RNA–Protein interactions for RNA: ENST00000381431.9

SGCB-201, Transcript of sarcoglycan beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCB, Length 4,431 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCB-201ENST00000381431 KDM2BQ8NHM5 1336 aa20.04■□□□□ 0.8
SGCB-201ENST00000381431 HMGB1P09429 215 aaKnown RBP20.04■□□□□ 0.8
SGCB-201ENST00000381431 PTPN14Q15678 1187 aa20.04■□□□□ 0.8
SGCB-201ENST00000381431 PDCL2Q8N4E4 241 aa20.04■□□□□ 0.8
SGCB-201ENST00000381431 LRRC59Q96AG4 307 aaKnown RBP20.04■□□□□ 0.8
SGCB-201ENST00000381431 ZNF830Q96NB3 372 aaPredicted RBP20.04■□□□□ 0.8
SGCB-201ENST00000381431 G2E3Q7L622 706 aa20.04■□□□□ 0.8
SGCB-201ENST00000381431 CFAP43Q8NDM7 1665 aa20.04■□□□□ 0.8
SGCB-201ENST00000381431 CCDC144CPQ8IYA2 1237 aa20.03■□□□□ 0.8
SGCB-201ENST00000381431 EYA1Q99502 592 aa20.03■□□□□ 0.8
SGCB-201ENST00000381431 RBM8AQ9Y5S9 174 aaKnown RBP20.03■□□□□ 0.8
SGCB-201ENST00000381431 ARHGEF12Q9NZN5 1544 aa20.03■□□□□ 0.8
SGCB-201ENST00000381431 USP16Q9Y5T5 823 aa20.03■□□□□ 0.8
SGCB-201ENST00000381431 ZSCAN22P10073 491 aaPredicted RBP20.03■□□□□ 0.8
SGCB-201ENST00000381431 STIM1Q13586 685 aa20.03■□□□□ 0.8
SGCB-201ENST00000381431 SOGA3Q5TF21 947 aa20.03■□□□□ 0.8
SGCB-201ENST00000381431 ISM2Q6H9L7 571 aa20.03■□□□□ 0.8
SGCB-201ENST00000381431 PUS7Q96PZ0 661 aaKnown RBP20.03■□□□□ 0.8
SGCB-201ENST00000381431 KLHL34Q8N239 644 aa20.02■□□□□ 0.8
SGCB-201ENST00000381431 DDX19AQ9NUU7 478 aaKnown RBP20.02■□□□□ 0.8
SGCB-201ENST00000381431 UHRF1BP1Q6BDS2 1440 aa20.02■□□□□ 0.8
SGCB-201ENST00000381431 PRIM1P49642 420 aaKnown RBP20.02■□□□□ 0.8
SGCB-201ENST00000381431 TRIM35Q9UPQ4 493 aa20.02■□□□□ 0.8
SGCB-201ENST00000381431 KAT6BQ8WYB5 2073 aa20.02■□□□□ 0.79
SGCB-201ENST00000381431 USP48Q86UV5 1035 aa20.02■□□□□ 0.79
SGCB-201ENST00000381431 ORC3Q9UBD5 711 aaPredicted RBP20.02■□□□□ 0.79
SGCB-201ENST00000381431 KIAA0556O60303 1618 aa20.01■□□□□ 0.79
SGCB-201ENST00000381431 WASF1Q92558 559 aa20.01■□□□□ 0.79
SGCB-201ENST00000381431 UBXN4Q92575 508 aa20.01■□□□□ 0.79
SGCB-201ENST00000381431 IFIT3O14879 490 aaKnown RBP20.01■□□□□ 0.79
SGCB-201ENST00000381431 CWF19L2Q2TBE0 894 aaKnown RBP20.01■□□□□ 0.79
SGCB-201ENST00000381431 LRSAM1Q6UWE0 723 aa20.01■□□□□ 0.79
SGCB-201ENST00000381431 TANGO6Q9C0B7 1094 aa20.01■□□□□ 0.79
SGCB-201ENST00000381431 GRM8O00222 908 aa20.01■□□□□ 0.79
SGCB-201ENST00000381431 MICU3Q86XE3 530 aa20.01■□□□□ 0.79
SGCB-201ENST00000381431 DEF6Q9H4E7 631 aa20.01■□□□□ 0.79
SGCB-201ENST00000381431 ITSN2Q9NZM3 1697 aa20.01■□□□□ 0.79
SGCB-201ENST00000381431 RAB3GAP1Q15042 981 aa20.01■□□□□ 0.79
SGCB-201ENST00000381431 PHAXQ9H814 394 aaKnown RBP20.01■□□□□ 0.79
SGCB-201ENST00000381431 RANBP6O60518 1105 aaKnown RBP20■□□□□ 0.79
SGCB-201ENST00000381431 SNRPA1P09661 255 aaKnown RBP20■□□□□ 0.79
SGCB-201ENST00000381431 MAP3K12Q12852 859 aa20■□□□□ 0.79
SGCB-201ENST00000381431 AXDND1Q5T1B0 1012 aaPredicted RBP20■□□□□ 0.79
SGCB-201ENST00000381431 ZFYVE27Q5T4F4 411 aa20■□□□□ 0.79
SGCB-201ENST00000381431 CTTNBP2Q8WZ74 1663 aa20■□□□□ 0.79
SGCB-201ENST00000381431 DNM1Q05193 864 aaKnown RBP19.99■□□□□ 0.79
SGCB-201ENST00000381431 LMBR1LQ6UX01 489 aa19.99■□□□□ 0.79
SGCB-201ENST00000381431 CWC25Q9NXE8 425 aaPredicted RBP19.99■□□□□ 0.79
SGCB-201ENST00000381431 DHX8Q14562 1220 aaKnown RBP19.99■□□□□ 0.79
SGCB-201ENST00000381431 MAP3K19Q56UN5 1328 aa19.99■□□□□ 0.79
SGCB-201ENST00000381431 TNRQ92752 1358 aa19.99■□□□□ 0.79
SGCB-201ENST00000381431 TNNT1P13805 278 aa19.99■□□□□ 0.79
SGCB-201ENST00000381431 SETQ01105 290 aaPredicted RBP19.99■□□□□ 0.79
SGCB-201ENST00000381431 ERCC4Q92889 916 aaPredicted RBP19.99■□□□□ 0.79
SGCB-201ENST00000381431 SLC12A7Q9Y666 1083 aa19.99■□□□□ 0.79
SGCB-201ENST00000381431 ANAPC15P60006 121 aa19.99■□□□□ 0.79
SGCB-201ENST00000381431 ARHGAP29Q52LW3 1261 aa19.98■□□□□ 0.79
SGCB-201ENST00000381431 TTC21AQ8NDW8 1320 aa19.98■□□□□ 0.79
SGCB-201ENST00000381431 KSR2Q6VAB6 950 aa19.98■□□□□ 0.79
SGCB-201ENST00000381431 USP26Q9BXU7 913 aa19.98■□□□□ 0.79
SGCB-201ENST00000381431 ANKRD18BA2A2Z9 1011 aa19.98■□□□□ 0.79
SGCB-201ENST00000381431 NOM1Q5C9Z4 860 aaKnown RBP19.98■□□□□ 0.79
SGCB-201ENST00000381431 CPA1P15085 419 aa19.97■□□□□ 0.79
SGCB-201ENST00000381431 GOLGA8AA7E2F4 631 aa19.97■□□□□ 0.79
SGCB-201ENST00000381431 URI1O94763 535 aaPredicted RBP19.97■□□□□ 0.79
SGCB-201ENST00000381431 CBX1P83916 185 aa19.97■□□□□ 0.79
SGCB-201ENST00000381431 NPATQ14207 1427 aa19.97■□□□□ 0.79
SGCB-201ENST00000381431 EPB41L2O43491 1005 aaKnown RBP19.96■□□□□ 0.79
SGCB-201ENST00000381431 USP5P45974 858 aa19.96■□□□□ 0.79
SGCB-201ENST00000381431 KIF18AQ8NI77 898 aa19.96■□□□□ 0.79
SGCB-201ENST00000381431 PRDM10Q9NQV6 1147 aa19.96■□□□□ 0.79
SGCB-201ENST00000381431 DTNBO60941 627 aa19.96■□□□□ 0.79
SGCB-201ENST00000381431 ADAMTS2O95450 1211 aa19.96■□□□□ 0.79
SGCB-201ENST00000381431 RIMS2Q9UQ26 1411 aa19.96■□□□□ 0.79
SGCB-201ENST00000381431 CNNM3Q8NE01 707 aa19.96■□□□□ 0.79
SGCB-201ENST00000381431 UHRF1BP1LA0JNW5 1464 aa19.96■□□□□ 0.79
SGCB-201ENST00000381431 CHMLP26374 656 aa19.96■□□□□ 0.79
SGCB-201ENST00000381431 CLCN1P35523 988 aa19.96■□□□□ 0.79
SGCB-201ENST00000381431 EIF5P55010 431 aaKnown RBP19.96■□□□□ 0.79
SGCB-201ENST00000381431 CPLX3Q8WVH0 158 aa19.96■□□□□ 0.79
SGCB-201ENST00000381431 DACT1Q9NYF0 836 aa19.96■□□□□ 0.79
SGCB-201ENST00000381431 DISP1Q96F81 1524 aa19.96■□□□□ 0.79
SGCB-201ENST00000381431 SPATA31E1Q6ZUB1 1445 aa19.95■□□□□ 0.78
SGCB-201ENST00000381431 CCDC196A0A1B0GTZ2 297 aa19.95■□□□□ 0.78
SGCB-201ENST00000381431 CTAGE5O15320 804 aa19.95■□□□□ 0.78
SGCB-201ENST00000381431 TTC12Q9H892 705 aaPredicted RBP19.95■□□□□ 0.78
SGCB-201ENST00000381431 HMG20BQ9P0W2 317 aa19.95■□□□□ 0.78
SGCB-201ENST00000381431 TOP1P11387 765 aaKnown RBP19.95■□□□□ 0.78
SGCB-201ENST00000381431 AK2P54819 239 aa19.95■□□□□ 0.78
SGCB-201ENST00000381431 LINS1Q8NG48 757 aa19.95■□□□□ 0.78
SGCB-201ENST00000381431 SHANK2Q9UPX8 1470 aa19.95■□□□□ 0.78
SGCB-201ENST00000381431 NPC1L1Q9UHC9 1359 aa19.95■□□□□ 0.78
SGCB-201ENST00000381431 IARSP41252 1262 aaKnown RBP19.94■□□□□ 0.78
SGCB-201ENST00000381431 ZSCAN29Q8IWY8 852 aaPredicted RBP19.94■□□□□ 0.78
SGCB-201ENST00000381431 ZNF518AQ6AHZ1 1483 aa19.94■□□□□ 0.78
SGCB-201ENST00000381431 CCDC66A2RUB6 948 aa19.94■□□□□ 0.78
SGCB-201ENST00000381431 PIP4K2BP78356 416 aa19.94■□□□□ 0.78
SGCB-201ENST00000381431 CAVIN4Q5BKX8 364 aa19.94■□□□□ 0.78
SGCB-201ENST00000381431 ALDH1L1O75891 902 aa19.94■□□□□ 0.78
SGCB-201ENST00000381431 RBM5P52756 815 aaKnown RBP eCLIP19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms