RNA–Protein interactions for RNA: ENST00000377617.7

ATXN2-201, Transcript of ataxin 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATXN2, Length 4,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN2-201ENST00000377617 DNAJC21Q5F1R6 531 aaKnown RBP19.25■□□□□ 0.67
ATXN2-201ENST00000377617 LARP1Q6PKG0 1096 aaKnown RBP19.25■□□□□ 0.67
ATXN2-201ENST00000377617 SCLT1Q96NL6 688 aa19.25■□□□□ 0.67
ATXN2-201ENST00000377617 MATR3P43243 847 aaKnown RBP eCLIP19.25■□□□□ 0.671e-10■■■■■ 41.7
ATXN2-201ENST00000377617 USP48Q86UV5 1035 aa19.24■□□□□ 0.67
ATXN2-201ENST00000377617 NUTM1Q86Y26 1132 aa19.24■□□□□ 0.67
ATXN2-201ENST00000377617 SETSIPP0DME0 302 aa19.24■□□□□ 0.67
ATXN2-201ENST00000377617 FAM114A1Q8IWE2 563 aa19.24■□□□□ 0.67
ATXN2-201ENST00000377617 C8orf34Q49A92 452 aa19.24■□□□□ 0.67
ATXN2-201ENST00000377617 DDX46Q7L014 1031 aaKnown RBP19.24■□□□□ 0.67
ATXN2-201ENST00000377617 ERBINQ96RT1 1412 aa19.24■□□□□ 0.67
ATXN2-201ENST00000377617 ANAPC15P60006 121 aa19.23■□□□□ 0.67
ATXN2-201ENST00000377617 CCDC50Q8IVM0 306 aa19.23■□□□□ 0.67
ATXN2-201ENST00000377617 CEP126Q9P2H0 1117 aa19.23■□□□□ 0.67
ATXN2-201ENST00000377617 N4BP3O15049 544 aa19.23■□□□□ 0.67
ATXN2-201ENST00000377617 MTIF2P46199 727 aaKnown RBP19.23■□□□□ 0.67
ATXN2-201ENST00000377617 PLEKHO1Q53GL0 409 aaPredicted RBP19.23■□□□□ 0.67
ATXN2-201ENST00000377617 PIBF1Q8WXW3 757 aa19.23■□□□□ 0.67
ATXN2-201ENST00000377617 GTF3C6Q969F1 213 aa19.23■□□□□ 0.67
ATXN2-201ENST00000377617 SYT1P21579 422 aa19.23■□□□□ 0.67
ATXN2-201ENST00000377617 CFAP57Q96MR6 1250 aa19.23■□□□□ 0.67
ATXN2-201ENST00000377617 AKR1B10O60218 316 aa19.23■□□□□ 0.67
ATXN2-201ENST00000377617 JPH4Q96JJ6 628 aa19.23■□□□□ 0.67
ATXN2-201ENST00000377617 SLC12A5Q9H2X9 1139 aa19.23■□□□□ 0.67
ATXN2-201ENST00000377617 CFAP70Q5T0N1 1121 aa19.22■□□□□ 0.67
ATXN2-201ENST00000377617 CPLX4Q7Z7G2 160 aa19.22■□□□□ 0.67
ATXN2-201ENST00000377617 RNF216Q9NWF9 866 aaPredicted RBP19.22■□□□□ 0.67
ATXN2-201ENST00000377617 KIAA1107Q9UPP5 1409 aa19.22■□□□□ 0.67
ATXN2-201ENST00000377617 KIF4AO95239 1232 aa19.22■□□□□ 0.67
ATXN2-201ENST00000377617 NFE2L2Q16236 605 aa19.22■□□□□ 0.67
ATXN2-201ENST00000377617 CNNM1Q9NRU3 951 aa19.22■□□□□ 0.67
ATXN2-201ENST00000377617 STIM2Q9P246 746 aa19.22■□□□□ 0.67
ATXN2-201ENST00000377617 PTGS1P23219 599 aa19.22■□□□□ 0.67
ATXN2-201ENST00000377617 U2AF2P26368 475 aaKnown RBP eCLIP19.22■□□□□ 0.673e-6■■■□□ 15.8
ATXN2-201ENST00000377617 FKBP4Q02790 459 aaKnown RBP eCLIP19.22■□□□□ 0.67
ATXN2-201ENST00000377617 HDAC1Q13547 482 aaPredicted RBP19.22■□□□□ 0.67
ATXN2-201ENST00000377617 KIAA0753Q2KHM9 967 aa19.22■□□□□ 0.67
ATXN2-201ENST00000377617 SULT6B1Q6IMI4 303 aa19.22■□□□□ 0.67
ATXN2-201ENST00000377617 IGHDP01880 384 aa19.21■□□□□ 0.67
ATXN2-201ENST00000377617 PAF1Q8N7H5 531 aa19.21■□□□□ 0.67
ATXN2-201ENST00000377617 PHACTR2O75167 634 aa19.21■□□□□ 0.67
ATXN2-201ENST00000377617 MAP2K2P36507 400 aa19.21■□□□□ 0.67
ATXN2-201ENST00000377617 CCDC129Q6ZRS4 1044 aa19.21■□□□□ 0.67
ATXN2-201ENST00000377617 INPP5BP32019 993 aa19.21■□□□□ 0.67
ATXN2-201ENST00000377617 EVA1CP58658 441 aa19.21■□□□□ 0.67
ATXN2-201ENST00000377617 LACTBP83111 547 aaPredicted RBP19.21■□□□□ 0.67
ATXN2-201ENST00000377617 CCDC160A6NGH7 325 aa19.2■□□□□ 0.66
ATXN2-201ENST00000377617 VGLL3A8MV65 326 aa19.2■□□□□ 0.66
ATXN2-201ENST00000377617 TYRO3Q06418 890 aa19.2■□□□□ 0.66
ATXN2-201ENST00000377617 DRC1Q96MC2 740 aa19.2■□□□□ 0.66
ATXN2-201ENST00000377617 DACT1Q9NYF0 836 aa19.2■□□□□ 0.66
ATXN2-201ENST00000377617 SMARCA5O60264 1052 aaPredicted RBP19.2■□□□□ 0.66
ATXN2-201ENST00000377617 TMEM132AQ24JP5 1023 aa19.2■□□□□ 0.66
ATXN2-201ENST00000377617 WWC2Q6AWC2 1192 aa19.2■□□□□ 0.66
ATXN2-201ENST00000377617 PPFIBP2Q8ND30 876 aa19.2■□□□□ 0.66
ATXN2-201ENST00000377617 MYCBPQ99417 103 aaPredicted RBP19.2■□□□□ 0.66
ATXN2-201ENST00000377617 NCAPD3P42695 1498 aa19.2■□□□□ 0.66
ATXN2-201ENST00000377617 TACC1O75410 805 aa19.2■□□□□ 0.66
ATXN2-201ENST00000377617 ZFYP08048 801 aaPredicted RBP19.2■□□□□ 0.66
ATXN2-201ENST00000377617 VAV2P52735 878 aa19.2■□□□□ 0.66
ATXN2-201ENST00000377617 ZEB2O60315 1214 aa19.2■□□□□ 0.66
ATXN2-201ENST00000377617 GUCY1B3Q02153 619 aa19.2■□□□□ 0.66
ATXN2-201ENST00000377617 MKRN1Q9UHC7 482 aaKnown RBP19.2■□□□□ 0.66
ATXN2-201ENST00000377617 SYT10Q6XYQ8 523 aa19.19■□□□□ 0.66
ATXN2-201ENST00000377617 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.19■□□□□ 0.664e-6■□□□□ 8.1
ATXN2-201ENST00000377617 RAB34Q9BZG1 259 aa19.19■□□□□ 0.66
ATXN2-201ENST00000377617 NPHP3Q7Z494 1330 aa19.19■□□□□ 0.66
ATXN2-201ENST00000377617 CLNS1AP54105 237 aaKnown RBP19.19■□□□□ 0.66
ATXN2-201ENST00000377617 FMNL3Q8IVF7 1028 aa19.19■□□□□ 0.66
ATXN2-201ENST00000377617 NOP2P46087 812 aaKnown RBP19.19■□□□□ 0.66
ATXN2-201ENST00000377617 PSME1Q06323 249 aa19.19■□□□□ 0.66
ATXN2-201ENST00000377617 TTC22Q5TAA0 569 aa19.19■□□□□ 0.66
ATXN2-201ENST00000377617 CCDC77Q9BR77 488 aa19.19■□□□□ 0.66
ATXN2-201ENST00000377617 SAMD1Q6SPF0 538 aaPredicted RBP19.19■□□□□ 0.66
ATXN2-201ENST00000377617 DNAJC25Q9H1X3 360 aa19.19■□□□□ 0.66
ATXN2-201ENST00000377617 HOMER2Q9NSB8 354 aa19.19■□□□□ 0.66
ATXN2-201ENST00000377617 SWAP70Q9UH65 585 aa19.19■□□□□ 0.66
ATXN2-201ENST00000377617 TRIM27P14373 513 aa19.18■□□□□ 0.66
ATXN2-201ENST00000377617 EVCP57679 992 aa19.18■□□□□ 0.66
ATXN2-201ENST00000377617 TUBB2AQ13885 445 aa19.18■□□□□ 0.66
ATXN2-201ENST00000377617 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.18■□□□□ 0.66
ATXN2-201ENST00000377617 TUBB2BQ9BVA1 445 aa19.18■□□□□ 0.66
ATXN2-201ENST00000377617 RIOK3O14730 519 aaKnown RBP19.18■□□□□ 0.66
ATXN2-201ENST00000377617 KRT86O43790 486 aa19.18■□□□□ 0.66
ATXN2-201ENST00000377617 LMNTD2Q8IXW0 634 aa19.18■□□□□ 0.66
ATXN2-201ENST00000377617 KCNG4Q8TDN1 519 aa19.18■□□□□ 0.66
ATXN2-201ENST00000377617 CTNNBL1Q8WYA6 563 aaPredicted RBP19.18■□□□□ 0.66
ATXN2-201ENST00000377617 NCOA2Q15596 1464 aa19.18■□□□□ 0.66
ATXN2-201ENST00000377617 KRT83P78385 493 aa19.18■□□□□ 0.66
ATXN2-201ENST00000377617 HMG20BQ9P0W2 317 aa19.18■□□□□ 0.66
ATXN2-201ENST00000377617 CNPY2Q9Y2B0 182 aa19.18■□□□□ 0.66
ATXN2-201ENST00000377617 ZNF644Q9H582 1327 aaPredicted RBP19.18■□□□□ 0.66
ATXN2-201ENST00000377617 ARHGAP25P42331 645 aa19.17■□□□□ 0.66
ATXN2-201ENST00000377617 NLRP6P59044 892 aa19.17■□□□□ 0.66
ATXN2-201ENST00000377617 PLVAPQ9BX97 442 aa19.17■□□□□ 0.66
ATXN2-201ENST00000377617 LUC7L2Q9Y383 392 aaKnown RBP19.17■□□□□ 0.66
ATXN2-201ENST00000377617 SYKP43405 635 aa19.17■□□□□ 0.66
ATXN2-201ENST00000377617 AFAP1L1Q8TED9 768 aa19.17■□□□□ 0.66
ATXN2-201ENST00000377617 SELENOOQ9BVL4 669 aa19.17■□□□□ 0.66
ATXN2-201ENST00000377617 MRPS27Q92552 414 aaKnown RBP19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms