RNA–Protein interactions for RNA: ENST00000374487.6

HMGCL-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 2

Gene HMGCL, Length 2,151 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-202ENST00000374487 DCAF5Q96JK2 942 aa14.91□□□□□ -0.02
HMGCL-202ENST00000374487 RREB1Q92766 1687 aa14.9□□□□□ -0.02
HMGCL-202ENST00000374487 ITGB4P16144 1822 aa14.9□□□□□ -0.02
HMGCL-202ENST00000374487 UBTFL1P0CB47 393 aaPredicted RBP14.9□□□□□ -0.02
HMGCL-202ENST00000374487 TMOD3Q9NYL9 352 aa14.9□□□□□ -0.02
HMGCL-202ENST00000374487 EXOC6BQ9Y2D4 811 aa14.9□□□□□ -0.02
HMGCL-202ENST00000374487 RNMTO43148 476 aaKnown RBP14.9□□□□□ -0.02
HMGCL-202ENST00000374487 ATP8B2P98198 1209 aa14.9□□□□□ -0.02
HMGCL-202ENST00000374487 SMIM5Q71RC9 77 aa14.9□□□□□ -0.02
HMGCL-202ENST00000374487 SNX21Q969T3 373 aa14.9□□□□□ -0.02
HMGCL-202ENST00000374487 KCNQ3O43525 872 aa14.89□□□□□ -0.03
HMGCL-202ENST00000374487 SDSP20132 328 aa14.89□□□□□ -0.03
HMGCL-202ENST00000374487 ZNF827Q17R98 1081 aa14.89□□□□□ -0.03
HMGCL-202ENST00000374487 LRRCC1Q9C099 1032 aa14.89□□□□□ -0.03
HMGCL-202ENST00000374487 ATG3Q9NT62 314 aa14.89□□□□□ -0.03
HMGCL-202ENST00000374487 CHPF2Q9P2E5 772 aa14.89□□□□□ -0.03
HMGCL-202ENST00000374487 LRRFIP2Q9Y608 721 aaKnown RBP14.89□□□□□ -0.03
HMGCL-202ENST00000374487 CABP4P57796 275 aa14.88□□□□□ -0.03
HMGCL-202ENST00000374487 SRCIN1Q9C0H9 1055 aa14.88□□□□□ -0.03
HMGCL-202ENST00000374487 USP44Q9H0E7 712 aa14.88□□□□□ -0.03
HMGCL-202ENST00000374487 CHMP5Q9NZZ3 219 aa14.88□□□□□ -0.03
HMGCL-202ENST00000374487 PNMA6EA0A0J9YXQ4 647 aa14.88□□□□□ -0.03
HMGCL-202ENST00000374487 HSP90AB1P08238 724 aaKnown RBP14.88□□□□□ -0.03
HMGCL-202ENST00000374487 PALLDQ8WX93 1383 aa14.88□□□□□ -0.03
HMGCL-202ENST00000374487 SLC39A6Q13433 755 aa14.87□□□□□ -0.03
HMGCL-202ENST00000374487 SLC4A9Q96Q91 983 aa14.87□□□□□ -0.03
HMGCL-202ENST00000374487 CCNL1Q9UK58 526 aaPredicted RBP14.87□□□□□ -0.03
HMGCL-202ENST00000374487 PXDNLA1KZ92 1463 aa14.87□□□□□ -0.03
HMGCL-202ENST00000374487 PDE1AP54750 535 aa14.87□□□□□ -0.03
HMGCL-202ENST00000374487 KIF2CQ99661 725 aa14.87□□□□□ -0.03
HMGCL-202ENST00000374487 ERVV-2B6SEH9 535 aa14.86□□□□□ -0.03
HMGCL-202ENST00000374487 PI4KAP2A4QPH2 592 aa14.85□□□□□ -0.03
HMGCL-202ENST00000374487 PTCD1O75127 700 aaKnown RBP14.85□□□□□ -0.03
HMGCL-202ENST00000374487 HSP90AA1P07900 732 aaKnown RBP14.85□□□□□ -0.03
HMGCL-202ENST00000374487 PI4KAP1Q8N8J0 262 aa14.85□□□□□ -0.03
HMGCL-202ENST00000374487 OSBPL3Q9H4L5 887 aa14.85□□□□□ -0.03
HMGCL-202ENST00000374487 DBF4Q9UBU7 674 aaPredicted RBP14.85□□□□□ -0.03
HMGCL-202ENST00000374487 ITPK1Q13572 414 aa14.85□□□□□ -0.03
HMGCL-202ENST00000374487 AMIGO3Q86WK7 504 aa14.85□□□□□ -0.03
HMGCL-202ENST00000374487 DNAAF4Q8WXU2 420 aa14.85□□□□□ -0.03
HMGCL-202ENST00000374487 CACNA1FO60840 1977 aa14.85□□□□□ -0.03
HMGCL-202ENST00000374487 NBPF14Q5TI25 921 aa14.84□□□□□ -0.03
HMGCL-202ENST00000374487 RBM42Q9BTD8 480 aaKnown RBP14.84□□□□□ -0.03
HMGCL-202ENST00000374487 SLC52A2Q9HAB3 445 aa14.84□□□□□ -0.03
HMGCL-202ENST00000374487 PLEKHG2Q9H7P9 1386 aa14.84□□□□□ -0.03
HMGCL-202ENST00000374487 REC8O95072 547 aa14.84□□□□□ -0.03
HMGCL-202ENST00000374487 ANXA1P04083 346 aa14.84□□□□□ -0.03
HMGCL-202ENST00000374487 SLC15A2Q16348 729 aa14.84□□□□□ -0.03
HMGCL-202ENST00000374487 RGPD3A6NKT7 1758 aaPredicted RBP14.83□□□□□ -0.03
HMGCL-202ENST00000374487 RGPD4Q7Z3J3 1758 aa14.83□□□□□ -0.03
HMGCL-202ENST00000374487 IBTKQ9P2D0 1353 aaPredicted RBP14.83□□□□□ -0.03
HMGCL-202ENST00000374487 LOC102724428A0A0B4J2F2 783 aa14.83□□□□□ -0.04
HMGCL-202ENST00000374487 GIGYF1O75420 1035 aaPredicted RBP14.83□□□□□ -0.04
HMGCL-202ENST00000374487 MX1P20591 662 aa14.83□□□□□ -0.04
HMGCL-202ENST00000374487 SIK1P57059 783 aa14.83□□□□□ -0.04
HMGCL-202ENST00000374487 USP26Q9BXU7 913 aa14.83□□□□□ -0.04
HMGCL-202ENST00000374487 LY75O60449 1722 aa14.83□□□□□ -0.04
HMGCL-202ENST00000374487 BEND3Q5T5X7 828 aa14.83□□□□□ -0.04
HMGCL-202ENST00000374487 AKT1S1Q96B36 256 aa14.83□□□□□ -0.04
HMGCL-202ENST00000374487 ADAMTS7Q9UKP4 1686 aa14.82□□□□□ -0.04
HMGCL-202ENST00000374487 SCN11AQ9UI33 1791 aa14.82□□□□□ -0.04
HMGCL-202ENST00000374487 K7ELQ4 463 aaPredicted RBP14.82□□□□□ -0.04
HMGCL-202ENST00000374487 PPP1R42Q7Z4L9 355 aa14.82□□□□□ -0.04
HMGCL-202ENST00000374487 LINC00116Q8NCU8 138 aa14.82□□□□□ -0.04
HMGCL-202ENST00000374487 SSH3Q8TE77 659 aa14.82□□□□□ -0.04
HMGCL-202ENST00000374487 SURF6O75683 361 aaKnown RBP14.81□□□□□ -0.04
HMGCL-202ENST00000374487 NBPF7P0C2Y1 421 aaPredicted RBP14.81□□□□□ -0.04
HMGCL-202ENST00000374487 ATP6V1AP38606 617 aa14.81□□□□□ -0.04
HMGCL-202ENST00000374487 RABEP1Q15276 862 aa14.81□□□□□ -0.04
HMGCL-202ENST00000374487 SLC27A3Q5K4L6 730 aa14.81□□□□□ -0.04
HMGCL-202ENST00000374487 STK32BQ9NY57 414 aa14.81□□□□□ -0.04
HMGCL-202ENST00000374487 PAPPAQ13219 1627 aa14.81□□□□□ -0.04
HMGCL-202ENST00000374487 ERC2O15083 957 aa14.81□□□□□ -0.04
HMGCL-202ENST00000374487 SRGAP3O43295 1099 aa14.81□□□□□ -0.04
HMGCL-202ENST00000374487 TSHZ3Q63HK5 1081 aa14.81□□□□□ -0.04
HMGCL-202ENST00000374487 KDM3BQ7LBC6 1761 aa14.81□□□□□ -0.04
HMGCL-202ENST00000374487 RAB11FIP3O75154 756 aa14.8□□□□□ -0.04
HMGCL-202ENST00000374487 ZBTB7AO95365 584 aa14.8□□□□□ -0.04
HMGCL-202ENST00000374487 CD2BP2O95400 341 aaKnown RBP14.8□□□□□ -0.04
HMGCL-202ENST00000374487 SMARCC1Q92922 1105 aaPredicted RBP14.8□□□□□ -0.04
HMGCL-202ENST00000374487 HEG1Q9ULI3 1381 aa14.8□□□□□ -0.04
HMGCL-202ENST00000374487 TRIM6-TRIM34B2RNG4 842 aa14.8□□□□□ -0.04
HMGCL-202ENST00000374487 MCM4P33991 863 aa14.8□□□□□ -0.04
HMGCL-202ENST00000374487 HYPKQ9NX55 129 aa14.8□□□□□ -0.04
HMGCL-202ENST00000374487 MAP3K2Q9Y2U5 619 aa14.8□□□□□ -0.04
HMGCL-202ENST00000374487 SALL3Q9BXA9 1300 aa14.79□□□□□ -0.04
HMGCL-202ENST00000374487 RILPL2Q969X0 211 aa14.79□□□□□ -0.04
HMGCL-202ENST00000374487 IL1RAPL2Q9NP60 686 aa14.79□□□□□ -0.04
HMGCL-202ENST00000374487 C9orf78Q9NZ63 289 aaPredicted RBP14.79□□□□□ -0.04
HMGCL-202ENST00000374487 TFCP2L1Q9NZI6 479 aa14.79□□□□□ -0.04
HMGCL-202ENST00000374487 ADCY9O60503 1353 aa14.79□□□□□ -0.04
HMGCL-202ENST00000374487 KSR2Q6VAB6 950 aa14.78□□□□□ -0.04
HMGCL-202ENST00000374487 STAP2Q9UGK3 403 aa14.78□□□□□ -0.04
HMGCL-202ENST00000374487 CIZ1Q9ULV3 898 aaPredicted RBP14.78□□□□□ -0.04
HMGCL-202ENST00000374487 ATF5Q9Y2D1 282 aaPredicted RBP14.78□□□□□ -0.04
HMGCL-202ENST00000374487 PNPLA7Q6ZV29 1317 aa14.78□□□□□ -0.04
HMGCL-202ENST00000374487 PRAMEF22A3QJZ6 481 aa14.78□□□□□ -0.04
HMGCL-202ENST00000374487 POLA2Q14181 598 aa14.78□□□□□ -0.04
HMGCL-202ENST00000374487 PROSER3Q2NL68 480 aa14.78□□□□□ -0.04
HMGCL-202ENST00000374487 FOXD4L1Q9NU39 408 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms