RNA–Protein interactions for RNA: ENST00000375225.7

UBR4-203, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-203ENST00000375225 DDX54Q8TDD1 881 aaKnown RBP14.88□□□□□ -0.03
UBR4-203ENST00000375225 RBM42Q9BTD8 480 aaKnown RBP14.88□□□□□ -0.03
UBR4-203ENST00000375225 PHAXQ9H814 394 aaKnown RBP14.88□□□□□ -0.03
UBR4-203ENST00000375225 CHPF2Q9P2E5 772 aa14.88□□□□□ -0.03
UBR4-203ENST00000375225 FSD2A1L4K1 749 aa14.87□□□□□ -0.03
UBR4-203ENST00000375225 ERVV-2B6SEH9 535 aa14.87□□□□□ -0.03
UBR4-203ENST00000375225 SRGAP3O43295 1099 aa14.87□□□□□ -0.03
UBR4-203ENST00000375225 BEND3Q5T5X7 828 aa14.87□□□□□ -0.03
UBR4-203ENST00000375225 PPP1R42Q7Z4L9 355 aa14.87□□□□□ -0.03
UBR4-203ENST00000375225 TTC5Q8N0Z6 440 aa14.87□□□□□ -0.03
UBR4-203ENST00000375225 CNTROBQ8N137 903 aa14.87□□□□□ -0.03
UBR4-203ENST00000375225 NGLY1Q96IV0 654 aa14.87□□□□□ -0.03
UBR4-203ENST00000375225 C8orf37Q96NL8 207 aa14.87□□□□□ -0.03
UBR4-203ENST00000375225 BRPF3Q9ULD4 1205 aa14.87□□□□□ -0.03
UBR4-203ENST00000375225 CCDC9Q9Y3X0 531 aaKnown RBP14.87□□□□□ -0.03
UBR4-203ENST00000375225 TNS2Q63HR2 1409 aa14.87□□□□□ -0.03
UBR4-203ENST00000375225 AK9Q5TCS8 1911 aa14.87□□□□□ -0.03
UBR4-203ENST00000375225 PI4KAP2A4QPH2 592 aa14.87□□□□□ -0.03
UBR4-203ENST00000375225 CD2BP2O95400 341 aaKnown RBP14.87□□□□□ -0.03
UBR4-203ENST00000375225 CHMLP26374 656 aa14.87□□□□□ -0.03
UBR4-203ENST00000375225 HSPA1LP34931 641 aa14.87□□□□□ -0.03
UBR4-203ENST00000375225 UNC5CLQ8IV45 518 aa14.87□□□□□ -0.03
UBR4-203ENST00000375225 PI4KAP1Q8N8J0 262 aa14.87□□□□□ -0.03
UBR4-203ENST00000375225 NFATC2IPQ8NCF5 419 aa14.87□□□□□ -0.03
UBR4-203ENST00000375225 LRP6O75581 1613 aa14.86□□□□□ -0.03
UBR4-203ENST00000375225 SPATA31A5Q5VU36 1347 aa14.86□□□□□ -0.03
UBR4-203ENST00000375225 TTC41PQ6P2S7 1318 aa14.86□□□□□ -0.03
UBR4-203ENST00000375225 SPATA31A7Q8IWB4 1347 aa14.86□□□□□ -0.03
UBR4-203ENST00000375225 EXOC5O00471 708 aa14.86□□□□□ -0.03
UBR4-203ENST00000375225 OS9Q13438 667 aaPredicted RBP14.86□□□□□ -0.03
UBR4-203ENST00000375225 MEX3CQ5U5Q3 659 aaKnown RBP14.86□□□□□ -0.03
UBR4-203ENST00000375225 ZNF790Q6PG37 636 aa14.86□□□□□ -0.03
UBR4-203ENST00000375225 KSR2Q6VAB6 950 aa14.86□□□□□ -0.03
UBR4-203ENST00000375225 FAM43AQ8N2R8 423 aa14.86□□□□□ -0.03
UBR4-203ENST00000375225 RHPN1Q8TCX5 695 aa14.86□□□□□ -0.03
UBR4-203ENST00000375225 RUFY2Q8WXA3 655 aa14.86□□□□□ -0.03
UBR4-203ENST00000375225 C9orf78Q9NZ63 289 aaPredicted RBP14.86□□□□□ -0.03
UBR4-203ENST00000375225 PAPPAQ13219 1627 aa14.85□□□□□ -0.03
UBR4-203ENST00000375225 TOGARAM1Q9Y4F4 1720 aa14.85□□□□□ -0.03
UBR4-203ENST00000375225 MTX1Q13505 466 aa14.85□□□□□ -0.03
UBR4-203ENST00000375225 IL17RAQ96F46 866 aa14.85□□□□□ -0.03
UBR4-203ENST00000375225 ANO2Q9NQ90 1003 aa14.85□□□□□ -0.03
UBR4-203ENST00000375225 FOXD4L1Q9NU39 408 aa14.85□□□□□ -0.03
UBR4-203ENST00000375225 KCNQ3O43525 872 aa14.84□□□□□ -0.03
UBR4-203ENST00000375225 GIGYF1O75420 1035 aaPredicted RBP14.84□□□□□ -0.03
UBR4-203ENST00000375225 GLRX3O76003 335 aaKnown RBP14.84□□□□□ -0.03
UBR4-203ENST00000375225 BARGINQ6ZT62 677 aa14.84□□□□□ -0.03
UBR4-203ENST00000375225 CLASRPQ8N2M8 674 aaKnown RBP14.84□□□□□ -0.03
UBR4-203ENST00000375225 GZF1Q9H116 711 aaPredicted RBP14.84□□□□□ -0.03
UBR4-203ENST00000375225 HEG1Q9ULI3 1381 aa14.84□□□□□ -0.03
UBR4-203ENST00000375225 USP42Q9H9J4 1324 aaKnown RBP14.84□□□□□ -0.03
UBR4-203ENST00000375225 LAMB4A4D0S4 1761 aa14.83□□□□□ -0.03
UBR4-203ENST00000375225 UBR2Q8IWV8 1755 aa14.83□□□□□ -0.03
UBR4-203ENST00000375225 BAG4O95429 457 aaKnown RBP14.83□□□□□ -0.04
UBR4-203ENST00000375225 VPS72Q15906 364 aa14.83□□□□□ -0.04
UBR4-203ENST00000375225 KIAA1211Q6ZU35 1233 aa14.83□□□□□ -0.04
UBR4-203ENST00000375225 INTS4Q96HW7 963 aaKnown RBP14.83□□□□□ -0.04
UBR4-203ENST00000375225 BCL9LQ86UU0 1499 aa14.83□□□□□ -0.04
UBR4-203ENST00000375225 C5P01031 1676 aa14.83□□□□□ -0.04
UBR4-203ENST00000375225 ITGB4P16144 1822 aa14.82□□□□□ -0.04
UBR4-203ENST00000375225 SSFA2P28290 1259 aa14.82□□□□□ -0.04
UBR4-203ENST00000375225 NEK4P51957 841 aa14.82□□□□□ -0.04
UBR4-203ENST00000375225 NEXNQ0ZGT2 675 aa14.82□□□□□ -0.04
UBR4-203ENST00000375225 DDB1Q16531 1140 aa14.82□□□□□ -0.04
UBR4-203ENST00000375225 KLHL40Q2TBA0 621 aa14.82□□□□□ -0.04
UBR4-203ENST00000375225 FNBP4Q8N3X1 1017 aaPredicted RBP14.82□□□□□ -0.04
UBR4-203ENST00000375225 LINS1Q8NG48 757 aa14.82□□□□□ -0.04
UBR4-203ENST00000375225 FMNL2Q96PY5 1086 aa14.82□□□□□ -0.04
UBR4-203ENST00000375225 DDX21Q9NR30 783 aaKnown RBP eCLIP14.82□□□□□ -0.04
UBR4-203ENST00000375225 ADCY9O60503 1353 aa14.82□□□□□ -0.04
UBR4-203ENST00000375225 HIP1O00291 1037 aa14.82□□□□□ -0.04
UBR4-203ENST00000375225 SLC39A6Q13433 755 aa14.82□□□□□ -0.04
UBR4-203ENST00000375225 ANP32BQ92688 251 aaKnown RBP14.82□□□□□ -0.04
UBR4-203ENST00000375225 TMOD3Q9NYL9 352 aa14.82□□□□□ -0.04
UBR4-203ENST00000375225 MAP3K2Q9Y2U5 619 aa14.82□□□□□ -0.04
UBR4-203ENST00000375225 GRPEL1Q9HAV7 217 aa14.81□□□□□ -0.04
UBR4-203ENST00000375225 IL1RAPL2Q9NP60 686 aa14.81□□□□□ -0.04
UBR4-203ENST00000375225 USP21Q9UK80 565 aa14.81□□□□□ -0.04
UBR4-203ENST00000375225 DDX49Q9Y6V7 483 aaKnown RBP14.81□□□□□ -0.04
UBR4-203ENST00000375225 DOT1LQ8TEK3 1739 aa14.81□□□□□ -0.04
UBR4-203ENST00000375225 CYP2E1P05181 493 aaPredicted RBP14.8□□□□□ -0.04
UBR4-203ENST00000375225 NBPF7P0C2Y1 421 aaPredicted RBP14.8□□□□□ -0.04
UBR4-203ENST00000375225 SNRPA1P09661 255 aaKnown RBP14.79□□□□□ -0.04
UBR4-203ENST00000375225 IFIT2P09913 472 aaKnown RBP14.79□□□□□ -0.04
UBR4-203ENST00000375225 NUTM1Q86Y26 1132 aa14.79□□□□□ -0.04
UBR4-203ENST00000375225 UTYO14607 1347 aa14.79□□□□□ -0.04
UBR4-203ENST00000375225 GRM8O00222 908 aa14.78□□□□□ -0.04
UBR4-203ENST00000375225 XRCC6P12956 609 aaKnown RBP eCLIP14.78□□□□□ -0.048e-6■■□□□ 12.6
UBR4-203ENST00000375225 HSPA4P34932 840 aa14.78□□□□□ -0.04
UBR4-203ENST00000375225 G3BP1Q13283 466 aaKnown RBP eCLIP14.78□□□□□ -0.04
UBR4-203ENST00000375225 CUL4AQ13619 759 aa14.78□□□□□ -0.04
UBR4-203ENST00000375225 PI4K2BQ8TCG2 481 aa14.78□□□□□ -0.04
UBR4-203ENST00000375225 ZNF496Q96IT1 587 aaPredicted RBP14.78□□□□□ -0.04
UBR4-203ENST00000375225 TMX3Q96JJ7 454 aa14.78□□□□□ -0.04
UBR4-203ENST00000375225 DIAPH3Q9NSV4 1193 aa14.78□□□□□ -0.04
UBR4-203ENST00000375225 TSHZ3Q63HK5 1081 aa14.77□□□□□ -0.04
UBR4-203ENST00000375225 MCTP1Q6DN14 999 aa14.77□□□□□ -0.04
UBR4-203ENST00000375225 RIC3Q7Z5B4 369 aa14.77□□□□□ -0.04
UBR4-203ENST00000375225 ECHDC1Q9NTX5 307 aa14.77□□□□□ -0.04
UBR4-203ENST00000375225 RAD50Q92878 1312 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms