RNA–Protein interactions for RNA: ENST00000375894.9

CTSL-204, Transcript of cathepsin L, humanhuman

TSL 3

Gene CTSL, Length 975 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL-204ENST00000375894 NUP98P52948 1817 aa18.35■□□□□ 0.53
CTSL-204ENST00000375894 DLG5Q8TDM6 1919 aa18.34■□□□□ 0.53
CTSL-204ENST00000375894 DDNO94850 711 aaPredicted RBP18.34■□□□□ 0.53
CTSL-204ENST00000375894 CNKSR1Q969H4 720 aa18.34■□□□□ 0.53
CTSL-204ENST00000375894 MKRN1Q9UHC7 482 aaKnown RBP18.34■□□□□ 0.53
CTSL-204ENST00000375894 CAMTA2O94983 1202 aa18.33■□□□□ 0.52
CTSL-204ENST00000375894 POTEIP0CG38 1075 aa18.33■□□□□ 0.52
CTSL-204ENST00000375894 POTEJP0CG39 1038 aa18.33■□□□□ 0.52
CTSL-204ENST00000375894 STYK1Q6J9G0 422 aa18.33■□□□□ 0.52
CTSL-204ENST00000375894 LAMB4A4D0S4 1761 aa18.32■□□□□ 0.52
CTSL-204ENST00000375894 SRGNP10124 158 aa18.32■□□□□ 0.52
CTSL-204ENST00000375894 PIP4K2AP48426 406 aaPredicted RBP18.32■□□□□ 0.52
CTSL-204ENST00000375894 SOGA3Q5TF21 947 aa18.32■□□□□ 0.52
CTSL-204ENST00000375894 DZIP3Q86Y13 1208 aaKnown RBP18.32■□□□□ 0.52
CTSL-204ENST00000375894 CREBZFQ9NS37 354 aa18.32■□□□□ 0.52
CTSL-204ENST00000375894 BTBD11A6QL63 1104 aa18.31■□□□□ 0.52
CTSL-204ENST00000375894 PER1O15534 1290 aaPredicted RBP18.31■□□□□ 0.52
CTSL-204ENST00000375894 KCNQ3O43525 872 aa18.31■□□□□ 0.52
CTSL-204ENST00000375894 MASTLQ96GX5 879 aa18.31■□□□□ 0.52
CTSL-204ENST00000375894 NBPF5PQ86XG9 351 aaPredicted RBP18.3■□□□□ 0.52
CTSL-204ENST00000375894 CEMIPQ8WUJ3 1361 aa18.3■□□□□ 0.52
CTSL-204ENST00000375894 TRPM7Q96QT4 1865 aa18.29■□□□□ 0.52
CTSL-204ENST00000375894 IQCA1LA6NCM1 817 aa18.29■□□□□ 0.52
CTSL-204ENST00000375894 CCDC93Q567U6 631 aa18.28■□□□□ 0.52
CTSL-204ENST00000375894 PRKAR2BP31323 418 aa18.27■□□□□ 0.52
CTSL-204ENST00000375894 LDHDQ86WU2 507 aa18.27■□□□□ 0.52
CTSL-204ENST00000375894 PHACTR3Q96KR7 559 aa18.27■□□□□ 0.52
CTSL-204ENST00000375894 ZNF652Q9Y2D9 606 aa18.27■□□□□ 0.52
CTSL-204ENST00000375894 USP16Q9Y5T5 823 aa18.27■□□□□ 0.52
CTSL-204ENST00000375894 CNTNAP1P78357 1384 aa18.27■□□□□ 0.51
CTSL-204ENST00000375894 ADAMTSL1Q8N6G6 1762 aa18.27■□□□□ 0.51
CTSL-204ENST00000375894 PRAMEF22A3QJZ6 481 aa18.26■□□□□ 0.51
CTSL-204ENST00000375894 NPR1P16066 1061 aa18.26■□□□□ 0.51
CTSL-204ENST00000375894 EAPPQ56P03 285 aaPredicted RBP18.26■□□□□ 0.51
CTSL-204ENST00000375894 TAF1DQ9H5J8 278 aaPredicted RBP18.26■□□□□ 0.51
CTSL-204ENST00000375894 FAM177BA6PVY3 158 aa18.25■□□□□ 0.51
CTSL-204ENST00000375894 ZNF277Q9NRM2 450 aaPredicted RBP18.25■□□□□ 0.51
CTSL-204ENST00000375894 NPC1L1Q9UHC9 1359 aa18.25■□□□□ 0.51
CTSL-204ENST00000375894 PASKQ96RG2 1323 aa18.24■□□□□ 0.51
CTSL-204ENST00000375894 ZNF541Q9H0D2 1346 aa18.24■□□□□ 0.51
CTSL-204ENST00000375894 FOXN1O15353 648 aa18.24■□□□□ 0.51
CTSL-204ENST00000375894 CLEC4GQ6UXB4 293 aa18.24■□□□□ 0.51
CTSL-204ENST00000375894 L3MBTL3Q96JM7 780 aaPredicted RBP18.24■□□□□ 0.51
CTSL-204ENST00000375894 RSPH6AQ9H0K4 717 aa18.24■□□□□ 0.51
CTSL-204ENST00000375894 NIP7Q9Y221 180 aaKnown RBP eCLIP18.24■□□□□ 0.51
CTSL-204ENST00000375894 CLEC11AQ9Y240 323 aa18.24■□□□□ 0.51
CTSL-204ENST00000375894 KDM3BQ7LBC6 1761 aa18.23■□□□□ 0.51
CTSL-204ENST00000375894 SNRPA1P09661 255 aaKnown RBP18.23■□□□□ 0.51
CTSL-204ENST00000375894 FKBP4Q02790 459 aaKnown RBP eCLIP18.23■□□□□ 0.51
CTSL-204ENST00000375894 OLFM4Q6UX06 510 aa18.23■□□□□ 0.51
CTSL-204ENST00000375894 C7orf43Q8WVR3 580 aa18.23■□□□□ 0.51
CTSL-204ENST00000375894 RTF1Q92541 710 aaKnown RBP18.23■□□□□ 0.51
CTSL-204ENST00000375894 AIDAQ96BJ3 306 aa18.23■□□□□ 0.51
CTSL-204ENST00000375894 CFAP53Q96M91 514 aa18.23■□□□□ 0.51
CTSL-204ENST00000375894 TPTE2Q6XPS3 522 aa18.22■□□□□ 0.51
CTSL-204ENST00000375894 MCM10Q7L590 875 aa18.22■□□□□ 0.51
CTSL-204ENST00000375894 HACL1Q9UJ83 578 aa18.22■□□□□ 0.51
CTSL-204ENST00000375894 TMEM88BA6NKF7 163 aa18.21■□□□□ 0.51
CTSL-204ENST00000375894 VEGFBP49765 207 aa18.21■□□□□ 0.51
CTSL-204ENST00000375894 GTF2E1P29083 439 aaPredicted RBP18.2■□□□□ 0.5
CTSL-204ENST00000375894 RTKN2Q8IZC4 609 aa18.2■□□□□ 0.5
CTSL-204ENST00000375894 RNF123Q5XPI4 1314 aa18.2■□□□□ 0.5
CTSL-204ENST00000375894 NBPF26B4DH59 902 aa18.19■□□□□ 0.5
CTSL-204ENST00000375894 ITGBL1O95965 494 aaPredicted RBP18.19■□□□□ 0.5
CTSL-204ENST00000375894 U2AF1L5P0DN76 240 aaPredicted RBP18.19■□□□□ 0.5
CTSL-204ENST00000375894 EPHX2P34913 555 aa18.19■□□□□ 0.5
CTSL-204ENST00000375894 CTCFP49711 727 aaPredicted RBP18.19■□□□□ 0.5
CTSL-204ENST00000375894 U2AF1Q01081 240 aaKnown RBP eCLIP18.19■□□□□ 0.5
CTSL-204ENST00000375894 NBPF10Q6P3W6 841 aaKnown RBP18.19■□□□□ 0.5
CTSL-204ENST00000375894 NBPF15Q8N660 670 aa18.19■□□□□ 0.5
CTSL-204ENST00000375894 NUDCQ9Y266 331 aa18.19■□□□□ 0.5
CTSL-204ENST00000375894 LTBP1Q14766 1721 aa18.18■□□□□ 0.5
CTSL-204ENST00000375894 KLRG2A4D1S0 409 aaPredicted RBP18.18■□□□□ 0.5
CTSL-204ENST00000375894 IARSP41252 1262 aaKnown RBP18.18■□□□□ 0.5
CTSL-204ENST00000375894 DCTN1Q14203 1278 aa18.18■□□□□ 0.5
CTSL-204ENST00000375894 PRDM10Q9NQV6 1147 aa18.18■□□□□ 0.5
CTSL-204ENST00000375894 ALDH1B1P30837 517 aa18.17■□□□□ 0.5
CTSL-204ENST00000375894 HLFQ16534 295 aa18.17■□□□□ 0.5
CTSL-204ENST00000375894 MAP1SQ66K74 1059 aaPredicted RBP18.17■□□□□ 0.5
CTSL-204ENST00000375894 SYNE4Q8N205 404 aa18.17■□□□□ 0.5
CTSL-204ENST00000375894 PNMA8AQ86V59 439 aaPredicted RBP18.16■□□□□ 0.5
CTSL-204ENST00000375894 LAMB2P55268 1798 aa18.16■□□□□ 0.5
CTSL-204ENST00000375894 ABCC12Q96J65 1359 aa18.16■□□□□ 0.5
CTSL-204ENST00000375894 COL4A5P29400 1685 aa18.15■□□□□ 0.5
CTSL-204ENST00000375894 CASP8AP2Q9UKL3 1982 aa18.15■□□□□ 0.5
CTSL-204ENST00000375894 RGL2O15211 777 aa18.15■□□□□ 0.5
CTSL-204ENST00000375894 CNTROBQ8N137 903 aa18.15■□□□□ 0.5
CTSL-204ENST00000375894 GPC2Q8N158 579 aa18.15■□□□□ 0.5
CTSL-204ENST00000375894 NGEFQ8N5V2 710 aa18.15■□□□□ 0.5
CTSL-204ENST00000375894 JDP2Q8WYK2 163 aa18.15■□□□□ 0.5
CTSL-204ENST00000375894 GJA3Q9Y6H8 435 aa18.15■□□□□ 0.5
CTSL-204ENST00000375894 ANKRD36CQ5JPF3 1778 aa18.14■□□□□ 0.5
CTSL-204ENST00000375894 PDE4DIPQ5VU43 2346 aa18.14■□□□□ 0.49
CTSL-204ENST00000375894 POLR2AP24928 1970 aaKnown RBP18.14■□□□□ 0.49
CTSL-204ENST00000375894 FZD9O00144 591 aa18.14■□□□□ 0.49
CTSL-204ENST00000375894 LBX1P52954 281 aa18.14■□□□□ 0.49
CTSL-204ENST00000375894 NUTM1Q86Y26 1132 aa18.14■□□□□ 0.49
CTSL-204ENST00000375894 MIS18AQ9NYP9 233 aa18.14■□□□□ 0.49
CTSL-204ENST00000375894 ABT1Q9ULW3 272 aaKnown RBP18.14■□□□□ 0.49
CTSL-204ENST00000375894 TAF1P21675 1872 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms