RNA–Protein interactions for RNA: ENST00000378204.6

EXT1-201, Transcript of exostosin glycosyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXT1, Length 8,270 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1-201ENST00000378204 CNNM3Q8NE01 707 aa17.21■□□□□ 0.35
EXT1-201ENST00000378204 MYD88Q99836 296 aa17.21■□□□□ 0.35
EXT1-201ENST00000378204 GOLGA6L9A6NEM1 432 aa17.21■□□□□ 0.35
EXT1-201ENST00000378204 SLC5A1P13866 664 aa17.21■□□□□ 0.35
EXT1-201ENST00000378204 XPCQ01831 940 aaPredicted RBP17.21■□□□□ 0.35
EXT1-201ENST00000378204 SSRP1Q08945 709 aaKnown RBP17.2■□□□□ 0.34
EXT1-201ENST00000378204 CLIP2Q9UDT6 1046 aa17.2■□□□□ 0.34
EXT1-201ENST00000378204 NEMFO60524 1076 aa17.2■□□□□ 0.34
EXT1-201ENST00000378204 CATIPQ7Z7H3 387 aa17.2■□□□□ 0.34
EXT1-201ENST00000378204 SLF2Q8IX21 1173 aa17.2■□□□□ 0.34
EXT1-201ENST00000378204 RANBP6O60518 1105 aaKnown RBP17.2■□□□□ 0.34
EXT1-201ENST00000378204 URI1O94763 535 aaPredicted RBP17.2■□□□□ 0.34
EXT1-201ENST00000378204 A0A087WZG4 1122 aa17.2■□□□□ 0.34
EXT1-201ENST00000378204 GBP6Q6ZN66 633 aa17.2■□□□□ 0.34
EXT1-201ENST00000378204 CCDC150Q8NCX0 1101 aa17.2■□□□□ 0.34
EXT1-201ENST00000378204 CCDC94Q9BW85 323 aaPredicted RBP17.2■□□□□ 0.34
EXT1-201ENST00000378204 TOPBP1Q92547 1522 aa17.19■□□□□ 0.34
EXT1-201ENST00000378204 GSDMDP57764 484 aa17.19■□□□□ 0.34
EXT1-201ENST00000378204 DBF4Q9UBU7 674 aaPredicted RBP17.19■□□□□ 0.34
EXT1-201ENST00000378204 PRXQ9BXM0 1461 aa17.19■□□□□ 0.34
EXT1-201ENST00000378204 NUP88Q99567 741 aaPredicted RBP17.19■□□□□ 0.34
EXT1-201ENST00000378204 BANK1Q8NDB2 785 aa17.19■□□□□ 0.34
EXT1-201ENST00000378204 RNF168Q8IYW5 571 aaPredicted RBP17.19■□□□□ 0.34
EXT1-201ENST00000378204 DDX19AQ9NUU7 478 aaKnown RBP17.19■□□□□ 0.34
EXT1-201ENST00000378204 EVI5LQ96CN4 794 aa17.19■□□□□ 0.34
EXT1-201ENST00000378204 GSTTP1A0A1W2PQM5 241 aa17.18■□□□□ 0.34
EXT1-201ENST00000378204 GOLGA8BA8MQT2 603 aa17.18■□□□□ 0.34
EXT1-201ENST00000378204 LMAN1P49257 510 aa17.18■□□□□ 0.34
EXT1-201ENST00000378204 PPM1EQ8WY54 764 aa17.18■□□□□ 0.34
EXT1-201ENST00000378204 IQGAP2Q13576 1575 aa17.18■□□□□ 0.34
EXT1-201ENST00000378204 CUL7Q14999 1698 aa17.18■□□□□ 0.34
EXT1-201ENST00000378204 IFIT3O14879 490 aaKnown RBP17.18■□□□□ 0.34
EXT1-201ENST00000378204 CCDC113Q9H0I3 377 aa17.18■□□□□ 0.34
EXT1-201ENST00000378204 CUL5Q93034 780 aa17.18■□□□□ 0.34
EXT1-201ENST00000378204 NAIPQ13075 1403 aa17.18■□□□□ 0.34
EXT1-201ENST00000378204 CETN1Q12798 172 aa17.18■□□□□ 0.34
EXT1-201ENST00000378204 GUCY1B3Q02153 619 aa17.18■□□□□ 0.34
EXT1-201ENST00000378204 CCDC194A0A1B0GVG4 234 aa17.18■□□□□ 0.34
EXT1-201ENST00000378204 POTEB2H3BUK9 544 aa17.18■□□□□ 0.34
EXT1-201ENST00000378204 IFFO1Q0D2I5 559 aa17.18■□□□□ 0.34
EXT1-201ENST00000378204 UBA5Q9GZZ9 404 aa17.17■□□□□ 0.34
EXT1-201ENST00000378204 SPDYE4A6NLX3 237 aa17.17■□□□□ 0.34
EXT1-201ENST00000378204 SNAPC4Q5SXM2 1469 aa17.17■□□□□ 0.34
EXT1-201ENST00000378204 PYM1Q9BRP8 204 aaKnown RBP17.17■□□□□ 0.34
EXT1-201ENST00000378204 TAOK3Q9H2K8 898 aa17.17■□□□□ 0.34
EXT1-201ENST00000378204 LRPPRCP42704 1394 aaKnown RBP17.17■□□□□ 0.34
EXT1-201ENST00000378204 YEATS4O95619 227 aa17.17■□□□□ 0.34
EXT1-201ENST00000378204 HSPA4P34932 840 aa17.17■□□□□ 0.34
EXT1-201ENST00000378204 CCDC82Q8N4S0 544 aa17.17■□□□□ 0.34
EXT1-201ENST00000378204 TCHPQ9BT92 498 aa17.17■□□□□ 0.34
EXT1-201ENST00000378204 HOOK3Q86VS8 718 aa17.17■□□□□ 0.34
EXT1-201ENST00000378204 CAVIN2O95810 425 aa17.16■□□□□ 0.34
EXT1-201ENST00000378204 NLRP5P59047 1200 aa17.16■□□□□ 0.34
EXT1-201ENST00000378204 AMPD3Q01432 767 aa17.16■□□□□ 0.34
EXT1-201ENST00000378204 CDK13Q14004 1512 aaKnown RBP17.16■□□□□ 0.34
EXT1-201ENST00000378204 CCDC8Q9H0W5 538 aaPredicted RBP17.16■□□□□ 0.34
EXT1-201ENST00000378204 GCOM1H8Y6P7 765 aaPredicted RBP17.16■□□□□ 0.34
EXT1-201ENST00000378204 MYZAPP0CAP1 466 aa17.16■□□□□ 0.34
EXT1-201ENST00000378204 CCDC96Q2M329 555 aa17.16■□□□□ 0.34
EXT1-201ENST00000378204 CCDC178Q5BJE1 867 aa17.16■□□□□ 0.34
EXT1-201ENST00000378204 NAA15Q9BXJ9 866 aaKnown RBP17.16■□□□□ 0.34
EXT1-201ENST00000378204 DHX29Q7Z478 1369 aaKnown RBP17.16■□□□□ 0.34
EXT1-201ENST00000378204 FSIP1Q8NA03 581 aa17.16■□□□□ 0.34
EXT1-201ENST00000378204 CCDC12Q8WUD4 166 aaPredicted RBP17.16■□□□□ 0.34
EXT1-201ENST00000378204 EHMT1Q9H9B1 1298 aa17.16■□□□□ 0.34
EXT1-201ENST00000378204 WAPLQ7Z5K2 1190 aa17.16■□□□□ 0.34
EXT1-201ENST00000378204 TCP11L1Q9NUJ3 509 aa17.16■□□□□ 0.34
EXT1-201ENST00000378204 SMARCC1Q92922 1105 aaPredicted RBP17.16■□□□□ 0.34
EXT1-201ENST00000378204 RSRC1Q96IZ7 334 aaKnown RBP17.16■□□□□ 0.34
EXT1-201ENST00000378204 ANKRD18BA2A2Z9 1011 aa17.16■□□□□ 0.34
EXT1-201ENST00000378204 TTF1Q15361 905 aaPredicted RBP17.16■□□□□ 0.34
EXT1-201ENST00000378204 STX1AQ16623 288 aa17.16■□□□□ 0.34
EXT1-201ENST00000378204 GIGYF2Q6Y7W6 1299 aaKnown RBP17.16■□□□□ 0.34
EXT1-201ENST00000378204 A0A1B0GUL7 405 aa17.15■□□□□ 0.34
EXT1-201ENST00000378204 PSMD1Q99460 953 aa17.15■□□□□ 0.34
EXT1-201ENST00000378204 DNMBPQ6XZF7 1577 aa17.15■□□□□ 0.34
EXT1-201ENST00000378204 KIF5BP33176 963 aa17.15■□□□□ 0.34
EXT1-201ENST00000378204 CCDC175P0C221 793 aa17.15■□□□□ 0.34
EXT1-201ENST00000378204 TDRD12Q587J7 1177 aaKnown RBP17.15■□□□□ 0.34
EXT1-201ENST00000378204 KANK3Q6NY19 840 aa17.15■□□□□ 0.34
EXT1-201ENST00000378204 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.15■□□□□ 0.34
EXT1-201ENST00000378204 GOLIM4O00461 696 aa17.14■□□□□ 0.34
EXT1-201ENST00000378204 KIF3CO14782 793 aa17.14■□□□□ 0.34
EXT1-201ENST00000378204 CALML4Q96GE6 196 aa17.14■□□□□ 0.34
EXT1-201ENST00000378204 TRMT112Q9UI30 125 aaKnown RBP17.14■□□□□ 0.34
EXT1-201ENST00000378204 CKAP2LQ8IYA6 745 aa17.14■□□□□ 0.33
EXT1-201ENST00000378204 ZNF622Q969S3 477 aaKnown RBP eCLIP17.14■□□□□ 0.33
EXT1-201ENST00000378204 PCF11O94913 1555 aaKnown RBP17.14■□□□□ 0.33
EXT1-201ENST00000378204 F6X3S4 739 aa17.14■□□□□ 0.33
EXT1-201ENST00000378204 GOPCQ9HD26 462 aa17.14■□□□□ 0.33
EXT1-201ENST00000378204 CCT2P78371 535 aaKnown RBP17.14■□□□□ 0.33
EXT1-201ENST00000378204 CCDC97Q96F63 343 aaPredicted RBP17.14■□□□□ 0.33
EXT1-201ENST00000378204 ARHGEF11O15085 1522 aa17.14■□□□□ 0.33
EXT1-201ENST00000378204 BAG4O95429 457 aaKnown RBP17.14■□□□□ 0.33
EXT1-201ENST00000378204 SPECC1LQ69YQ0 1117 aa17.14■□□□□ 0.33
EXT1-201ENST00000378204 CEP83Q9Y592 693 aa17.14■□□□□ 0.33
EXT1-201ENST00000378204 GOLGA8AA7E2F4 631 aa17.14■□□□□ 0.33
EXT1-201ENST00000378204 SPECC1Q5M775 1068 aa17.14■□□□□ 0.33
EXT1-201ENST00000378204 CFAP65Q6ZU64 1925 aaKnown RBP17.13■□□□□ 0.33
EXT1-201ENST00000378204 STX6O43752 255 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms