RNA–Protein interactions for RNA: ENST00000379073.9

PMFBP1-203, Transcript of polyamine modulated factor 1 binding protein 1, humanhuman

TSL 2

Gene PMFBP1, Length 3,671 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMFBP1-203ENST00000379073 GNPATO15228 680 aa8.6□□□□□ -1.03
PMFBP1-203ENST00000379073 G3BP1Q13283 466 aaKnown RBP eCLIP8.6□□□□□ -1.03
PMFBP1-203ENST00000379073 PDIA6Q15084 440 aa8.6□□□□□ -1.03
PMFBP1-203ENST00000379073 BARGINQ6ZT62 677 aa8.6□□□□□ -1.03
PMFBP1-203ENST00000379073 SMARCC1Q92922 1105 aaPredicted RBP8.6□□□□□ -1.03
PMFBP1-203ENST00000379073 TRMT112Q9UI30 125 aaKnown RBP8.6□□□□□ -1.03
PMFBP1-203ENST00000379073 RGPD1P0DJD0 1748 aa8.6□□□□□ -1.03
PMFBP1-203ENST00000379073 CRKLP46109 303 aaKnown RBP8.59□□□□□ -1.03
PMFBP1-203ENST00000379073 SIRT2Q8IXJ6 389 aa8.59□□□□□ -1.03
PMFBP1-203ENST00000379073 ANKRD44Q8N8A2 993 aa8.59□□□□□ -1.03
PMFBP1-203ENST00000379073 METTL22Q9BUU2 404 aaPredicted RBP8.59□□□□□ -1.03
PMFBP1-203ENST00000379073 NUTM1Q86Y26 1132 aa8.59□□□□□ -1.03
PMFBP1-203ENST00000379073 RILPL2Q969X0 211 aa8.59□□□□□ -1.03
PMFBP1-203ENST00000379073 MAP4K4O95819 1239 aaPredicted RBP8.59□□□□□ -1.03
PMFBP1-203ENST00000379073 RXRBP28702 533 aa8.59□□□□□ -1.03
PMFBP1-203ENST00000379073 PLBD2Q8NHP8 589 aa8.59□□□□□ -1.03
PMFBP1-203ENST00000379073 SUCLG2Q96I99 432 aa8.59□□□□□ -1.03
PMFBP1-203ENST00000379073 CCDC87Q9NVE4 849 aa8.59□□□□□ -1.03
PMFBP1-203ENST00000379073 CWC25Q9NXE8 425 aaPredicted RBP8.59□□□□□ -1.03
PMFBP1-203ENST00000379073 HDAC5Q9UQL6 1122 aa8.59□□□□□ -1.03
PMFBP1-203ENST00000379073 SOS1Q07889 1333 aaPredicted RBP8.59□□□□□ -1.03
PMFBP1-203ENST00000379073 KDM2BQ8NHM5 1336 aa8.59□□□□□ -1.03
PMFBP1-203ENST00000379073 PALLDQ8WX93 1383 aa8.59□□□□□ -1.03
PMFBP1-203ENST00000379073 NHSL1Q5SYE7 1610 aa8.59□□□□□ -1.04
PMFBP1-203ENST00000379073 AHDC1Q5TGY3 1603 aaPredicted RBP8.59□□□□□ -1.04
PMFBP1-203ENST00000379073 MFAP1P55081 439 aaKnown RBP8.58□□□□□ -1.04
PMFBP1-203ENST00000379073 SLC4A9Q96Q91 983 aa8.58□□□□□ -1.04
PMFBP1-203ENST00000379073 BICC1Q9H694 974 aaKnown RBP8.58□□□□□ -1.04
PMFBP1-203ENST00000379073 NEURL1BA8MQ27 555 aa8.58□□□□□ -1.04
PMFBP1-203ENST00000379073 HLFQ16534 295 aa8.58□□□□□ -1.04
PMFBP1-203ENST00000379073 LMBR1LQ6UX01 489 aa8.58□□□□□ -1.04
PMFBP1-203ENST00000379073 OTUD7AQ8TE49 926 aaPredicted RBP8.58□□□□□ -1.04
PMFBP1-203ENST00000379073 GCC1Q96CN9 775 aa8.58□□□□□ -1.04
PMFBP1-203ENST00000379073 AK7Q96M32 723 aa8.58□□□□□ -1.04
PMFBP1-203ENST00000379073 NEUROD6Q96NK8 337 aa8.58□□□□□ -1.04
PMFBP1-203ENST00000379073 UPF2Q9HAU5 1272 aaKnown RBP8.58□□□□□ -1.04
PMFBP1-203ENST00000379073 IGKV5-2P06315 115 aa8.58□□□□□ -1.04
PMFBP1-203ENST00000379073 HDAC1Q13547 482 aaPredicted RBP8.58□□□□□ -1.04
PMFBP1-203ENST00000379073 ITPK1Q13572 414 aa8.58□□□□□ -1.04
PMFBP1-203ENST00000379073 GCKRQ14397 625 aa8.58□□□□□ -1.04
PMFBP1-203ENST00000379073 FAM161AQ3B820 660 aa8.58□□□□□ -1.04
PMFBP1-203ENST00000379073 ZNF772Q68DY9 489 aaPredicted RBP8.58□□□□□ -1.04
PMFBP1-203ENST00000379073 SYNE4Q8N205 404 aa8.58□□□□□ -1.04
PMFBP1-203ENST00000379073 IL27Q8NEV9 243 aa8.58□□□□□ -1.04
PMFBP1-203ENST00000379073 DDRGK1Q96HY6 314 aa8.58□□□□□ -1.04
PMFBP1-203ENST00000379073 ZPR1O75312 459 aa8.57□□□□□ -1.04
PMFBP1-203ENST00000379073 APBA3O96018 575 aa8.57□□□□□ -1.04
PMFBP1-203ENST00000379073 ADCY9O60503 1353 aa8.57□□□□□ -1.04
PMFBP1-203ENST00000379073 ALDH1L1O75891 902 aa8.57□□□□□ -1.04
PMFBP1-203ENST00000379073 CYP19A1P11511 503 aaPredicted RBP8.57□□□□□ -1.04
PMFBP1-203ENST00000379073 ATP8B2P98198 1209 aa8.57□□□□□ -1.04
PMFBP1-203ENST00000379073 LRRCC1Q9C099 1032 aa8.57□□□□□ -1.04
PMFBP1-203ENST00000379073 NIP7Q9Y221 180 aaKnown RBP eCLIP8.57□□□□□ -1.04
PMFBP1-203ENST00000379073 COL16A1Q07092 1604 aaPredicted RBP8.57□□□□□ -1.04
PMFBP1-203ENST00000379073 BCL11BQ9C0K0 894 aaPredicted RBP8.57□□□□□ -1.04
PMFBP1-203ENST00000379073 BCL9LQ86UU0 1499 aa8.57□□□□□ -1.04
PMFBP1-203ENST00000379073 IFIT2P09913 472 aaKnown RBP8.56□□□□□ -1.04
PMFBP1-203ENST00000379073 HCLS1P14317 486 aaPredicted RBP8.56□□□□□ -1.04
PMFBP1-203ENST00000379073 C8orf34Q49A92 452 aa8.56□□□□□ -1.04
PMFBP1-203ENST00000379073 GORABQ5T7V8 394 aa8.56□□□□□ -1.04
PMFBP1-203ENST00000379073 RBM6P78332 1123 aaKnown RBP8.56□□□□□ -1.04
PMFBP1-203ENST00000379073 ZNF594Q96JF6 807 aaPredicted RBP8.56□□□□□ -1.04
PMFBP1-203ENST00000379073 CCDC8Q9H0W5 538 aaPredicted RBP8.56□□□□□ -1.04
PMFBP1-203ENST00000379073 LRP6O75581 1613 aa8.56□□□□□ -1.04
PMFBP1-203ENST00000379073 RFC4P35249 363 aa8.56□□□□□ -1.04
PMFBP1-203ENST00000379073 SRP68Q9UHB9 627 aaKnown RBP8.56□□□□□ -1.04
PMFBP1-203ENST00000379073 RTCBQ9Y3I0 505 aaKnown RBP8.56□□□□□ -1.04
PMFBP1-203ENST00000379073 COL18A1P39060 1754 aa8.56□□□□□ -1.04
PMFBP1-203ENST00000379073 CCDC57Q2TAC2 916 aa8.55□□□□□ -1.04
PMFBP1-203ENST00000379073 SMC5Q8IY18 1101 aa8.55□□□□□ -1.04
PMFBP1-203ENST00000379073 TNS2Q63HR2 1409 aa8.55□□□□□ -1.04
PMFBP1-203ENST00000379073 NUCB1Q02818 461 aa8.55□□□□□ -1.04
PMFBP1-203ENST00000379073 EPHA10Q5JZY3 1008 aa8.55□□□□□ -1.04
PMFBP1-203ENST00000379073 FAM196AQ6ZSG2 479 aa8.55□□□□□ -1.04
PMFBP1-203ENST00000379073 DCTPP1Q9H773 170 aa8.55□□□□□ -1.04
PMFBP1-203ENST00000379073 TCIRG1Q13488 830 aa8.55□□□□□ -1.04
PMFBP1-203ENST00000379073 NFKBIBQ15653 356 aa8.55□□□□□ -1.04
PMFBP1-203ENST00000379073 AACSQ86V21 672 aa8.55□□□□□ -1.04
PMFBP1-203ENST00000379073 CLASRPQ8N2M8 674 aaKnown RBP8.55□□□□□ -1.04
PMFBP1-203ENST00000379073 COL14A1Q05707 1796 aaKnown RBP8.54□□□□□ -1.04
PMFBP1-203ENST00000379073 SLIT2O94813 1529 aa8.54□□□□□ -1.04
PMFBP1-203ENST00000379073 DCAF8L1A6NGE4 600 aa8.54□□□□□ -1.04
PMFBP1-203ENST00000379073 SF3B2Q13435 895 aaKnown RBP8.54□□□□□ -1.04
PMFBP1-203ENST00000379073 TFCP2L1Q9NZI6 479 aa8.54□□□□□ -1.04
PMFBP1-203ENST00000379073 VSIG10Q8N0Z9 540 aa8.54□□□□□ -1.04
PMFBP1-203ENST00000379073 LINC00116Q8NCU8 138 aa8.54□□□□□ -1.04
PMFBP1-203ENST00000379073 CNNM1Q9NRU3 951 aa8.54□□□□□ -1.04
PMFBP1-203ENST00000379073 BCL9O00512 1426 aa8.54□□□□□ -1.04
PMFBP1-203ENST00000379073 USPL1Q5W0Q7 1092 aa8.53□□□□□ -1.04
PMFBP1-203ENST00000379073 MAP3K15Q6ZN16 1313 aa8.53□□□□□ -1.04
PMFBP1-203ENST00000379073 IRS4O14654 1257 aaPredicted RBP8.53□□□□□ -1.04
PMFBP1-203ENST00000379073 RHPN1Q8TCX5 695 aa8.53□□□□□ -1.04
PMFBP1-203ENST00000379073 ZNF652Q9Y2D9 606 aa8.53□□□□□ -1.04
PMFBP1-203ENST00000379073 LMO7Q8WWI1 1683 aa8.53□□□□□ -1.04
PMFBP1-203ENST00000379073 SEC24BO95487 1268 aa8.53□□□□□ -1.04
PMFBP1-203ENST00000379073 HSP90AB4PQ58FF6 505 aa8.53□□□□□ -1.04
PMFBP1-203ENST00000379073 HSP90AB3PQ58FF7 597 aa8.53□□□□□ -1.04
PMFBP1-203ENST00000379073 USP54Q70EL1 1684 aa8.52□□□□□ -1.04
PMFBP1-203ENST00000379073 IL6STP40189 918 aaPredicted RBP8.52□□□□□ -1.04
PMFBP1-203ENST00000379073 TRAPPC3LQ5T215 181 aa8.52□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms