RNA–Protein interactions for RNA: ENST00000378406.5

CCDC107-202, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC107, Length 1,016 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-202ENST00000378406 RSPH6AQ9H0K4 717 aa26.27■■□□□ 1.8
CCDC107-202ENST00000378406 TAOK3Q9H2K8 898 aa26.27■■□□□ 1.8
CCDC107-202ENST00000378406 CACNA1SQ13698 1873 aa26.27■■□□□ 1.8
CCDC107-202ENST00000378406 PRPF40BQ6NWY9 871 aaKnown RBP26.26■■□□□ 1.79
CCDC107-202ENST00000378406 CNKSR1Q969H4 720 aa26.26■■□□□ 1.79
CCDC107-202ENST00000378406 USP16Q9Y5T5 823 aa26.26■■□□□ 1.79
CCDC107-202ENST00000378406 ARFGEF2Q9Y6D5 1785 aa26.25■■□□□ 1.79
CCDC107-202ENST00000378406 NPHP1O15259 732 aa26.25■■□□□ 1.79
CCDC107-202ENST00000378406 ST5P78524 1137 aa26.25■■□□□ 1.79
CCDC107-202ENST00000378406 PIP4K2AP48426 406 aaPredicted RBP26.24■■□□□ 1.79
CCDC107-202ENST00000378406 PRAMEF22A3QJZ6 481 aa26.23■■□□□ 1.79
CCDC107-202ENST00000378406 HSPA1AP0DMV8 641 aaKnown RBP26.23■■□□□ 1.79
CCDC107-202ENST00000378406 HSPA1BP0DMV9 641 aaKnown RBP26.23■■□□□ 1.79
CCDC107-202ENST00000378406 MASTLQ96GX5 879 aa26.23■■□□□ 1.79
CCDC107-202ENST00000378406 DDNO94850 711 aaPredicted RBP26.22■■□□□ 1.79
CCDC107-202ENST00000378406 TNS4Q8IZW8 715 aa26.22■■□□□ 1.79
CCDC107-202ENST00000378406 SOGA3Q5TF21 947 aa26.21■■□□□ 1.79
CCDC107-202ENST00000378406 CLEC4GQ6UXB4 293 aa26.21■■□□□ 1.79
CCDC107-202ENST00000378406 POTEIP0CG38 1075 aa26.2■■□□□ 1.78
CCDC107-202ENST00000378406 POTEJP0CG39 1038 aa26.2■■□□□ 1.78
CCDC107-202ENST00000378406 CHADLQ6NUI6 762 aa26.2■■□□□ 1.78
CCDC107-202ENST00000378406 CFAP53Q96M91 514 aa26.2■■□□□ 1.78
CCDC107-202ENST00000378406 NBPF5PQ86XG9 351 aaPredicted RBP26.19■■□□□ 1.78
CCDC107-202ENST00000378406 C7orf43Q8WVR3 580 aa26.19■■□□□ 1.78
CCDC107-202ENST00000378406 SNRPA1P09661 255 aaKnown RBP26.18■■□□□ 1.78
CCDC107-202ENST00000378406 MCM10Q7L590 875 aa26.18■■□□□ 1.78
CCDC107-202ENST00000378406 CAPN15O75808 1086 aa26.17■■□□□ 1.78
CCDC107-202ENST00000378406 CREBZFQ9NS37 354 aa26.17■■□□□ 1.78
CCDC107-202ENST00000378406 ZNF652Q9Y2D9 606 aa26.17■■□□□ 1.78
CCDC107-202ENST00000378406 NUDCQ9Y266 331 aa26.16■■□□□ 1.78
CCDC107-202ENST00000378406 KLRG2A4D1S0 409 aaPredicted RBP26.15■■□□□ 1.78
CCDC107-202ENST00000378406 NBPF26B4DH59 902 aa26.15■■□□□ 1.78
CCDC107-202ENST00000378406 NPR1P16066 1061 aa26.15■■□□□ 1.78
CCDC107-202ENST00000378406 NBPF10Q6P3W6 841 aaKnown RBP26.15■■□□□ 1.78
CCDC107-202ENST00000378406 NBPF15Q8N660 670 aa26.15■■□□□ 1.78
CCDC107-202ENST00000378406 RTF1Q92541 710 aaKnown RBP26.15■■□□□ 1.78
CCDC107-202ENST00000378406 U2AF1L5P0DN76 240 aaPredicted RBP26.14■■□□□ 1.78
CCDC107-202ENST00000378406 U2AF1Q01081 240 aaKnown RBP eCLIP26.14■■□□□ 1.78
CCDC107-202ENST00000378406 CCDC93Q567U6 631 aa26.14■■□□□ 1.78
CCDC107-202ENST00000378406 L3MBTL3Q96JM7 780 aaPredicted RBP26.14■■□□□ 1.78
CCDC107-202ENST00000378406 RGL2O15211 777 aa26.13■■□□□ 1.77
CCDC107-202ENST00000378406 DCTN1Q14203 1278 aa26.13■■□□□ 1.77
CCDC107-202ENST00000378406 SCN4AP35499 1836 aa26.13■■□□□ 1.77
CCDC107-202ENST00000378406 IQCA1LA6NCM1 817 aa26.12■■□□□ 1.77
CCDC107-202ENST00000378406 TPTE2Q6XPS3 522 aa26.12■■□□□ 1.77
CCDC107-202ENST00000378406 MKRN1Q9UHC7 482 aaKnown RBP26.12■■□□□ 1.77
CCDC107-202ENST00000378406 NIP7Q9Y221 180 aaKnown RBP eCLIP26.12■■□□□ 1.77
CCDC107-202ENST00000378406 PPP2R1AP30153 589 aa26.11■■□□□ 1.77
CCDC107-202ENST00000378406 FKBP4Q02790 459 aaKnown RBP eCLIP26.11■■□□□ 1.77
CCDC107-202ENST00000378406 TAF1DQ9H5J8 278 aaPredicted RBP26.11■■□□□ 1.77
CCDC107-202ENST00000378406 OLFM4Q6UX06 510 aa26.1■■□□□ 1.77
CCDC107-202ENST00000378406 LDHDQ86WU2 507 aa26.1■■□□□ 1.77
CCDC107-202ENST00000378406 PASKQ96RG2 1323 aa26.1■■□□□ 1.77
CCDC107-202ENST00000378406 HTATSF1O43719 755 aaKnown RBP26.09■■□□□ 1.77
CCDC107-202ENST00000378406 ZNF277Q9NRM2 450 aaPredicted RBP26.09■■□□□ 1.77
CCDC107-202ENST00000378406 ZNF541Q9H0D2 1346 aa26.09■■□□□ 1.77
CCDC107-202ENST00000378406 FAM177BA6PVY3 158 aa26.08■■□□□ 1.77
CCDC107-202ENST00000378406 HLFQ16534 295 aa26.08■■□□□ 1.77
CCDC107-202ENST00000378406 LAMB4A4D0S4 1761 aa26.07■■□□□ 1.76
CCDC107-202ENST00000378406 CNTNAP1P78357 1384 aa26.07■■□□□ 1.76
CCDC107-202ENST00000378406 TAF7Q15545 349 aaPredicted RBP26.06■■□□□ 1.76
CCDC107-202ENST00000378406 RTKN2Q8IZC4 609 aa26.06■■□□□ 1.76
CCDC107-202ENST00000378406 MIS18AQ9NYP9 233 aa26.05■■□□□ 1.76
CCDC107-202ENST00000378406 ITGBL1O95965 494 aaPredicted RBP26.04■■□□□ 1.76
CCDC107-202ENST00000378406 ADAMTSL1Q8N6G6 1762 aa26.04■■□□□ 1.76
CCDC107-202ENST00000378406 ALDH1B1P30837 517 aa26.03■■□□□ 1.76
CCDC107-202ENST00000378406 HACL1Q9UJ83 578 aa26.03■■□□□ 1.76
CCDC107-202ENST00000378406 SNED1Q8TER0 1413 aa26.03■■□□□ 1.76
CCDC107-202ENST00000378406 FZD9O00144 591 aa26.02■■□□□ 1.76
CCDC107-202ENST00000378406 IARSP41252 1262 aaKnown RBP26.02■■□□□ 1.76
CCDC107-202ENST00000378406 EAPPQ56P03 285 aaPredicted RBP26.02■■□□□ 1.76
CCDC107-202ENST00000378406 SYNE4Q8N205 404 aa26.02■■□□□ 1.76
CCDC107-202ENST00000378406 ABCC12Q96J65 1359 aa26.02■■□□□ 1.76
CCDC107-202ENST00000378406 GTF2E1P29083 439 aaPredicted RBP26.01■■□□□ 1.75
CCDC107-202ENST00000378406 CRY2Q49AN0 593 aa26.01■■□□□ 1.75
CCDC107-202ENST00000378406 KDM3BQ7LBC6 1761 aa26■■□□□ 1.75
CCDC107-202ENST00000378406 TMEM88BA6NKF7 163 aa26■■□□□ 1.75
CCDC107-202ENST00000378406 FOXN1O15353 648 aa26■■□□□ 1.75
CCDC107-202ENST00000378406 EPHX2P34913 555 aa26■■□□□ 1.75
CCDC107-202ENST00000378406 NUP98P52948 1817 aa26■■□□□ 1.75
CCDC107-202ENST00000378406 RNF123Q5XPI4 1314 aa25.99■■□□□ 1.75
CCDC107-202ENST00000378406 DLG5Q8TDM6 1919 aa25.99■■□□□ 1.75
CCDC107-202ENST00000378406 NUTM1Q86Y26 1132 aa25.99■■□□□ 1.75
CCDC107-202ENST00000378406 NGEFQ8N5V2 710 aa25.99■■□□□ 1.75
CCDC107-202ENST00000378406 ERVV-1B6SEH8 477 aa25.98■■□□□ 1.75
CCDC107-202ENST00000378406 VEGFBP49765 207 aa25.98■■□□□ 1.75
CCDC107-202ENST00000378406 PSMD1Q99460 953 aa25.98■■□□□ 1.75
CCDC107-202ENST00000378406 NYXQ9GZU5 481 aa25.98■■□□□ 1.75
CCDC107-202ENST00000378406 CLEC11AQ9Y240 323 aa25.98■■□□□ 1.75
CCDC107-202ENST00000378406 MAP3K15Q6ZN16 1313 aa25.97■■□□□ 1.75
CCDC107-202ENST00000378406 GPC2Q8N158 579 aa25.97■■□□□ 1.75
CCDC107-202ENST00000378406 TTLL7Q6ZT98 887 aa25.96■■□□□ 1.75
CCDC107-202ENST00000378406 PNMA8AQ86V59 439 aaPredicted RBP25.96■■□□□ 1.75
CCDC107-202ENST00000378406 PNISRQ8TF01 805 aaKnown RBP25.96■■□□□ 1.75
CCDC107-202ENST00000378406 COL4A5P29400 1685 aa25.96■■□□□ 1.75
CCDC107-202ENST00000378406 EIF4A1P60842 406 aaKnown RBP25.95■■□□□ 1.74
CCDC107-202ENST00000378406 UBN2Q6ZU65 1347 aa25.94■■□□□ 1.74
CCDC107-202ENST00000378406 MAP1SQ66K74 1059 aaPredicted RBP25.94■■□□□ 1.74
CCDC107-202ENST00000378406 CC2D2BQ6DHV5 1058 aa25.94■■□□□ 1.74
CCDC107-202ENST00000378406 CNTROBQ8N137 903 aa25.94■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms