RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 DCTN1Q14203 1278 aa19.49■□□□□ 0.71
HDAC6-204ENST00000376643 RRAGCQ9HB90 399 aa19.49■□□□□ 0.71
HDAC6-204ENST00000376643 CEP350Q5VT06 3117 aa19.48■□□□□ 0.71
HDAC6-204ENST00000376643 SRGNP10124 158 aa19.48■□□□□ 0.71
HDAC6-204ENST00000376643 NFE2L2Q16236 605 aa19.48■□□□□ 0.71
HDAC6-204ENST00000376643 TAOK3Q9H2K8 898 aa19.48■□□□□ 0.71
HDAC6-204ENST00000376643 NFKBIEO00221 500 aa19.47■□□□□ 0.71
HDAC6-204ENST00000376643 C21orf2O43822 256 aa19.47■□□□□ 0.71
HDAC6-204ENST00000376643 RALBP1Q15311 655 aa19.47■□□□□ 0.71
HDAC6-204ENST00000376643 NIP7Q9Y221 180 aaKnown RBP eCLIP19.47■□□□□ 0.71
HDAC6-204ENST00000376643 NPR1P16066 1061 aa19.46■□□□□ 0.71
HDAC6-204ENST00000376643 ANKRD31Q8N7Z5 1873 aa19.45■□□□□ 0.7
HDAC6-204ENST00000376643 GTF2E1P29083 439 aaPredicted RBP19.45■□□□□ 0.7
HDAC6-204ENST00000376643 LMOD3Q0VAK6 560 aa19.45■□□□□ 0.7
HDAC6-204ENST00000376643 ERFEQ4G0M1 354 aa19.45■□□□□ 0.7
HDAC6-204ENST00000376643 PRPF40BQ6NWY9 871 aaKnown RBP19.45■□□□□ 0.7
HDAC6-204ENST00000376643 KIF6Q6ZMV9 814 aa19.45■□□□□ 0.7
HDAC6-204ENST00000376643 PLEKHF1Q96S99 279 aa19.45■□□□□ 0.7
HDAC6-204ENST00000376643 NYXQ9GZU5 481 aa19.45■□□□□ 0.7
HDAC6-204ENST00000376643 ERBB4Q15303 1308 aa19.45■□□□□ 0.7
HDAC6-204ENST00000376643 PRAMEF22A3QJZ6 481 aa19.44■□□□□ 0.7
HDAC6-204ENST00000376643 ERVV-1B6SEH8 477 aa19.44■□□□□ 0.7
HDAC6-204ENST00000376643 LAMB4A4D0S4 1761 aa19.44■□□□□ 0.7
HDAC6-204ENST00000376643 NBPF26B4DH59 902 aa19.43■□□□□ 0.7
HDAC6-204ENST00000376643 PIP4K2AP48426 406 aaPredicted RBP19.43■□□□□ 0.7
HDAC6-204ENST00000376643 CCDC93Q567U6 631 aa19.43■□□□□ 0.7
HDAC6-204ENST00000376643 NBPF10Q6P3W6 841 aaKnown RBP19.43■□□□□ 0.7
HDAC6-204ENST00000376643 CCDC24Q8N4L8 307 aa19.43■□□□□ 0.7
HDAC6-204ENST00000376643 NBPF15Q8N660 670 aa19.43■□□□□ 0.7
HDAC6-204ENST00000376643 TIAM2Q8IVF5 1701 aa19.42■□□□□ 0.7
HDAC6-204ENST00000376643 ALDH1B1P30837 517 aa19.42■□□□□ 0.7
HDAC6-204ENST00000376643 BABAM1Q9NWV8 329 aa19.42■□□□□ 0.7
HDAC6-204ENST00000376643 ZNF219Q9P2Y4 722 aaPredicted RBP19.42■□□□□ 0.7
HDAC6-204ENST00000376643 COL11A2P13942 1736 aaPredicted RBP19.42■□□□□ 0.7
HDAC6-204ENST00000376643 KLRG2A4D1S0 409 aaPredicted RBP19.41■□□□□ 0.7
HDAC6-204ENST00000376643 EIF4A1P60842 406 aaKnown RBP19.41■□□□□ 0.7
HDAC6-204ENST00000376643 ARFGEF2Q9Y6D5 1785 aa19.4■□□□□ 0.7
HDAC6-204ENST00000376643 RTKN2Q8IZC4 609 aa19.4■□□□□ 0.7
HDAC6-204ENST00000376643 MIS18AQ9NYP9 233 aa19.4■□□□□ 0.7
HDAC6-204ENST00000376643 MAP3K15Q6ZN16 1313 aa19.4■□□□□ 0.7
HDAC6-204ENST00000376643 IBTKQ9P2D0 1353 aaPredicted RBP19.4■□□□□ 0.7
HDAC6-204ENST00000376643 WDR90Q96KV7 1748 aa19.39■□□□□ 0.7
HDAC6-204ENST00000376643 KDM3BQ7LBC6 1761 aa19.39■□□□□ 0.7
HDAC6-204ENST00000376643 FER1L6Q2WGJ9 1857 aa19.39■□□□□ 0.7
HDAC6-204ENST00000376643 IFFO2Q5TF58 517 aa19.39■□□□□ 0.69
HDAC6-204ENST00000376643 DNAJC5GQ8N7S2 189 aa19.39■□□□□ 0.69
HDAC6-204ENST00000376643 TSPYL4Q9UJ04 414 aa19.39■□□□□ 0.69
HDAC6-204ENST00000376643 IQCA1LA6NCM1 817 aa19.38■□□□□ 0.69
HDAC6-204ENST00000376643 PRELPP51888 382 aa19.38■□□□□ 0.69
HDAC6-204ENST00000376643 GRIPAP1Q4V328 841 aa19.38■□□□□ 0.69
HDAC6-204ENST00000376643 KLRG1Q96E93 195 aa19.38■□□□□ 0.69
HDAC6-204ENST00000376643 FKBP4Q02790 459 aaKnown RBP eCLIP19.37■□□□□ 0.69
HDAC6-204ENST00000376643 CC2D2BQ6DHV5 1058 aa19.37■□□□□ 0.69
HDAC6-204ENST00000376643 RRP7AQ9Y3A4 280 aaKnown RBP19.37■□□□□ 0.69
HDAC6-204ENST00000376643 DLG5Q8TDM6 1919 aa19.37■□□□□ 0.69
HDAC6-204ENST00000376643 DICER1Q9UPY3 1922 aaKnown RBP19.36■□□□□ 0.69
HDAC6-204ENST00000376643 RIPK4P57078 832 aa19.36■□□□□ 0.69
HDAC6-204ENST00000376643 HLFQ16534 295 aa19.36■□□□□ 0.69
HDAC6-204ENST00000376643 NGEFQ8N5V2 710 aa19.36■□□□□ 0.69
HDAC6-204ENST00000376643 RIC1Q4ADV7 1423 aa19.35■□□□□ 0.69
HDAC6-204ENST00000376643 MYBBP1AQ9BQG0 1328 aaKnown RBP19.35■□□□□ 0.69
HDAC6-204ENST00000376643 FAM177BA6PVY3 158 aa19.35■□□□□ 0.69
HDAC6-204ENST00000376643 PARP10Q53GL7 1025 aa19.35■□□□□ 0.69
HDAC6-204ENST00000376643 C7orf43Q8WVR3 580 aa19.35■□□□□ 0.69
HDAC6-204ENST00000376643 RPGRQ92834 1020 aaKnown RBP19.35■□□□□ 0.69
HDAC6-204ENST00000376643 CCDC88AQ3V6T2 1871 aa19.35■□□□□ 0.69
HDAC6-204ENST00000376643 SLX4Q8IY92 1834 aa19.35■□□□□ 0.69
HDAC6-204ENST00000376643 MYL6BP14649 208 aa19.34■□□□□ 0.69
HDAC6-204ENST00000376643 CRY2Q49AN0 593 aa19.34■□□□□ 0.69
HDAC6-204ENST00000376643 PPP1R42Q7Z4L9 355 aa19.34■□□□□ 0.69
HDAC6-204ENST00000376643 THUMPD2Q9BTF0 503 aaKnown RBP19.34■□□□□ 0.69
HDAC6-204ENST00000376643 TMX4Q9H1E5 349 aaPredicted RBP19.34■□□□□ 0.69
HDAC6-204ENST00000376643 GIGYF2Q6Y7W6 1299 aaKnown RBP19.33■□□□□ 0.68
HDAC6-204ENST00000376643 JMYQ8N9B5 988 aa19.33■□□□□ 0.68
HDAC6-204ENST00000376643 RNF123Q5XPI4 1314 aa19.32■□□□□ 0.68
HDAC6-204ENST00000376643 WDR43Q15061 677 aaKnown RBP eCLIP19.32■□□□□ 0.68
HDAC6-204ENST00000376643 L3MBTL3Q96JM7 780 aaPredicted RBP19.32■□□□□ 0.68
HDAC6-204ENST00000376643 TMPOP42166 694 aaKnown RBP19.31■□□□□ 0.68
HDAC6-204ENST00000376643 HSP90AB3PQ58FF7 597 aa19.31■□□□□ 0.68
HDAC6-204ENST00000376643 CHADLQ6NUI6 762 aa19.31■□□□□ 0.68
HDAC6-204ENST00000376643 RBM17Q96I25 401 aaKnown RBP19.31■□□□□ 0.68
HDAC6-204ENST00000376643 PSMD1Q99460 953 aa19.31■□□□□ 0.68
HDAC6-204ENST00000376643 ZBTB3Q9H5J0 574 aa19.31■□□□□ 0.68
HDAC6-204ENST00000376643 CACNA1SQ13698 1873 aa19.31■□□□□ 0.68
HDAC6-204ENST00000376643 TTLL7Q6ZT98 887 aa19.3■□□□□ 0.68
HDAC6-204ENST00000376643 JDP2Q8WYK2 163 aa19.3■□□□□ 0.68
HDAC6-204ENST00000376643 POTECB2RU33 542 aa19.29■□□□□ 0.68
HDAC6-204ENST00000376643 DDNO94850 711 aaPredicted RBP19.29■□□□□ 0.68
HDAC6-204ENST00000376643 GPTP24298 496 aa19.29■□□□□ 0.68
HDAC6-204ENST00000376643 HOXA10P31260 410 aaPredicted RBP19.29■□□□□ 0.68
HDAC6-204ENST00000376643 IARSP41252 1262 aaKnown RBP19.29■□□□□ 0.68
HDAC6-204ENST00000376643 LDHDQ86WU2 507 aa19.29■□□□□ 0.68
HDAC6-204ENST00000376643 NUTM1Q86Y26 1132 aa19.29■□□□□ 0.68
HDAC6-204ENST00000376643 ZNF34Q8IZ26 560 aa19.29■□□□□ 0.68
HDAC6-204ENST00000376643 ABCC12Q96J65 1359 aa19.29■□□□□ 0.68
HDAC6-204ENST00000376643 EIF2S2P20042 333 aaKnown RBP19.28■□□□□ 0.68
HDAC6-204ENST00000376643 RUNDC1Q96C34 613 aa19.28■□□□□ 0.68
HDAC6-204ENST00000376643 NLRP3Q96P20 1036 aa19.28■□□□□ 0.68
HDAC6-204ENST00000376643 CRAMP1Q96RY5 1269 aa19.28■□□□□ 0.68
HDAC6-204ENST00000376643 ZNF277Q9NRM2 450 aaPredicted RBP19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 164.5 ms