RNA–Protein interactions for RNA: ENST00000381033.4

PDX1-201, Transcript of pancreatic and duodenal homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDX1, Length 2,501 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1-201ENST00000381033 DDIT3P35638 169 aa21.03■□□□□ 0.96
PDX1-201ENST00000381033 OS9Q13438 667 aaPredicted RBP21.03■□□□□ 0.96
PDX1-201ENST00000381033 MYD88Q99836 296 aa21.03■□□□□ 0.96
PDX1-201ENST00000381033 ALDH1L1O75891 902 aa21.02■□□□□ 0.96
PDX1-201ENST00000381033 CHMLP26374 656 aa21.02■□□□□ 0.96
PDX1-201ENST00000381033 SNRPA1P09661 255 aaKnown RBP21.02■□□□□ 0.95
PDX1-201ENST00000381033 ZCRB1Q8TBF4 217 aaKnown RBP21.02■□□□□ 0.95
PDX1-201ENST00000381033 PI4K2BQ8TCG2 481 aa21.02■□□□□ 0.95
PDX1-201ENST00000381033 KIF1BPQ96EK5 621 aa21.02■□□□□ 0.95
PDX1-201ENST00000381033 TUBGCP6Q96RT7 1819 aa21.01■□□□□ 0.95
PDX1-201ENST00000381033 HSP90AA1P07900 732 aaKnown RBP21.01■□□□□ 0.95
PDX1-201ENST00000381033 EPHA10Q5JZY3 1008 aa21.01■□□□□ 0.95
PDX1-201ENST00000381033 BBXQ8WY36 941 aaPredicted RBP21.01■□□□□ 0.95
PDX1-201ENST00000381033 ESYT1Q9BSJ8 1104 aa21.01■□□□□ 0.95
PDX1-201ENST00000381033 ATP5J2-PTCD1G3V325 749 aa21.01■□□□□ 0.95
PDX1-201ENST00000381033 PTCD1O75127 700 aaKnown RBP21.01■□□□□ 0.95
PDX1-201ENST00000381033 SIL1Q9H173 461 aa21.01■□□□□ 0.95
PDX1-201ENST00000381033 RAB11FIP3O75154 756 aa21■□□□□ 0.95
PDX1-201ENST00000381033 DDX58O95786 925 aaKnown RBP21■□□□□ 0.95
PDX1-201ENST00000381033 FMNL2Q96PY5 1086 aa21■□□□□ 0.95
PDX1-201ENST00000381033 PALD1Q9ULE6 856 aa21■□□□□ 0.95
PDX1-201ENST00000381033 COL5A2P05997 1499 aaPredicted RBP20.99■□□□□ 0.95
PDX1-201ENST00000381033 NEURL1BA8MQ27 555 aa20.99■□□□□ 0.95
PDX1-201ENST00000381033 REC8O95072 547 aa20.99■□□□□ 0.95
PDX1-201ENST00000381033 ANKRD13DQ6ZTN6 518 aa20.99■□□□□ 0.95
PDX1-201ENST00000381033 MTX1Q13505 466 aa20.99■□□□□ 0.95
PDX1-201ENST00000381033 IPO4Q8TEX9 1081 aaKnown RBP20.99■□□□□ 0.95
PDX1-201ENST00000381033 ANO2Q9NQ90 1003 aa20.99■□□□□ 0.95
PDX1-201ENST00000381033 PKD1L3Q7Z443 1732 aa20.98■□□□□ 0.95
PDX1-201ENST00000381033 RRP9O43818 475 aaKnown RBP20.97■□□□□ 0.95
PDX1-201ENST00000381033 EVA1CP58658 441 aa20.97■□□□□ 0.95
PDX1-201ENST00000381033 RABEP1Q15276 862 aa20.97■□□□□ 0.95
PDX1-201ENST00000381033 NBPF26B4DH59 902 aa20.97■□□□□ 0.95
PDX1-201ENST00000381033 MCM4P33991 863 aa20.97■□□□□ 0.95
PDX1-201ENST00000381033 GCKRQ14397 625 aa20.97■□□□□ 0.95
PDX1-201ENST00000381033 HSP90AA2PQ14568 343 aaPredicted RBP20.97■□□□□ 0.95
PDX1-201ENST00000381033 NBPF14Q5TI25 921 aa20.97■□□□□ 0.95
PDX1-201ENST00000381033 NBPF10Q6P3W6 841 aaKnown RBP20.97■□□□□ 0.95
PDX1-201ENST00000381033 NBPF15Q8N660 670 aa20.97■□□□□ 0.95
PDX1-201ENST00000381033 CNKSR2Q8WXI2 1034 aa20.97■□□□□ 0.95
PDX1-201ENST00000381033 AK9Q5TCS8 1911 aa20.96■□□□□ 0.95
PDX1-201ENST00000381033 METTL22Q9BUU2 404 aaPredicted RBP20.96■□□□□ 0.95
PDX1-201ENST00000381033 SASH1O94885 1247 aa20.96■□□□□ 0.95
PDX1-201ENST00000381033 A1BGP04217 495 aa20.96■□□□□ 0.95
PDX1-201ENST00000381033 IL2RBP14784 551 aa20.96■□□□□ 0.95
PDX1-201ENST00000381033 TNPO1Q92973 898 aaKnown RBP20.95■□□□□ 0.94
PDX1-201ENST00000381033 MRC1P22897 1456 aa20.95■□□□□ 0.94
PDX1-201ENST00000381033 NEXNQ0ZGT2 675 aa20.95■□□□□ 0.94
PDX1-201ENST00000381033 UTYO14607 1347 aa20.94■□□□□ 0.94
PDX1-201ENST00000381033 PCDH11XQ9BZA7 1347 aa20.94■□□□□ 0.94
PDX1-201ENST00000381033 PCDH11YQ9BZA8 1340 aa20.94■□□□□ 0.94
PDX1-201ENST00000381033 TLR7Q9NYK1 1049 aaKnown RBP20.94■□□□□ 0.94
PDX1-201ENST00000381033 TTLL7Q6ZT98 887 aa20.94■□□□□ 0.94
PDX1-201ENST00000381033 UBE3BQ7Z3V4 1068 aa20.94■□□□□ 0.94
PDX1-201ENST00000381033 CCDC8Q9H0W5 538 aaPredicted RBP20.94■□□□□ 0.94
PDX1-201ENST00000381033 GZF1Q9H116 711 aaPredicted RBP20.93■□□□□ 0.94
PDX1-201ENST00000381033 CLASRPQ8N2M8 674 aaKnown RBP20.93■□□□□ 0.94
PDX1-201ENST00000381033 EAF2Q96CJ1 260 aaPredicted RBP20.93■□□□□ 0.94
PDX1-201ENST00000381033 CARD10Q9BWT7 1032 aa20.93■□□□□ 0.94
PDX1-201ENST00000381033 PKP1Q13835 747 aa20.92■□□□□ 0.94
PDX1-201ENST00000381033 NOL8Q76FK4 1167 aaKnown RBP20.92■□□□□ 0.94
PDX1-201ENST00000381033 AACSQ86V21 672 aa20.92■□□□□ 0.94
PDX1-201ENST00000381033 ZGPATQ8N5A5 531 aaKnown RBP20.92■□□□□ 0.94
PDX1-201ENST00000381033 BTG4Q9NY30 223 aa20.92■□□□□ 0.94
PDX1-201ENST00000381033 GLI3P10071 1580 aa20.92■□□□□ 0.94
PDX1-201ENST00000381033 NEK4P51957 841 aa20.92■□□□□ 0.94
PDX1-201ENST00000381033 CWC27Q6UX04 472 aaKnown RBP20.91■□□□□ 0.94
PDX1-201ENST00000381033 TAOK2Q9UL54 1235 aa20.91■□□□□ 0.94
PDX1-201ENST00000381033 KAT6BQ8WYB5 2073 aa20.91■□□□□ 0.94
PDX1-201ENST00000381033 ABCC6O95255 1503 aa20.91■□□□□ 0.94
PDX1-201ENST00000381033 SSFA2P28290 1259 aa20.91■□□□□ 0.94
PDX1-201ENST00000381033 GTF2E1P29083 439 aaPredicted RBP20.91■□□□□ 0.94
PDX1-201ENST00000381033 HSP90AB4PQ58FF6 505 aa20.91■□□□□ 0.94
PDX1-201ENST00000381033 UPF3BQ9BZI7 483 aaKnown RBP20.9■□□□□ 0.94
PDX1-201ENST00000381033 AOX1Q06278 1338 aa20.9■□□□□ 0.94
PDX1-201ENST00000381033 ABCA3Q99758 1704 aa20.89■□□□□ 0.94
PDX1-201ENST00000381033 A0A087WZG4 1122 aa20.89■□□□□ 0.93
PDX1-201ENST00000381033 IFIT2P09913 472 aaKnown RBP20.89■□□□□ 0.93
PDX1-201ENST00000381033 G3BP1Q13283 466 aaKnown RBP eCLIP20.88■□□□□ 0.93
PDX1-201ENST00000381033 RAB3GAP1Q15042 981 aa20.88■□□□□ 0.93
PDX1-201ENST00000381033 ZBTB3Q9H5J0 574 aa20.88■□□□□ 0.93
PDX1-201ENST00000381033 ZNF330Q9Y3S2 320 aaPredicted RBP20.88■□□□□ 0.93
PDX1-201ENST00000381033 ZFP91Q96JP5 570 aaPredicted RBP20.87■□□□□ 0.93
PDX1-201ENST00000381033 BRPF3Q9ULD4 1205 aa20.87■□□□□ 0.93
PDX1-201ENST00000381033 ECHDC1Q9NTX5 307 aa20.87■□□□□ 0.93
PDX1-201ENST00000381033 ERVV-2B6SEH9 535 aa20.86■□□□□ 0.93
PDX1-201ENST00000381033 ST18O60284 1047 aa20.86■□□□□ 0.93
PDX1-201ENST00000381033 CNTROBQ8N137 903 aa20.86■□□□□ 0.93
PDX1-201ENST00000381033 ASAP1Q9ULH1 1129 aa20.86■□□□□ 0.93
PDX1-201ENST00000381033 PARP4Q9UKK3 1724 aaKnown RBP20.86■□□□□ 0.93
PDX1-201ENST00000381033 NKX1-1Q15270 411 aaPredicted RBP20.86■□□□□ 0.93
PDX1-201ENST00000381033 BCCIPQ9P287 314 aaKnown RBP eCLIP20.86■□□□□ 0.93
PDX1-201ENST00000381033 PRDM4Q9UKN5 801 aa20.86■□□□□ 0.93
PDX1-201ENST00000381033 NDUFB9Q9Y6M9 179 aa20.86■□□□□ 0.93
PDX1-201ENST00000381033 SGSM2O43147 1006 aa20.85■□□□□ 0.93
PDX1-201ENST00000381033 GLRX3O76003 335 aaKnown RBP20.85■□□□□ 0.93
PDX1-201ENST00000381033 PLBD2Q8NHP8 589 aa20.85■□□□□ 0.93
PDX1-201ENST00000381033 SHANK3Q9BYB0 1731 aa20.85■□□□□ 0.93
PDX1-201ENST00000381033 EDC3Q96F86 508 aaKnown RBP20.85■□□□□ 0.93
PDX1-201ENST00000381033 CHAMP1Q96JM3 812 aa20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms