RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 DIAPH3Q9NSV4 1193 aa21.94■■□□□ 1.1
TDP2-202ENST00000378198 ECHDC1Q9NTX5 307 aa21.94■■□□□ 1.1
TDP2-202ENST00000378198 HYPKQ9NX55 129 aa21.94■■□□□ 1.1
TDP2-202ENST00000378198 ANKRD24Q8TF21 1146 aa21.93■■□□□ 1.1
TDP2-202ENST00000378198 LIMCH1Q9UPQ0 1083 aa21.92■■□□□ 1.1
TDP2-202ENST00000378198 RGPD5Q99666 1765 aa21.92■■□□□ 1.1
TDP2-202ENST00000378198 TRPM3Q9HCF6 1732 aaPredicted RBP21.92■■□□□ 1.1
TDP2-202ENST00000378198 MSNP26038 577 aaKnown RBP21.92■■□□□ 1.1
TDP2-202ENST00000378198 AK2P54819 239 aa21.92■■□□□ 1.1
TDP2-202ENST00000378198 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.92■■□□□ 1.1
TDP2-202ENST00000378198 IFIT2P09913 472 aaKnown RBP21.91■■□□□ 1.1
TDP2-202ENST00000378198 RASEFQ8IZ41 740 aa21.91■■□□□ 1.1
TDP2-202ENST00000378198 RPAP1Q9BWH6 1393 aaPredicted RBP21.91■■□□□ 1.1
TDP2-202ENST00000378198 PROSER3Q2NL68 480 aa21.91■■□□□ 1.1
TDP2-202ENST00000378198 LINS1Q8NG48 757 aa21.91■■□□□ 1.1
TDP2-202ENST00000378198 DDX58O95786 925 aaKnown RBP21.9■■□□□ 1.1
TDP2-202ENST00000378198 SPG7Q9UQ90 795 aa21.9■■□□□ 1.1
TDP2-202ENST00000378198 UTYO14607 1347 aa21.89■■□□□ 1.1
TDP2-202ENST00000378198 TMEM87AQ8NBN3 555 aa21.89■■□□□ 1.1
TDP2-202ENST00000378198 EVI5LQ96CN4 794 aa21.89■■□□□ 1.1
TDP2-202ENST00000378198 PHF14O94880 888 aa21.89■■□□□ 1.09
TDP2-202ENST00000378198 CWF19L2Q2TBE0 894 aaKnown RBP21.88■■□□□ 1.09
TDP2-202ENST00000378198 RUFY3Q7L099 469 aa21.88■■□□□ 1.09
TDP2-202ENST00000378198 USP48Q86UV5 1035 aa21.88■■□□□ 1.09
TDP2-202ENST00000378198 KCNB2Q92953 911 aa21.88■■□□□ 1.09
TDP2-202ENST00000378198 ORAI2Q96SN7 254 aa21.88■■□□□ 1.09
TDP2-202ENST00000378198 DDX21Q9NR30 783 aaKnown RBP eCLIP21.88■■□□□ 1.09
TDP2-202ENST00000378198 GRM8O00222 908 aa21.87■■□□□ 1.09
TDP2-202ENST00000378198 TM6SF1Q9BZW5 370 aa21.87■■□□□ 1.09
TDP2-202ENST00000378198 TSPY26PQ9H489 355 aa21.87■■□□□ 1.09
TDP2-202ENST00000378198 SCN11AQ9UI33 1791 aa21.87■■□□□ 1.09
TDP2-202ENST00000378198 ZSCAN22P10073 491 aaPredicted RBP21.87■■□□□ 1.09
TDP2-202ENST00000378198 CASTP20810 708 aaKnown RBP21.87■■□□□ 1.09
TDP2-202ENST00000378198 NOL7Q9UMY1 257 aaKnown RBP21.87■■□□□ 1.09
TDP2-202ENST00000378198 PA2G4Q9UQ80 394 aaKnown RBP21.87■■□□□ 1.09
TDP2-202ENST00000378198 KIF1AQ12756 1690 aa21.87■■□□□ 1.09
TDP2-202ENST00000378198 HIP1O00291 1037 aa21.86■■□□□ 1.09
TDP2-202ENST00000378198 VPS53Q5VIR6 699 aa21.86■■□□□ 1.09
TDP2-202ENST00000378198 ZSCAN31Q96LW9 406 aaPredicted RBP21.86■■□□□ 1.09
TDP2-202ENST00000378198 SMC3Q9UQE7 1217 aa21.86■■□□□ 1.09
TDP2-202ENST00000378198 PRAMEF22A3QJZ6 481 aa21.86■■□□□ 1.09
TDP2-202ENST00000378198 STX6O43752 255 aa21.86■■□□□ 1.09
TDP2-202ENST00000378198 AACSQ86V21 672 aa21.86■■□□□ 1.09
TDP2-202ENST00000378198 SUCLG2Q96I99 432 aa21.86■■□□□ 1.09
TDP2-202ENST00000378198 PTH1RQ03431 593 aa21.85■■□□□ 1.09
TDP2-202ENST00000378198 G3BP1Q13283 466 aaKnown RBP eCLIP21.85■■□□□ 1.09
TDP2-202ENST00000378198 ATP6V1DQ9Y5K8 247 aa21.85■■□□□ 1.09
TDP2-202ENST00000378198 NPHP4O75161 1426 aaPredicted RBP21.85■■□□□ 1.09
TDP2-202ENST00000378198 GADD45BO75293 160 aaPredicted RBP21.84■■□□□ 1.09
TDP2-202ENST00000378198 XPCQ01831 940 aaPredicted RBP21.84■■□□□ 1.09
TDP2-202ENST00000378198 LMOD2Q6P5Q4 547 aa21.84■■□□□ 1.09
TDP2-202ENST00000378198 GDPD2Q9HCC8 539 aa21.84■■□□□ 1.09
TDP2-202ENST00000378198 ZSWIM6Q9HCJ5 1215 aa21.84■■□□□ 1.09
TDP2-202ENST00000378198 C5P01031 1676 aa21.84■■□□□ 1.09
TDP2-202ENST00000378198 SYT1P21579 422 aa21.84■■□□□ 1.09
TDP2-202ENST00000378198 FOXD4L6Q3SYB3 417 aaPredicted RBP21.84■■□□□ 1.09
TDP2-202ENST00000378198 FOXD4L3Q6VB84 417 aaPredicted RBP21.84■■□□□ 1.09
TDP2-202ENST00000378198 SH2B1Q9NRF2 756 aaPredicted RBP21.84■■□□□ 1.09
TDP2-202ENST00000378198 PDRG1Q9NUG6 133 aa21.84■■□□□ 1.09
TDP2-202ENST00000378198 AXIN2Q9Y2T1 843 aa21.84■■□□□ 1.09
TDP2-202ENST00000378198 CYP46A1Q9Y6A2 500 aa21.84■■□□□ 1.09
TDP2-202ENST00000378198 SASH1O94885 1247 aa21.83■■□□□ 1.09
TDP2-202ENST00000378198 PRPF40BQ6NWY9 871 aaKnown RBP21.83■■□□□ 1.09
TDP2-202ENST00000378198 KAZALD1Q96I82 304 aa21.83■■□□□ 1.09
TDP2-202ENST00000378198 JAKMIP1Q96N16 626 aaKnown RBP21.83■■□□□ 1.09
TDP2-202ENST00000378198 NECTIN1Q15223 517 aa21.83■■□□□ 1.08
TDP2-202ENST00000378198 KRT28Q7Z3Y7 464 aa21.83■■□□□ 1.08
TDP2-202ENST00000378198 BICC1Q9H694 974 aaKnown RBP21.83■■□□□ 1.08
TDP2-202ENST00000378198 CCDC171Q6TFL3 1326 aa21.82■■□□□ 1.08
TDP2-202ENST00000378198 OFD1O75665 1012 aa21.82■■□□□ 1.08
TDP2-202ENST00000378198 F13A1P00488 732 aa21.82■■□□□ 1.08
TDP2-202ENST00000378198 PDIA6Q15084 440 aa21.82■■□□□ 1.08
TDP2-202ENST00000378198 LARP1Q6PKG0 1096 aaKnown RBP21.82■■□□□ 1.08
TDP2-202ENST00000378198 CCDC39Q9UFE4 941 aa21.82■■□□□ 1.08
TDP2-202ENST00000378198 MST1RQ04912 1400 aa21.82■■□□□ 1.08
TDP2-202ENST00000378198 ZNF500O60304 480 aaPredicted RBP21.81■■□□□ 1.08
TDP2-202ENST00000378198 ZKSCAN1P17029 563 aaPredicted RBP21.81■■□□□ 1.08
TDP2-202ENST00000378198 MCM5P33992 734 aa21.81■■□□□ 1.08
TDP2-202ENST00000378198 LETM1O95202 739 aaPredicted RBP21.81■■□□□ 1.08
TDP2-202ENST00000378198 TPM2P07951 284 aa21.81■■□□□ 1.08
TDP2-202ENST00000378198 CPA1P15085 419 aa21.81■■□□□ 1.08
TDP2-202ENST00000378198 AIMP1Q12904 312 aaKnown RBP21.81■■□□□ 1.08
TDP2-202ENST00000378198 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.81■■□□□ 1.08
TDP2-202ENST00000378198 RIC3Q7Z5B4 369 aa21.81■■□□□ 1.08
TDP2-202ENST00000378198 EAF2Q96CJ1 260 aaPredicted RBP21.81■■□□□ 1.08
TDP2-202ENST00000378198 LARP6Q9BRS8 491 aaKnown RBP21.81■■□□□ 1.08
TDP2-202ENST00000378198 SNRKQ9NRH2 765 aa21.81■■□□□ 1.08
TDP2-202ENST00000378198 CNPY2Q9Y2B0 182 aa21.81■■□□□ 1.08
TDP2-202ENST00000378198 ADCK5Q3MIX3 580 aa21.8■■□□□ 1.08
TDP2-202ENST00000378198 RNF214Q8ND24 703 aa21.8■■□□□ 1.08
TDP2-202ENST00000378198 ALS2Q96Q42 1657 aa21.8■■□□□ 1.08
TDP2-202ENST00000378198 LARGE1O95461 756 aa21.79■■□□□ 1.08
TDP2-202ENST00000378198 UBE2HP62256 183 aa21.79■■□□□ 1.08
TDP2-202ENST00000378198 NEXNQ0ZGT2 675 aa21.79■■□□□ 1.08
TDP2-202ENST00000378198 CCDC183Q5T5S1 534 aa21.79■■□□□ 1.08
TDP2-202ENST00000378198 ZNF790Q6PG37 636 aa21.79■■□□□ 1.08
TDP2-202ENST00000378198 KLHL34Q8N239 644 aa21.79■■□□□ 1.08
TDP2-202ENST00000378198 FAM184AQ8NB25 1140 aa21.79■■□□□ 1.08
TDP2-202ENST00000378198 MAP4K1Q92918 833 aa21.79■■□□□ 1.08
TDP2-202ENST00000378198 ZKSCAN5Q9Y2L8 839 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms