RNA–Protein interactions for RNA: ENST00000378540.8

PPM1B-203, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1B, humanhuman

TSL 2

Gene PPM1B, Length 1,703 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1B-203ENST00000378540 LINS1Q8NG48 757 aa29.14■■■□□ 2.26
PPM1B-203ENST00000378540 KCNQ4P56696 695 aa29.14■■■□□ 2.25
PPM1B-203ENST00000378540 GNAI2P04899 355 aa29.13■■■□□ 2.25
PPM1B-203ENST00000378540 CRKLP46109 303 aaKnown RBP29.13■■■□□ 2.25
PPM1B-203ENST00000378540 ZBTB3Q9H5J0 574 aa29.13■■■□□ 2.25
PPM1B-203ENST00000378540 CCDC87Q9NVE4 849 aa29.13■■■□□ 2.25
PPM1B-203ENST00000378540 UBTFL1P0CB47 393 aaPredicted RBP29.12■■■□□ 2.25
PPM1B-203ENST00000378540 IGKV5-2P06315 115 aa29.11■■■□□ 2.25
PPM1B-203ENST00000378540 INTS5Q6P9B9 1019 aaKnown RBP29.11■■■□□ 2.25
PPM1B-203ENST00000378540 KIF6Q6ZMV9 814 aa29.11■■■□□ 2.25
PPM1B-203ENST00000378540 NPM2Q86SE8 214 aaKnown RBP29.11■■■□□ 2.25
PPM1B-203ENST00000378540 C9orf78Q9NZ63 289 aaPredicted RBP29.11■■■□□ 2.25
PPM1B-203ENST00000378540 TRIM37O94972 964 aa29.1■■■□□ 2.25
PPM1B-203ENST00000378540 SIRT2Q8IXJ6 389 aa29.1■■■□□ 2.25
PPM1B-203ENST00000378540 ARFGEF2Q9Y6D5 1785 aa29.09■■■□□ 2.25
PPM1B-203ENST00000378540 ATP5J2-PTCD1G3V325 749 aa29.08■■■□□ 2.25
PPM1B-203ENST00000378540 NBPF7P0C2Y1 421 aaPredicted RBP29.08■■■□□ 2.25
PPM1B-203ENST00000378540 IL6STP40189 918 aaPredicted RBP29.08■■■□□ 2.25
PPM1B-203ENST00000378540 CEP85Q6P2H3 762 aa29.08■■■□□ 2.25
PPM1B-203ENST00000378540 RPAP2Q8IXW5 612 aaPredicted RBP29.08■■■□□ 2.25
PPM1B-203ENST00000378540 LINC00116Q8NCU8 138 aa29.08■■■□□ 2.25
PPM1B-203ENST00000378540 LRRFIP2Q9Y608 721 aaKnown RBP29.08■■■□□ 2.25
PPM1B-203ENST00000378540 NEURL1BA8MQ27 555 aa29.08■■■□□ 2.25
PPM1B-203ENST00000378540 ANKRD44Q8N8A2 993 aa29.08■■■□□ 2.25
PPM1B-203ENST00000378540 CCNL1Q9UK58 526 aaPredicted RBP29.08■■■□□ 2.25
PPM1B-203ENST00000378540 SKAP1Q86WV1 359 aa29.07■■■□□ 2.24
PPM1B-203ENST00000378540 CICQ96RK0 1608 aaPredicted RBP29.07■■■□□ 2.24
PPM1B-203ENST00000378540 ZNF831Q5JPB2 1677 aa29.05■■■□□ 2.24
PPM1B-203ENST00000378540 NUP188Q5SRE5 1749 aa29.05■■■□□ 2.24
PPM1B-203ENST00000378540 GRM8O00222 908 aa29.04■■■□□ 2.24
PPM1B-203ENST00000378540 GCKRQ14397 625 aa29.04■■■□□ 2.24
PPM1B-203ENST00000378540 EIF5P55010 431 aaKnown RBP29.03■■■□□ 2.24
PPM1B-203ENST00000378540 TBC1D2BQ9UPU7 963 aa29.03■■■□□ 2.24
PPM1B-203ENST00000378540 MAP3K15Q6ZN16 1313 aa29.03■■■□□ 2.24
PPM1B-203ENST00000378540 COL5A3P25940 1745 aaPredicted RBP29.03■■■□□ 2.24
PPM1B-203ENST00000378540 DZIP3Q86Y13 1208 aaKnown RBP29.03■■■□□ 2.24
PPM1B-203ENST00000378540 MYH14Q7Z406 1995 aaKnown RBP29.02■■■□□ 2.24
PPM1B-203ENST00000378540 AFDNP55196 1824 aaKnown RBP29.01■■■□□ 2.23
PPM1B-203ENST00000378540 LY75O60449 1722 aa29■■■□□ 2.23
PPM1B-203ENST00000378540 RREB1Q92766 1687 aa29■■■□□ 2.23
PPM1B-203ENST00000378540 ATP8B2P98198 1209 aa29■■■□□ 2.23
PPM1B-203ENST00000378540 TCIRG1Q13488 830 aa29■■■□□ 2.23
PPM1B-203ENST00000378540 HLFQ16534 295 aa29■■■□□ 2.23
PPM1B-203ENST00000378540 SMC5Q8IY18 1101 aa29■■■□□ 2.23
PPM1B-203ENST00000378540 JARID2Q92833 1246 aaPredicted RBP29■■■□□ 2.23
PPM1B-203ENST00000378540 PDZRN3Q9UPQ7 1066 aa29■■■□□ 2.23
PPM1B-203ENST00000378540 HMMRO75330 724 aa28.99■■■□□ 2.23
PPM1B-203ENST00000378540 HDAC5Q9UQL6 1122 aa28.99■■■□□ 2.23
PPM1B-203ENST00000378540 UTYO14607 1347 aa28.98■■■□□ 2.23
PPM1B-203ENST00000378540 CNTNAP4Q9C0A0 1308 aa28.98■■■□□ 2.23
PPM1B-203ENST00000378540 CWC25Q9NXE8 425 aaPredicted RBP28.98■■■□□ 2.23
PPM1B-203ENST00000378540 A0A087WZG4 1122 aa28.97■■■□□ 2.23
PPM1B-203ENST00000378540 GIGYF2Q6Y7W6 1299 aaKnown RBP28.97■■■□□ 2.23
PPM1B-203ENST00000378540 GCC1Q96CN9 775 aa28.97■■■□□ 2.23
PPM1B-203ENST00000378540 RC3H1Q5TC82 1133 aaKnown RBP28.97■■■□□ 2.23
PPM1B-203ENST00000378540 SUCLG2Q96I99 432 aa28.97■■■□□ 2.23
PPM1B-203ENST00000378540 PNMA6EA0A0J9YXQ4 647 aa28.96■■■□□ 2.23
PPM1B-203ENST00000378540 ERVV-1B6SEH8 477 aa28.96■■■□□ 2.23
PPM1B-203ENST00000378540 ISCA1Q9BUE6 129 aa28.96■■■□□ 2.23
PPM1B-203ENST00000378540 IBTKQ9P2D0 1353 aaPredicted RBP28.96■■■□□ 2.23
PPM1B-203ENST00000378540 RGS3P49796 1198 aa28.95■■■□□ 2.23
PPM1B-203ENST00000378540 UBE3BQ7Z3V4 1068 aa28.95■■■□□ 2.23
PPM1B-203ENST00000378540 CCDC191Q8NCU4 936 aa28.95■■■□□ 2.23
PPM1B-203ENST00000378540 EP400Q96L91 3159 aa28.95■■■□□ 2.22
PPM1B-203ENST00000378540 PPP1R42Q7Z4L9 355 aa28.94■■■□□ 2.22
PPM1B-203ENST00000378540 DCTPP1Q9H773 170 aa28.94■■■□□ 2.22
PPM1B-203ENST00000378540 COL15A1P39059 1388 aa28.94■■■□□ 2.22
PPM1B-203ENST00000378540 HSP90AB3PQ58FF7 597 aa28.94■■■□□ 2.22
PPM1B-203ENST00000378540 LRRC4BQ9NT99 713 aa28.94■■■□□ 2.22
PPM1B-203ENST00000378540 GPTP24298 496 aa28.93■■■□□ 2.22
PPM1B-203ENST00000378540 GNPATO15228 680 aa28.92■■■□□ 2.22
PPM1B-203ENST00000378540 RTL5Q5HYW3 569 aaPredicted RBP28.92■■■□□ 2.22
PPM1B-203ENST00000378540 ANKRD45Q5TZF3 282 aa28.92■■■□□ 2.22
PPM1B-203ENST00000378540 SMIM5Q71RC9 77 aa28.92■■■□□ 2.22
PPM1B-203ENST00000378540 APBA3O96018 575 aa28.91■■■□□ 2.22
PPM1B-203ENST00000378540 H7C1W4 665 aa28.91■■■□□ 2.22
PPM1B-203ENST00000378540 SRGAP3O43295 1099 aa28.91■■■□□ 2.22
PPM1B-203ENST00000378540 RPS6KA4O75676 772 aa28.91■■■□□ 2.22
PPM1B-203ENST00000378540 CAMTA2O94983 1202 aa28.91■■■□□ 2.22
PPM1B-203ENST00000378540 TRIM28Q13263 835 aaKnown RBP28.91■■■□□ 2.22
PPM1B-203ENST00000378540 KAZALD1Q96I82 304 aa28.91■■■□□ 2.22
PPM1B-203ENST00000378540 BICC1Q9H694 974 aaKnown RBP28.91■■■□□ 2.22
PPM1B-203ENST00000378540 TAF1LQ8IZX4 1826 aa28.91■■■□□ 2.22
PPM1B-203ENST00000378540 NUCB1Q02818 461 aa28.9■■■□□ 2.22
PPM1B-203ENST00000378540 SLC27A3Q5K4L6 730 aa28.9■■■□□ 2.22
PPM1B-203ENST00000378540 NUP98P52948 1817 aa28.89■■■□□ 2.22
PPM1B-203ENST00000378540 APBB1O00213 710 aa28.89■■■□□ 2.21
PPM1B-203ENST00000378540 SSH3Q8TE77 659 aa28.89■■■□□ 2.21
PPM1B-203ENST00000378540 AK7Q96M32 723 aa28.89■■■□□ 2.21
PPM1B-203ENST00000378540 RTCBQ9Y3I0 505 aaKnown RBP28.89■■■□□ 2.21
PPM1B-203ENST00000378540 CASP7P55210 303 aa28.88■■■□□ 2.21
PPM1B-203ENST00000378540 POLA2Q14181 598 aa28.87■■■□□ 2.21
PPM1B-203ENST00000378540 EPHA10Q5JZY3 1008 aa28.87■■■□□ 2.21
PPM1B-203ENST00000378540 NLRP10Q86W26 655 aa28.87■■■□□ 2.21
PPM1B-203ENST00000378540 CHD1LQ86WJ1 897 aa28.87■■■□□ 2.21
PPM1B-203ENST00000378540 LNPKQ9C0E8 428 aa28.87■■■□□ 2.21
PPM1B-203ENST00000378540 C4BP0C0L5 1744 aa28.87■■■□□ 2.21
PPM1B-203ENST00000378540 TXNRD1Q16881 649 aa28.86■■■□□ 2.21
PPM1B-203ENST00000378540 BCL11AQ9H165 835 aa28.86■■■□□ 2.21
PPM1B-203ENST00000378540 EXOC6BQ9Y2D4 811 aa28.86■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms