RNA–Protein interactions for RNA: ENST00000379521.8

NFX1-202, Transcript of nuclear transcription factor, X-box binding 1, humanhuman

TSL 1 (best)

Gene NFX1, Length 3,609 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFX1-202ENST00000379521 HMMRO75330 724 aa8.45□□□□□ -1.06
NFX1-202ENST00000379521 NBPF7P0C2Y1 421 aaPredicted RBP8.45□□□□□ -1.06
NFX1-202ENST00000379521 PROSER3Q2NL68 480 aa8.45□□□□□ -1.06
NFX1-202ENST00000379521 ZNF790Q6PG37 636 aa8.45□□□□□ -1.06
NFX1-202ENST00000379521 DNAAF4Q8WXU2 420 aa8.45□□□□□ -1.06
NFX1-202ENST00000379521 CHPF2Q9P2E5 772 aa8.45□□□□□ -1.06
NFX1-202ENST00000379521 LINS1Q8NG48 757 aa8.45□□□□□ -1.06
NFX1-202ENST00000379521 LRRCC1Q9C099 1032 aa8.45□□□□□ -1.06
NFX1-202ENST00000379521 PALLDQ8WX93 1383 aa8.45□□□□□ -1.06
NFX1-202ENST00000379521 SLC4A3P48751 1232 aa8.44□□□□□ -1.06
NFX1-202ENST00000379521 PLA2G12BQ9BX93 195 aa8.44□□□□□ -1.06
NFX1-202ENST00000379521 COPRSQ9NQ92 184 aa8.44□□□□□ -1.06
NFX1-202ENST00000379521 ABCC12Q96J65 1359 aa8.44□□□□□ -1.06
NFX1-202ENST00000379521 ZNF609O15014 1411 aa8.44□□□□□ -1.06
NFX1-202ENST00000379521 TRIM28Q13263 835 aaKnown RBP8.44□□□□□ -1.06
NFX1-202ENST00000379521 CARD10Q9BWT7 1032 aa8.44□□□□□ -1.06
NFX1-202ENST00000379521 ATG3Q9NT62 314 aa8.44□□□□□ -1.06
NFX1-202ENST00000379521 RAD50Q92878 1312 aa8.44□□□□□ -1.06
NFX1-202ENST00000379521 MX1P20591 662 aa8.44□□□□□ -1.06
NFX1-202ENST00000379521 UNC5CLQ8IV45 518 aa8.44□□□□□ -1.06
NFX1-202ENST00000379521 TM6SF1Q9BZW5 370 aa8.44□□□□□ -1.06
NFX1-202ENST00000379521 LRRFIP2Q9Y608 721 aaKnown RBP8.44□□□□□ -1.06
NFX1-202ENST00000379521 RGL2O15211 777 aa8.43□□□□□ -1.06
NFX1-202ENST00000379521 SGSM2O43147 1006 aa8.43□□□□□ -1.06
NFX1-202ENST00000379521 CWC22Q9HCG8 908 aaKnown RBP8.43□□□□□ -1.06
NFX1-202ENST00000379521 H7C1W4 665 aa8.43□□□□□ -1.06
NFX1-202ENST00000379521 ELL2O00472 640 aaPredicted RBP8.43□□□□□ -1.06
NFX1-202ENST00000379521 SASH1O94885 1247 aa8.43□□□□□ -1.06
NFX1-202ENST00000379521 VSIG10Q8N0Z9 540 aa8.43□□□□□ -1.06
NFX1-202ENST00000379521 CDK5RAP2Q96SN8 1893 aa8.43□□□□□ -1.06
NFX1-202ENST00000379521 GPR108Q9NPR9 543 aa8.43□□□□□ -1.06
NFX1-202ENST00000379521 QSER1Q2KHR3 1735 aa8.43□□□□□ -1.06
NFX1-202ENST00000379521 BTBD11A6QL63 1104 aa8.43□□□□□ -1.06
NFX1-202ENST00000379521 ERC2O15083 957 aa8.43□□□□□ -1.06
NFX1-202ENST00000379521 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.43□□□□□ -1.06
NFX1-202ENST00000379521 METTL22Q9BUU2 404 aaPredicted RBP8.43□□□□□ -1.06
NFX1-202ENST00000379521 LAS1LQ9Y4W2 734 aaKnown RBP8.43□□□□□ -1.06
NFX1-202ENST00000379521 NEURL1BA8MQ27 555 aa8.42□□□□□ -1.06
NFX1-202ENST00000379521 FOXO4P98177 505 aa8.42□□□□□ -1.06
NFX1-202ENST00000379521 HDGFL1Q5TGJ6 251 aa8.42□□□□□ -1.06
NFX1-202ENST00000379521 RHPN1Q8TCX5 695 aa8.42□□□□□ -1.06
NFX1-202ENST00000379521 PPP1R42Q7Z4L9 355 aa8.42□□□□□ -1.06
NFX1-202ENST00000379521 USHBP1Q8N6Y0 703 aa8.42□□□□□ -1.06
NFX1-202ENST00000379521 CACNA1SQ13698 1873 aa8.42□□□□□ -1.06
NFX1-202ENST00000379521 NECTIN1Q15223 517 aa8.42□□□□□ -1.06
NFX1-202ENST00000379521 TNPO1Q92973 898 aaKnown RBP8.42□□□□□ -1.06
NFX1-202ENST00000379521 ZNF530Q6P9A1 599 aaPredicted RBP8.41□□□□□ -1.06
NFX1-202ENST00000379521 KIF1BPQ96EK5 621 aa8.41□□□□□ -1.06
NFX1-202ENST00000379521 STK31Q9BXU1 1019 aa8.41□□□□□ -1.06
NFX1-202ENST00000379521 UPF2Q9HAU5 1272 aaKnown RBP8.41□□□□□ -1.06
NFX1-202ENST00000379521 RIC1Q4ADV7 1423 aa8.41□□□□□ -1.06
NFX1-202ENST00000379521 BTAF1O14981 1849 aa8.41□□□□□ -1.06
NFX1-202ENST00000379521 NUTM2FA1L443 756 aa8.41□□□□□ -1.06
NFX1-202ENST00000379521 PRAMEF22A3QJZ6 481 aa8.41□□□□□ -1.06
NFX1-202ENST00000379521 SMARCA5O60264 1052 aaPredicted RBP8.41□□□□□ -1.06
NFX1-202ENST00000379521 BRD1O95696 1058 aa8.41□□□□□ -1.06
NFX1-202ENST00000379521 ZNF445P59923 1031 aa8.41□□□□□ -1.06
NFX1-202ENST00000379521 AGXT2Q9BYV1 514 aa8.41□□□□□ -1.06
NFX1-202ENST00000379521 SENP3Q9H4L4 574 aaPredicted RBP8.41□□□□□ -1.06
NFX1-202ENST00000379521 TNRC6CQ9HCJ0 1690 aaKnown RBP8.41□□□□□ -1.06
NFX1-202ENST00000379521 NBPF26B4DH59 902 aa8.41□□□□□ -1.06
NFX1-202ENST00000379521 PTMSP20962 102 aa8.41□□□□□ -1.06
NFX1-202ENST00000379521 MCM2P49736 904 aa8.41□□□□□ -1.06
NFX1-202ENST00000379521 ST3GAL1Q11201 340 aa8.41□□□□□ -1.06
NFX1-202ENST00000379521 GCKRQ14397 625 aa8.41□□□□□ -1.06
NFX1-202ENST00000379521 NBPF14Q5TI25 921 aa8.41□□□□□ -1.06
NFX1-202ENST00000379521 NBPF10Q6P3W6 841 aaKnown RBP8.41□□□□□ -1.06
NFX1-202ENST00000379521 NBPF15Q8N660 670 aa8.41□□□□□ -1.06
NFX1-202ENST00000379521 PCDH11XQ9BZA7 1347 aa8.4□□□□□ -1.06
NFX1-202ENST00000379521 PCDH11YQ9BZA8 1340 aa8.4□□□□□ -1.06
NFX1-202ENST00000379521 PI4KAP2A4QPH2 592 aa8.4□□□□□ -1.06
NFX1-202ENST00000379521 IFNL2Q8IZJ0 200 aa8.4□□□□□ -1.06
NFX1-202ENST00000379521 PI4KAP1Q8N8J0 262 aa8.4□□□□□ -1.06
NFX1-202ENST00000379521 RTL9Q8NET4 1388 aa8.4□□□□□ -1.06
NFX1-202ENST00000379521 RTL5Q5HYW3 569 aaPredicted RBP8.4□□□□□ -1.06
NFX1-202ENST00000379521 PROSER2Q86WR7 435 aaPredicted RBP8.4□□□□□ -1.06
NFX1-202ENST00000379521 RBM42Q9BTD8 480 aaKnown RBP8.4□□□□□ -1.06
NFX1-202ENST00000379521 ISCA1Q9BUE6 129 aa8.4□□□□□ -1.06
NFX1-202ENST00000379521 FBXO3Q9UK99 471 aa8.4□□□□□ -1.06
NFX1-202ENST00000379521 HSP90AB1P08238 724 aaKnown RBP8.4□□□□□ -1.07
NFX1-202ENST00000379521 ZNF512BQ96KM6 892 aaPredicted RBP8.4□□□□□ -1.07
NFX1-202ENST00000379521 NID2Q14112 1375 aa8.39□□□□□ -1.07
NFX1-202ENST00000379521 UBR3Q6ZT12 1888 aa8.39□□□□□ -1.07
NFX1-202ENST00000379521 GRM8O00222 908 aa8.39□□□□□ -1.07
NFX1-202ENST00000379521 REC8O95072 547 aa8.39□□□□□ -1.07
NFX1-202ENST00000379521 MFAP1P55081 439 aaKnown RBP8.39□□□□□ -1.07
NFX1-202ENST00000379521 HSP90AB4PQ58FF6 505 aa8.39□□□□□ -1.07
NFX1-202ENST00000379521 NPM2Q86SE8 214 aaKnown RBP8.39□□□□□ -1.07
NFX1-202ENST00000379521 SUCLG2Q96I99 432 aa8.39□□□□□ -1.07
NFX1-202ENST00000379521 LMBRD1Q9NUN5 540 aa8.39□□□□□ -1.07
NFX1-202ENST00000379521 PALD1Q9ULE6 856 aa8.39□□□□□ -1.07
NFX1-202ENST00000379521 SPG7Q9UQ90 795 aa8.39□□□□□ -1.07
NFX1-202ENST00000379521 CIAO1O76071 339 aa8.39□□□□□ -1.07
NFX1-202ENST00000379521 EVCP57679 992 aa8.39□□□□□ -1.07
NFX1-202ENST00000379521 MAP4K1Q92918 833 aa8.39□□□□□ -1.07
NFX1-202ENST00000379521 ZSWIM6Q9HCJ5 1215 aa8.39□□□□□ -1.07
NFX1-202ENST00000379521 CSF1RP07333 972 aa8.39□□□□□ -1.07
NFX1-202ENST00000379521 PTPN12Q05209 780 aaKnown RBP8.39□□□□□ -1.07
NFX1-202ENST00000379521 MPRIPQ6WCQ1 1025 aa8.39□□□□□ -1.07
NFX1-202ENST00000379521 MYH13Q9UKX3 1938 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 172.7 ms