RNA–Protein interactions for RNA: ENST00000377080.7

USP11-203, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 804 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-203ENST00000377080 TERF1P54274 439 aa12.22□□□□□ -0.45
USP11-203ENST00000377080 SLC4A10Q6U841 1118 aa12.22□□□□□ -0.45
USP11-203ENST00000377080 FAM196AQ6ZSG2 479 aa12.22□□□□□ -0.45
USP11-203ENST00000377080 KCNH5Q8NCM2 988 aa12.22□□□□□ -0.45
USP11-203ENST00000377080 SPATA31A5Q5VU36 1347 aa12.21□□□□□ -0.45
USP11-203ENST00000377080 SPATA31A7Q8IWB4 1347 aa12.21□□□□□ -0.45
USP11-203ENST00000377080 F6X3S4 739 aa12.21□□□□□ -0.45
USP11-203ENST00000377080 BRD1O95696 1058 aa12.21□□□□□ -0.45
USP11-203ENST00000377080 UBTFL1P0CB47 393 aaPredicted RBP12.21□□□□□ -0.45
USP11-203ENST00000377080 HSPA4P34932 840 aa12.21□□□□□ -0.45
USP11-203ENST00000377080 NASPP49321 788 aaPredicted RBP12.21□□□□□ -0.45
USP11-203ENST00000377080 MTX1Q13505 466 aa12.21□□□□□ -0.45
USP11-203ENST00000377080 TMX3Q96JJ7 454 aa12.21□□□□□ -0.45
USP11-203ENST00000377080 MIS18AQ9NYP9 233 aa12.21□□□□□ -0.45
USP11-203ENST00000377080 ZDHHC9Q9Y397 364 aa12.21□□□□□ -0.45
USP11-203ENST00000377080 AK9Q5TCS8 1911 aa12.21□□□□□ -0.46
USP11-203ENST00000377080 LTN1O94822 1766 aa12.2□□□□□ -0.46
USP11-203ENST00000377080 TTC41PQ6P2S7 1318 aa12.2□□□□□ -0.46
USP11-203ENST00000377080 MCM5P33992 734 aa12.2□□□□□ -0.46
USP11-203ENST00000377080 NEK4P51957 841 aa12.2□□□□□ -0.46
USP11-203ENST00000377080 KIF1BPQ96EK5 621 aa12.2□□□□□ -0.46
USP11-203ENST00000377080 PLEKHG2Q9H7P9 1386 aa12.19□□□□□ -0.46
USP11-203ENST00000377080 PNMA6EA0A0J9YXQ4 647 aa12.19□□□□□ -0.46
USP11-203ENST00000377080 ALDH1L1O75891 902 aa12.19□□□□□ -0.46
USP11-203ENST00000377080 ZSCAN23Q3MJ62 389 aa12.19□□□□□ -0.46
USP11-203ENST00000377080 AMOTQ4VCS5 1084 aa12.19□□□□□ -0.46
USP11-203ENST00000377080 MCTP1Q6DN14 999 aa12.19□□□□□ -0.46
USP11-203ENST00000377080 PDLIM2Q96JY6 352 aa12.19□□□□□ -0.46
USP11-203ENST00000377080 EXOC6BQ9Y2D4 811 aa12.19□□□□□ -0.46
USP11-203ENST00000377080 NFAT5O94916 1531 aa12.19□□□□□ -0.46
USP11-203ENST00000377080 EIF4A1P60842 406 aaKnown RBP12.18□□□□□ -0.46
USP11-203ENST00000377080 HDGFL1Q5TGJ6 251 aa12.18□□□□□ -0.46
USP11-203ENST00000377080 ZSCAN30Q86W11 494 aa12.18□□□□□ -0.46
USP11-203ENST00000377080 ABTB2Q8N961 1025 aa12.18□□□□□ -0.46
USP11-203ENST00000377080 SYAP1Q96A49 352 aaPredicted RBP12.18□□□□□ -0.46
USP11-203ENST00000377080 FOXD4L1Q9NU39 408 aa12.18□□□□□ -0.46
USP11-203ENST00000377080 LRRFIP2Q9Y608 721 aaKnown RBP12.18□□□□□ -0.46
USP11-203ENST00000377080 WDR33Q9C0J8 1336 aaKnown RBP12.17□□□□□ -0.46
USP11-203ENST00000377080 AKAP4Q5JQC9 854 aa12.17□□□□□ -0.46
USP11-203ENST00000377080 LRSAM1Q6UWE0 723 aa12.17□□□□□ -0.46
USP11-203ENST00000377080 ERC1Q8IUD2 1116 aa12.17□□□□□ -0.46
USP11-203ENST00000377080 TMEM87AQ8NBN3 555 aa12.17□□□□□ -0.46
USP11-203ENST00000377080 KCNB2Q92953 911 aa12.17□□□□□ -0.46
USP11-203ENST00000377080 HEG1Q9ULI3 1381 aa12.17□□□□□ -0.46
USP11-203ENST00000377080 ADAMTS7Q9UKP4 1686 aa12.16□□□□□ -0.46
USP11-203ENST00000377080 CASZ1Q86V15 1759 aa12.16□□□□□ -0.46
USP11-203ENST00000377080 SGSM2O43147 1006 aa12.16□□□□□ -0.46
USP11-203ENST00000377080 PRPF40AO75400 957 aaKnown RBP12.16□□□□□ -0.46
USP11-203ENST00000377080 PHF14O94880 888 aa12.16□□□□□ -0.46
USP11-203ENST00000377080 PLEKHO1Q53GL0 409 aaPredicted RBP12.16□□□□□ -0.46
USP11-203ENST00000377080 BEND3Q5T5X7 828 aa12.16□□□□□ -0.46
USP11-203ENST00000377080 PPP1R42Q7Z4L9 355 aa12.16□□□□□ -0.46
USP11-203ENST00000377080 CNTROBQ8N137 903 aa12.16□□□□□ -0.46
USP11-203ENST00000377080 ZGPATQ8N5A5 531 aaKnown RBP12.16□□□□□ -0.46
USP11-203ENST00000377080 PI4K2BQ8TCG2 481 aa12.16□□□□□ -0.46
USP11-203ENST00000377080 RHPN1Q8TCX5 695 aa12.16□□□□□ -0.46
USP11-203ENST00000377080 RUFY2Q8WXA3 655 aa12.16□□□□□ -0.46
USP11-203ENST00000377080 TM6SF1Q9BZW5 370 aa12.16□□□□□ -0.46
USP11-203ENST00000377080 RAD50Q92878 1312 aa12.15□□□□□ -0.46
USP11-203ENST00000377080 APBB1O00213 710 aa12.15□□□□□ -0.46
USP11-203ENST00000377080 GLRX3O76003 335 aaKnown RBP12.15□□□□□ -0.46
USP11-203ENST00000377080 LETM1O95202 739 aaPredicted RBP12.15□□□□□ -0.46
USP11-203ENST00000377080 TPM2P07951 284 aa12.15□□□□□ -0.46
USP11-203ENST00000377080 UVSSAQ2YD98 709 aa12.15□□□□□ -0.46
USP11-203ENST00000377080 GPT2Q8TD30 523 aa12.15□□□□□ -0.46
USP11-203ENST00000377080 DNAAF4Q8WXU2 420 aa12.15□□□□□ -0.46
USP11-203ENST00000377080 DBF4Q9UBU7 674 aaPredicted RBP12.15□□□□□ -0.46
USP11-203ENST00000377080 UTYO14607 1347 aa12.14□□□□□ -0.47
USP11-203ENST00000377080 SPATA31A1Q5TZJ5 1347 aa12.14□□□□□ -0.47
USP11-203ENST00000377080 TRIM6-TRIM34B2RNG4 842 aa12.14□□□□□ -0.47
USP11-203ENST00000377080 SURF6O75683 361 aaKnown RBP12.14□□□□□ -0.47
USP11-203ENST00000377080 CAVIN1Q6NZI2 390 aaKnown RBP12.14□□□□□ -0.47
USP11-203ENST00000377080 TICAM2Q86XR7 235 aa12.14□□□□□ -0.47
USP11-203ENST00000377080 FAM184AQ8NB25 1140 aa12.14□□□□□ -0.47
USP11-203ENST00000377080 ZSCAN31Q96LW9 406 aaPredicted RBP12.14□□□□□ -0.47
USP11-203ENST00000377080 ANO2Q9NQ90 1003 aa12.14□□□□□ -0.47
USP11-203ENST00000377080 PRDM11Q9NQV5 511 aa12.14□□□□□ -0.47
USP11-203ENST00000377080 SNRKQ9NRH2 765 aa12.14□□□□□ -0.47
USP11-203ENST00000377080 NOL7Q9UMY1 257 aaKnown RBP12.14□□□□□ -0.47
USP11-203ENST00000377080 ATP6V1DQ9Y5K8 247 aa12.14□□□□□ -0.47
USP11-203ENST00000377080 SLIT3O75094 1523 aa12.14□□□□□ -0.47
USP11-203ENST00000377080 SIPA1L3O60292 1781 aaPredicted RBP12.13□□□□□ -0.47
USP11-203ENST00000377080 HIP1O00291 1037 aa12.13□□□□□ -0.47
USP11-203ENST00000377080 ZNF500O60304 480 aaPredicted RBP12.13□□□□□ -0.47
USP11-203ENST00000377080 NCLP19338 710 aaKnown RBP12.13□□□□□ -0.47
USP11-203ENST00000377080 PKP1Q13835 747 aa12.13□□□□□ -0.47
USP11-203ENST00000377080 KIAA1211Q6ZU35 1233 aa12.13□□□□□ -0.47
USP11-203ENST00000377080 RILPL2Q969X0 211 aa12.13□□□□□ -0.47
USP11-203ENST00000377080 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.13□□□□□ -0.47
USP11-203ENST00000377080 ABCC6O95255 1503 aa12.12□□□□□ -0.47
USP11-203ENST00000377080 GIGYF1O75420 1035 aaPredicted RBP12.12□□□□□ -0.47
USP11-203ENST00000377080 OFD1O75665 1012 aa12.12□□□□□ -0.47
USP11-203ENST00000377080 CSPP1Q1MSJ5 1256 aa12.12□□□□□ -0.47
USP11-203ENST00000377080 NUTM2GQ5VZR2 741 aa12.12□□□□□ -0.47
USP11-203ENST00000377080 KSR2Q6VAB6 950 aa12.12□□□□□ -0.47
USP11-203ENST00000377080 GPATCH3Q96I76 525 aa12.12□□□□□ -0.47
USP11-203ENST00000377080 TTC14Q96N46 770 aa12.12□□□□□ -0.47
USP11-203ENST00000377080 LSG1Q9H089 658 aaKnown RBP12.12□□□□□ -0.47
USP11-203ENST00000377080 RBSNQ9H1K0 784 aa12.12□□□□□ -0.47
USP11-203ENST00000377080 ALDH8A1Q9H2A2 487 aaPredicted RBP12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms