RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 C5P01031 1676 aa12.89□□□□□ -0.35
ABCF1-202ENST00000376545 RUFY3Q7L099 469 aa12.88□□□□□ -0.35
ABCF1-202ENST00000376545 LRRC59Q96AG4 307 aaKnown RBP12.88□□□□□ -0.35
ABCF1-202ENST00000376545 OFD1O75665 1012 aa12.88□□□□□ -0.35
ABCF1-202ENST00000376545 AK2P54819 239 aa12.88□□□□□ -0.35
ABCF1-202ENST00000376545 TM6SF1Q9BZW5 370 aa12.88□□□□□ -0.35
ABCF1-202ENST00000376545 LIMCH1Q9UPQ0 1083 aa12.88□□□□□ -0.35
ABCF1-202ENST00000376545 MPRIPQ6WCQ1 1025 aa12.88□□□□□ -0.35
ABCF1-202ENST00000376545 ANKLE2Q86XL3 938 aa12.88□□□□□ -0.35
ABCF1-202ENST00000376545 HDAC5Q9UQL6 1122 aa12.88□□□□□ -0.35
ABCF1-202ENST00000376545 MAP3K2Q9Y2U5 619 aa12.88□□□□□ -0.35
ABCF1-202ENST00000376545 ABCC6O95255 1503 aa12.87□□□□□ -0.35
ABCF1-202ENST00000376545 TERF1P54274 439 aa12.87□□□□□ -0.35
ABCF1-202ENST00000376545 PSME1Q06323 249 aa12.87□□□□□ -0.35
ABCF1-202ENST00000376545 FOXD4L5Q5VV16 416 aaPredicted RBP12.87□□□□□ -0.35
ABCF1-202ENST00000376545 USP48Q86UV5 1035 aa12.87□□□□□ -0.35
ABCF1-202ENST00000376545 ERC1Q8IUD2 1116 aa12.87□□□□□ -0.35
ABCF1-202ENST00000376545 FOXD4L4Q8WXT5 416 aaPredicted RBP12.87□□□□□ -0.35
ABCF1-202ENST00000376545 KIF1AQ12756 1690 aa12.87□□□□□ -0.35
ABCF1-202ENST00000376545 ALS2Q96Q42 1657 aa12.87□□□□□ -0.35
ABCF1-202ENST00000376545 GCP02774 474 aa12.87□□□□□ -0.35
ABCF1-202ENST00000376545 C14orf37Q86TY3 774 aa12.87□□□□□ -0.35
ABCF1-202ENST00000376545 KAZALD1Q96I82 304 aa12.87□□□□□ -0.35
ABCF1-202ENST00000376545 ECHDC1Q9NTX5 307 aa12.87□□□□□ -0.35
ABCF1-202ENST00000376545 HYPKQ9NX55 129 aa12.87□□□□□ -0.35
ABCF1-202ENST00000376545 GADD45BO75293 160 aaPredicted RBP12.86□□□□□ -0.35
ABCF1-202ENST00000376545 ANXA1P04083 346 aa12.86□□□□□ -0.35
ABCF1-202ENST00000376545 MCM5P33992 734 aa12.86□□□□□ -0.35
ABCF1-202ENST00000376545 PROSER3Q2NL68 480 aa12.86□□□□□ -0.35
ABCF1-202ENST00000376545 NOL8Q76FK4 1167 aaKnown RBP12.86□□□□□ -0.35
ABCF1-202ENST00000376545 CLASRPQ8N2M8 674 aaKnown RBP12.86□□□□□ -0.35
ABCF1-202ENST00000376545 SYAP1Q96A49 352 aaPredicted RBP12.86□□□□□ -0.35
ABCF1-202ENST00000376545 ZSWIM6Q9HCJ5 1215 aa12.86□□□□□ -0.35
ABCF1-202ENST00000376545 ZSCAN22P10073 491 aaPredicted RBP12.86□□□□□ -0.35
ABCF1-202ENST00000376545 NECTIN1Q15223 517 aa12.86□□□□□ -0.35
ABCF1-202ENST00000376545 ESCO1Q5FWF5 840 aa12.86□□□□□ -0.35
ABCF1-202ENST00000376545 VPS53Q5VIR6 699 aa12.86□□□□□ -0.35
ABCF1-202ENST00000376545 CWC27Q6UX04 472 aaKnown RBP12.86□□□□□ -0.35
ABCF1-202ENST00000376545 RUFY2Q8WXA3 655 aa12.86□□□□□ -0.35
ABCF1-202ENST00000376545 PDIA6Q15084 440 aa12.86□□□□□ -0.35
ABCF1-202ENST00000376545 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.86□□□□□ -0.35
ABCF1-202ENST00000376545 TPM2P07951 284 aa12.85□□□□□ -0.35
ABCF1-202ENST00000376545 PTH1RQ03431 593 aa12.85□□□□□ -0.35
ABCF1-202ENST00000376545 LINS1Q8NG48 757 aa12.85□□□□□ -0.35
ABCF1-202ENST00000376545 EVI5LQ96CN4 794 aa12.85□□□□□ -0.35
ABCF1-202ENST00000376545 JCADQ9P266 1359 aa12.85□□□□□ -0.35
ABCF1-202ENST00000376545 MSNP26038 577 aaKnown RBP12.85□□□□□ -0.35
ABCF1-202ENST00000376545 KIAA1211Q6ZU35 1233 aa12.85□□□□□ -0.35
ABCF1-202ENST00000376545 TSPY26PQ9H489 355 aa12.85□□□□□ -0.35
ABCF1-202ENST00000376545 SPG7Q9UQ90 795 aa12.85□□□□□ -0.35
ABCF1-202ENST00000376545 SYT1P21579 422 aa12.84□□□□□ -0.35
ABCF1-202ENST00000376545 C1orf141Q5JVX7 400 aa12.84□□□□□ -0.35
ABCF1-202ENST00000376545 ZKSCAN5Q9Y2L8 839 aa12.84□□□□□ -0.35
ABCF1-202ENST00000376545 STX6O43752 255 aa12.84□□□□□ -0.35
ABCF1-202ENST00000376545 PHF14O94880 888 aa12.84□□□□□ -0.35
ABCF1-202ENST00000376545 SASH1O94885 1247 aa12.84□□□□□ -0.35
ABCF1-202ENST00000376545 ANKRD24Q8TF21 1146 aa12.84□□□□□ -0.35
ABCF1-202ENST00000376545 DDX21Q9NR30 783 aaKnown RBP eCLIP12.84□□□□□ -0.35
ABCF1-202ENST00000376545 UVSSAQ2YD98 709 aa12.84□□□□□ -0.35
ABCF1-202ENST00000376545 ZSCAN31Q96LW9 406 aaPredicted RBP12.84□□□□□ -0.35
ABCF1-202ENST00000376545 C9orf78Q9NZ63 289 aaPredicted RBP12.84□□□□□ -0.35
ABCF1-202ENST00000376545 COL18A1P39060 1754 aa12.83□□□□□ -0.35
ABCF1-202ENST00000376545 PLEKHG2Q9H7P9 1386 aa12.83□□□□□ -0.36
ABCF1-202ENST00000376545 GRM8O00222 908 aa12.83□□□□□ -0.36
ABCF1-202ENST00000376545 CWF19L2Q2TBE0 894 aaKnown RBP12.83□□□□□ -0.36
ABCF1-202ENST00000376545 GPATCH3Q96I76 525 aa12.83□□□□□ -0.36
ABCF1-202ENST00000376545 SUCLG2Q96I99 432 aa12.83□□□□□ -0.36
ABCF1-202ENST00000376545 ALDH8A1Q9H2A2 487 aaPredicted RBP12.83□□□□□ -0.36
ABCF1-202ENST00000376545 DIAPH3Q9NSV4 1193 aa12.83□□□□□ -0.36
ABCF1-202ENST00000376545 PRAMEF22A3QJZ6 481 aa12.83□□□□□ -0.36
ABCF1-202ENST00000376545 LARGE1O95461 756 aa12.83□□□□□ -0.36
ABCF1-202ENST00000376545 F13A1P00488 732 aa12.83□□□□□ -0.36
ABCF1-202ENST00000376545 CASTP20810 708 aaKnown RBP12.83□□□□□ -0.36
ABCF1-202ENST00000376545 ADCK5Q3MIX3 580 aa12.83□□□□□ -0.36
ABCF1-202ENST00000376545 MAP4K1Q92918 833 aa12.83□□□□□ -0.36
ABCF1-202ENST00000376545 SH2B1Q9NRF2 756 aaPredicted RBP12.83□□□□□ -0.36
ABCF1-202ENST00000376545 PA2G4Q9UQ80 394 aaKnown RBP12.83□□□□□ -0.36
ABCF1-202ENST00000376545 AXIN2Q9Y2T1 843 aa12.83□□□□□ -0.36
ABCF1-202ENST00000376545 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.83□□□□□ -0.36
ABCF1-202ENST00000376545 CCDC171Q6TFL3 1326 aa12.83□□□□□ -0.36
ABCF1-202ENST00000376545 ST3GAL1Q11201 340 aa12.82□□□□□ -0.36
ABCF1-202ENST00000376545 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.82□□□□□ -0.36
ABCF1-202ENST00000376545 FAM184AQ8NB25 1140 aa12.82□□□□□ -0.36
ABCF1-202ENST00000376545 CCDC39Q9UFE4 941 aa12.82□□□□□ -0.36
ABCF1-202ENST00000376545 HIP1O00291 1037 aa12.82□□□□□ -0.36
ABCF1-202ENST00000376545 LETM1O95202 739 aaPredicted RBP12.82□□□□□ -0.36
ABCF1-202ENST00000376545 UBE2HP62256 183 aa12.82□□□□□ -0.36
ABCF1-202ENST00000376545 GDPD2Q9HCC8 539 aa12.82□□□□□ -0.36
ABCF1-202ENST00000376545 NPHP4O75161 1426 aaPredicted RBP12.82□□□□□ -0.36
ABCF1-202ENST00000376545 IFIT2P09913 472 aaKnown RBP12.82□□□□□ -0.36
ABCF1-202ENST00000376545 OS9Q13438 667 aaPredicted RBP12.82□□□□□ -0.36
ABCF1-202ENST00000376545 CCDC183Q5T5S1 534 aa12.82□□□□□ -0.36
ABCF1-202ENST00000376545 CNPY2Q9Y2B0 182 aa12.82□□□□□ -0.36
ABCF1-202ENST00000376545 COL15A1P39059 1388 aa12.81□□□□□ -0.36
ABCF1-202ENST00000376545 IGKV5-2P06315 115 aa12.81□□□□□ -0.36
ABCF1-202ENST00000376545 EAF2Q96CJ1 260 aaPredicted RBP12.81□□□□□ -0.36
ABCF1-202ENST00000376545 RBM33Q96EV2 1170 aaKnown RBP12.81□□□□□ -0.36
ABCF1-202ENST00000376545 ORAI2Q96SN7 254 aa12.81□□□□□ -0.36
ABCF1-202ENST00000376545 BICC1Q9H694 974 aaKnown RBP12.81□□□□□ -0.36
ABCF1-202ENST00000376545 PDRG1Q9NUG6 133 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms