RNA–Protein interactions for RNA: ENST00000374429.6

CXCL12-203, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CXCL12, Length 3,532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-203ENST00000374429 CNTROBQ8N137 903 aa13.07□□□□□ -0.32
CXCL12-203ENST00000374429 TMX3Q96JJ7 454 aa13.07□□□□□ -0.32
CXCL12-203ENST00000374429 ERBB3P21860 1342 aa13.07□□□□□ -0.32
CXCL12-203ENST00000374429 FAM182BQ5T319 152 aa13.07□□□□□ -0.32
CXCL12-203ENST00000374429 CADPS2Q86UW7 1296 aa13.07□□□□□ -0.32
CXCL12-203ENST00000374429 TRIM44Q96DX7 344 aaPredicted RBP13.07□□□□□ -0.32
CXCL12-203ENST00000374429 PTCH1Q13635 1447 aa13.06□□□□□ -0.32
CXCL12-203ENST00000374429 HSP90B1P14625 803 aaKnown RBP13.06□□□□□ -0.32
CXCL12-203ENST00000374429 CHST3Q7LGC8 479 aa13.06□□□□□ -0.32
CXCL12-203ENST00000374429 CCDC83Q8IWF9 413 aa13.06□□□□□ -0.32
CXCL12-203ENST00000374429 USP31Q70CQ4 1352 aa13.06□□□□□ -0.32
CXCL12-203ENST00000374429 FIBPO43427 364 aa13.06□□□□□ -0.32
CXCL12-203ENST00000374429 FBXW7Q969H0 707 aa13.06□□□□□ -0.32
CXCL12-203ENST00000374429 RGPD8O14715 1765 aaPredicted RBP13.06□□□□□ -0.32
CXCL12-203ENST00000374429 BRPF1P55201 1214 aaPredicted RBP13.06□□□□□ -0.32
CXCL12-203ENST00000374429 FAM89AQ96GI7 184 aa13.06□□□□□ -0.32
CXCL12-203ENST00000374429 SEC62Q99442 399 aaKnown RBP13.06□□□□□ -0.32
CXCL12-203ENST00000374429 BTG4Q9NY30 223 aa13.06□□□□□ -0.32
CXCL12-203ENST00000374429 FAM173BQ6P4H8 233 aa13.05□□□□□ -0.32
CXCL12-203ENST00000374429 PAXIP1Q6ZW49 1069 aaPredicted RBP13.05□□□□□ -0.32
CXCL12-203ENST00000374429 EAF2Q96CJ1 260 aaPredicted RBP13.05□□□□□ -0.32
CXCL12-203ENST00000374429 ARID3AQ99856 593 aa13.05□□□□□ -0.32
CXCL12-203ENST00000374429 TBC1D2BQ9UPU7 963 aa13.05□□□□□ -0.32
CXCL12-203ENST00000374429 NPHP4O75161 1426 aaPredicted RBP13.05□□□□□ -0.32
CXCL12-203ENST00000374429 RASEFQ8IZ41 740 aa13.05□□□□□ -0.32
CXCL12-203ENST00000374429 NRXN3Q9Y4C0 1643 aa13.05□□□□□ -0.32
CXCL12-203ENST00000374429 DIP2AQ14689 1571 aa13.05□□□□□ -0.32
CXCL12-203ENST00000374429 XRCC6P12956 609 aaKnown RBP eCLIP13.05□□□□□ -0.32
CXCL12-203ENST00000374429 PHKG2P15735 406 aa13.05□□□□□ -0.32
CXCL12-203ENST00000374429 TFCP2Q12800 502 aa13.05□□□□□ -0.32
CXCL12-203ENST00000374429 BICDL1Q6ZP65 573 aa13.05□□□□□ -0.32
CXCL12-203ENST00000374429 CCDC24Q8N4L8 307 aa13.05□□□□□ -0.32
CXCL12-203ENST00000374429 HELBQ8NG08 1087 aaPredicted RBP13.05□□□□□ -0.32
CXCL12-203ENST00000374429 SLC52A2Q9HAB3 445 aa13.05□□□□□ -0.32
CXCL12-203ENST00000374429 SLAIN2Q9P270 581 aa13.05□□□□□ -0.32
CXCL12-203ENST00000374429 PTH1RQ03431 593 aa13.04□□□□□ -0.32
CXCL12-203ENST00000374429 DDX11Q96FC9 970 aa13.04□□□□□ -0.32
CXCL12-203ENST00000374429 GPATCH3Q96I76 525 aa13.04□□□□□ -0.32
CXCL12-203ENST00000374429 NPHP3Q7Z494 1330 aa13.04□□□□□ -0.32
CXCL12-203ENST00000374429 UTRNP46939 3433 aa13.04□□□□□ -0.32
CXCL12-203ENST00000374429 BAG4O95429 457 aaKnown RBP13.04□□□□□ -0.32
CXCL12-203ENST00000374429 ZCRB1Q8TBF4 217 aaKnown RBP13.04□□□□□ -0.32
CXCL12-203ENST00000374429 TECPR2O15040 1411 aa13.04□□□□□ -0.32
CXCL12-203ENST00000374429 NCBP3Q53F19 620 aaKnown RBP13.04□□□□□ -0.32
CXCL12-203ENST00000374429 ASAP1Q9ULH1 1129 aa13.04□□□□□ -0.32
CXCL12-203ENST00000374429 KIF13AQ9H1H9 1805 aa13.03□□□□□ -0.32
CXCL12-203ENST00000374429 ADGRB2O60241 1585 aa13.03□□□□□ -0.32
CXCL12-203ENST00000374429 DDX11L8A8MPP1 907 aa13.03□□□□□ -0.32
CXCL12-203ENST00000374429 COL9A3Q14050 684 aaPredicted RBP13.03□□□□□ -0.32
CXCL12-203ENST00000374429 BBXQ8WY36 941 aaPredicted RBP13.03□□□□□ -0.32
CXCL12-203ENST00000374429 FMNL2Q96PY5 1086 aa13.03□□□□□ -0.32
CXCL12-203ENST00000374429 HYPKQ9NX55 129 aa13.03□□□□□ -0.32
CXCL12-203ENST00000374429 ATP10DQ9P241 1426 aa13.03□□□□□ -0.32
CXCL12-203ENST00000374429 NPHP1O15259 732 aa13.03□□□□□ -0.32
CXCL12-203ENST00000374429 HTATSF1O43719 755 aaKnown RBP13.03□□□□□ -0.32
CXCL12-203ENST00000374429 IGKV5-2P06315 115 aa13.03□□□□□ -0.32
CXCL12-203ENST00000374429 SNRPA1P09661 255 aaKnown RBP13.03□□□□□ -0.32
CXCL12-203ENST00000374429 ANP32BQ92688 251 aaKnown RBP13.03□□□□□ -0.32
CXCL12-203ENST00000374429 SNAP23O00161 211 aa13.02□□□□□ -0.32
CXCL12-203ENST00000374429 GOLIM4O00461 696 aa13.02□□□□□ -0.32
CXCL12-203ENST00000374429 WASHC4Q2M389 1173 aa13.02□□□□□ -0.32
CXCL12-203ENST00000374429 GAS2L3Q86XJ1 694 aa13.02□□□□□ -0.32
CXCL12-203ENST00000374429 DDX21Q9NR30 783 aaKnown RBP eCLIP13.02□□□□□ -0.32
CXCL12-203ENST00000374429 IQSEC3Q9UPP2 1182 aaPredicted RBP13.02□□□□□ -0.32
CXCL12-203ENST00000374429 HAND2P61296 217 aa13.02□□□□□ -0.32
CXCL12-203ENST00000374429 ADCK5Q3MIX3 580 aa13.02□□□□□ -0.32
CXCL12-203ENST00000374429 ECHDC1Q9NTX5 307 aa13.02□□□□□ -0.32
CXCL12-203ENST00000374429 KIF20BQ96Q89 1820 aa13.02□□□□□ -0.33
CXCL12-203ENST00000374429 DBNDD2Q9BQY9 259 aa13.02□□□□□ -0.33
CXCL12-203ENST00000374429 SYCE3A1L190 88 aa13.01□□□□□ -0.33
CXCL12-203ENST00000374429 LINS1Q8NG48 757 aa13.01□□□□□ -0.33
CXCL12-203ENST00000374429 RGS12O14924 1447 aa13.01□□□□□ -0.33
CXCL12-203ENST00000374429 NMIQ13287 307 aaPredicted RBP13.01□□□□□ -0.33
CXCL12-203ENST00000374429 BRINP3Q76B58 766 aa13.01□□□□□ -0.33
CXCL12-203ENST00000374429 SSH3Q8TE77 659 aa13.01□□□□□ -0.33
CXCL12-203ENST00000374429 APPP05067 770 aa13.01□□□□□ -0.33
CXCL12-203ENST00000374429 GUCY1B3Q02153 619 aa13□□□□□ -0.33
CXCL12-203ENST00000374429 TMOD3Q9NYL9 352 aa13□□□□□ -0.33
CXCL12-203ENST00000374429 TAF6LQ9Y6J9 622 aa13□□□□□ -0.33
CXCL12-203ENST00000374429 AK9Q5TCS8 1911 aa13□□□□□ -0.33
CXCL12-203ENST00000374429 KDRP35968 1356 aa13□□□□□ -0.33
CXCL12-203ENST00000374429 DNAJC10Q8IXB1 793 aa13□□□□□ -0.33
CXCL12-203ENST00000374429 PUS3Q9BZE2 481 aaKnown RBP13□□□□□ -0.33
CXCL12-203ENST00000374429 TOMM22Q9NS69 142 aa13□□□□□ -0.33
CXCL12-203ENST00000374429 NSFL1CQ9UNZ2 370 aaKnown RBP13□□□□□ -0.33
CXCL12-203ENST00000374429 SMC3Q9UQE7 1217 aa13□□□□□ -0.33
CXCL12-203ENST00000374429 PXDNQ92626 1479 aa13□□□□□ -0.33
CXCL12-203ENST00000374429 ADCY9O60503 1353 aa13□□□□□ -0.33
CXCL12-203ENST00000374429 SASH1O94885 1247 aa13□□□□□ -0.33
CXCL12-203ENST00000374429 UBR1Q8IWV7 1749 aa13□□□□□ -0.33
CXCL12-203ENST00000374429 GLRX3O76003 335 aaKnown RBP12.99□□□□□ -0.33
CXCL12-203ENST00000374429 GCKRQ14397 625 aa12.99□□□□□ -0.33
CXCL12-203ENST00000374429 TFIP11Q9UBB9 837 aaKnown RBP12.99□□□□□ -0.33
CXCL12-203ENST00000374429 NEURL1BA8MQ27 555 aa12.99□□□□□ -0.33
CXCL12-203ENST00000374429 ZKSCAN1P17029 563 aaPredicted RBP12.99□□□□□ -0.33
CXCL12-203ENST00000374429 AK2P54819 239 aa12.99□□□□□ -0.33
CXCL12-203ENST00000374429 LRRC24Q50LG9 513 aa12.99□□□□□ -0.33
CXCL12-203ENST00000374429 PTMAP06454 111 aaKnown RBP12.99□□□□□ -0.33
CXCL12-203ENST00000374429 PI16Q6UXB8 463 aa12.99□□□□□ -0.33
CXCL12-203ENST00000374429 GRPEL1Q9HAV7 217 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms