU6-1340P-201ENST00000384438 FBXO31Q5XUX0 539 aaPredicted RBP-0.65□□□□□ -2.51
RNU6-1340P-201ENST00000384438 SHISA2Q6UWI4 295 aa-0.65□□□□□ -2.51
RNU6-1340P-201ENST00000384438 RNF135Q8IUD6 432 aa-0.65□□□□□ -2.51
RNU6-1340P-201ENST00000384438 DZIP1LQ8IYY4 767 aaKnown RBP-0.65□□□□□ -2.51
RNU6-1340P-201ENST00000384438 FAM160A2Q8N612 972 aaPredicted RBP-0.65□□□□□ -2.51
RNU6-1340P-201ENST00000384438 AMER2Q8N7J2 671 aa-0.65□□□□□ -2.51
RNU6-1340P-201ENST00000384438 WFDC12Q8WWY7 111 aa-0.65□□□□□ -2.51
RNU6-1340P-201ENST00000384438 RUSC1Q9BVN2 902 aa-0.65□□□□□ -2.51
RNU6-1340P-201ENST00000384438 VPS11Q9H270 941 aa-0.65□□□□□ -2.51
RNU6-1340P-201ENST00000384438 ZNF358Q9NW07 568 aa-0.65□□□□□ -2.51
RNU6-1340P-201ENST00000384438 TP53BP1Q12888 1972 aaPredicted RBP-0.66□□□□□ -2.51
RNU6-1340P-201ENST00000384438 SOCS7O14512 581 aa-0.66□□□□□ -2.52
RNU6-1340P-201ENST00000384438 NOS3P29474 1203 aa-0.66□□□□□ -2.52
RNU6-1340P-201ENST00000384438 PSEN1P49768 467 aa-0.66□□□□□ -2.52
RNU6-1340P-201ENST00000384438 WNT7BP56706 349 aa-0.66□□□□□ -2.52
RNU6-1340P-201ENST00000384438 NNTQ13423 1086 aa-0.66□□□□□ -2.52
RNU6-1340P-201ENST00000384438 GSG1LQ6UXU4 331 aa-0.66□□□□□ -2.52
RNU6-1340P-201ENST00000384438 FRMD5Q7Z6J6 570 aa-0.66□□□□□ -2.52
RNU6-1340P-201ENST00000384438 ZDHHC14Q8IZN3 488 aa-0.66□□□□□ -2.52
RNU6-1340P-201ENST00000384438 MEIOBQ8N635 442 aa-0.66□□□□□ -2.52
RNU6-1340P-201ENST00000384438 ANKS1AQ92625 1134 aa-0.66□□□□□ -2.52
RNU6-1340P-201ENST00000384438 NECTIN2Q92692 538 aa-0.66□□□□□ -2.52
RNU6-1340P-201ENST00000384438 GTPBP3Q969Y2 492 aaKnown RBP-0.66□□□□□ -2.52
RNU6-1340P-201ENST00000384438 ZFAND3Q9H8U3 227 aa-0.66□□□□□ -2.52
RNU6-1340P-201ENST00000384438 ADARB2Q9NS39 739 aaKnown RBP-0.66□□□□□ -2.52
RNU6-1340P-201ENST00000384438 SEMA3GQ9NS98 782 aa-0.66□□□□□ -2.52
RNU6-1340P-201ENST00000384438 SMPD4Q9NXE4 827 aa-0.66□□□□□ -2.52
RNU6-1340P-201ENST00000384438 ZNF580Q9UK33 172 aa-0.66□□□□□ -2.52
RNU6-1340P-201ENST00000384438 USP24Q9UPU5 2620 aa-0.67□□□□□ -2.52
RNU6-1340P-201ENST00000384438 TCAF2A6NFQ2 919 aa-0.67□□□□□ -2.52
RNU6-1340P-201ENST00000384438 C2CD2LO14523 706 aa-0.67□□□□□ -2.52
RNU6-1340P-201ENST00000384438 UPP2O95045 317 aa-0.67□□□□□ -2.52
RNU6-1340P-201ENST00000384438 NFIAQ12857 509 aa-0.67□□□□□ -2.52
RNU6-1340P-201ENST00000384438 ZNF628Q5EBL2 1059 aa-0.67□□□□□ -2.52
RNU6-1340P-201ENST00000384438 RUSC1-AS1Q66K80 236 aa-0.67□□□□□ -2.52
RNU6-1340P-201ENST00000384438 PRR23BQ6ZRT6 265 aa-0.67□□□□□ -2.52
RNU6-1340P-201ENST00000384438 Q6ZTC4 211 aa-0.67□□□□□ -2.52
RNU6-1340P-201ENST00000384438 FBXO15Q8NCQ5 510 aaPredicted RBP-0.67□□□□□ -2.52
RNU6-1340P-201ENST00000384438 SMRP1Q8NCR6 262 aa-0.67□□□□□ -2.52
RNU6-1340P-201ENST00000384438 TAF15Q92804 592 aaKnown RBP eCLIP-0.67□□□□□ -2.52
RNU6-1340P-201ENST00000384438 LIN37Q96GY3 246 aaPredicted RBP-0.67□□□□□ -2.52
RNU6-1340P-201ENST00000384438 JPH4Q96JJ6 628 aa-0.67□□□□□ -2.52
RNU6-1340P-201ENST00000384438 CABP2Q9NPB3 220 aa-0.67□□□□□ -2.52
RNU6-1340P-201ENST00000384438 FBLN5Q9UBX5 448 aa-0.67□□□□□ -2.52
RNU6-1340P-201ENST00000384438 A0A087X1B8 175 aa-0.68□□□□□ -2.52
RNU6-1340P-201ENST00000384438 ETV2O00321 342 aaPredicted RBP-0.68□□□□□ -2.52
RNU6-1340P-201ENST00000384438 TRIM38O00635 465 aa-0.68□□□□□ -2.52
RNU6-1340P-201ENST00000384438 TRAFD1O14545 582 aaPredicted RBP-0.68□□□□□ -2.52
RNU6-1340P-201ENST00000384438 IREB2P48200 963 aaKnown RBP-0.68□□□□□ -2.52
RNU6-1340P-201ENST00000384438 E2F1Q01094 437 aa-0.68□□□□□ -2.52
RNU6-1340P-201ENST00000384438 DHX9Q08211 1270 aaKnown RBP-0.68□□□□□ -2.52
RNU6-1340P-201ENST00000384438 NCBP3Q53F19 620 aaKnown RBP-0.68□□□□□ -2.52
RNU6-1340P-201ENST00000384438 SH2D6Q7Z4S9 175 aa-0.68□□□□□ -2.52
RNU6-1340P-201ENST00000384438 ZNF467Q7Z7K2 595 aaPredicted RBP-0.68□□□□□ -2.52
RNU6-1340P-201ENST00000384438 CSRNP2Q9H175 543 aa-0.68□□□□□ -2.52
RNU6-1340P-201ENST00000384438 ZNF112Q9UJU3 913 aa-0.68□□□□□ -2.52
RNU6-1340P-201ENST00000384438 ADAM29Q9UKF5 820 aa-0.68□□□□□ -2.52
RNU6-1340P-201ENST00000384438 RAXQ9Y2V3 346 aa-0.68□□□□□ -2.52
RNU6-1340P-201ENST00000384438 NEBP20929 6669 aa-0.68□□□□□ -2.52
RNU6-1340P-201ENST00000384438 A0A0A0MRY4 1105 aa-0.69□□□□□ -2.52
RNU6-1340P-201ENST00000384438 ERI2A8K979 691 aaKnown RBP-0.69□□□□□ -2.52
RNU6-1340P-201ENST00000384438 MASP2O00187 686 aa-0.69□□□□□ -2.52
RNU6-1340P-201ENST00000384438 NUBP1P53384 320 aa-0.69□□□□□ -2.52
RNU6-1340P-201ENST00000384438 POU4F2Q12837 409 aa-0.69□□□□□ -2.52
RNU6-1340P-201ENST00000384438 CDSNQ15517 529 aa-0.69□□□□□ -2.52
RNU6-1340P-201ENST00000384438 MST1LQ2TV78 715 aa-0.69□□□□□ -2.52
RNU6-1340P-201ENST00000384438 PLEKHN1Q494U1 663 aaPredicted RBP-0.69□□□□□ -2.52
RNU6-1340P-201ENST00000384438 ZFYVE27Q5T4F4 411 aa-0.69□□□□□ -2.52
RNU6-1340P-201ENST00000384438 ATXN7L2Q5T6C5 722 aaPredicted RBP-0.69□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms