RNA–Protein interactions for RNA: ENST00000373556.7

HDAC8-202, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-202ENST00000373556 LAMB4A4D0S4 1761 aa21.43■■□□□ 1.02
HDAC8-202ENST00000373556 SLX4Q8IY92 1834 aa21.43■■□□□ 1.02
HDAC8-202ENST00000373556 FER1L6Q2WGJ9 1857 aa21.43■■□□□ 1.02
HDAC8-202ENST00000373556 NEFMP07197 916 aa21.42■■□□□ 1.02
HDAC8-202ENST00000373556 KDM3BQ7LBC6 1761 aa21.42■■□□□ 1.02
HDAC8-202ENST00000373556 WDR90Q96KV7 1748 aa21.42■■□□□ 1.02
HDAC8-202ENST00000373556 ZC3H4Q9UPT8 1303 aaKnown RBP21.42■■□□□ 1.02
HDAC8-202ENST00000373556 NBPF5PQ86XG9 351 aaPredicted RBP21.41■■□□□ 1.02
HDAC8-202ENST00000373556 GLTPD2A6NH11 291 aa21.4■■□□□ 1.02
HDAC8-202ENST00000373556 CLEC4GQ6UXB4 293 aa21.4■■□□□ 1.02
HDAC8-202ENST00000373556 PLEKHF1Q96S99 279 aa21.4■■□□□ 1.02
HDAC8-202ENST00000373556 ZNF652Q9Y2D9 606 aa21.4■■□□□ 1.02
HDAC8-202ENST00000373556 ARFGEF2Q9Y6D5 1785 aa21.4■■□□□ 1.02
HDAC8-202ENST00000373556 DICER1Q9UPY3 1922 aaKnown RBP21.39■■□□□ 1.02
HDAC8-202ENST00000373556 SRGNP10124 158 aa21.39■■□□□ 1.01
HDAC8-202ENST00000373556 HTRA3P83110 453 aa21.39■■□□□ 1.01
HDAC8-202ENST00000373556 THUMPD2Q9BTF0 503 aaKnown RBP21.39■■□□□ 1.01
HDAC8-202ENST00000373556 FAM177BA6PVY3 158 aa21.38■■□□□ 1.01
HDAC8-202ENST00000373556 FSTL1Q12841 308 aa21.38■■□□□ 1.01
HDAC8-202ENST00000373556 STYK1Q6J9G0 422 aa21.38■■□□□ 1.01
HDAC8-202ENST00000373556 PRPF40BQ6NWY9 871 aaKnown RBP21.38■■□□□ 1.01
HDAC8-202ENST00000373556 CNKSR1Q969H4 720 aa21.38■■□□□ 1.01
HDAC8-202ENST00000373556 NIP7Q9Y221 180 aaKnown RBP eCLIP21.38■■□□□ 1.01
HDAC8-202ENST00000373556 NFE2L2Q16236 605 aa21.37■■□□□ 1.01
HDAC8-202ENST00000373556 DNAJC5GQ8N7S2 189 aa21.37■■□□□ 1.01
HDAC8-202ENST00000373556 MASTLQ96GX5 879 aa21.37■■□□□ 1.01
HDAC8-202ENST00000373556 HLFQ16534 295 aa21.36■■□□□ 1.01
HDAC8-202ENST00000373556 NGEFQ8N5V2 710 aa21.36■■□□□ 1.01
HDAC8-202ENST00000373556 PNISRQ8TF01 805 aaKnown RBP21.35■■□□□ 1.01
HDAC8-202ENST00000373556 TAOK3Q9H2K8 898 aa21.35■■□□□ 1.01
HDAC8-202ENST00000373556 MAPK8IP3Q9UPT6 1336 aa21.34■■□□□ 1.01
HDAC8-202ENST00000373556 VEGFAP15692 232 aaPredicted RBP21.34■■□□□ 1.01
HDAC8-202ENST00000373556 EIF4A1P60842 406 aaKnown RBP21.34■■□□□ 1.01
HDAC8-202ENST00000373556 ERFEQ4G0M1 354 aa21.34■■□□□ 1.01
HDAC8-202ENST00000373556 SMC1BQ8NDV3 1235 aa21.34■■□□□ 1.01
HDAC8-202ENST00000373556 TPTE2Q6XPS3 522 aa21.33■■□□□ 1.01
HDAC8-202ENST00000373556 NUP98P52948 1817 aa21.33■■□□□ 1.01
HDAC8-202ENST00000373556 LTBP3Q9NS15 1303 aa21.32■■□□□ 1
HDAC8-202ENST00000373556 RGL2O15211 777 aa21.32■■□□□ 1
HDAC8-202ENST00000373556 DPY19L2Q6NUT2 758 aa21.32■■□□□ 1
HDAC8-202ENST00000373556 RRP7AQ9Y3A4 280 aaKnown RBP21.32■■□□□ 1
HDAC8-202ENST00000373556 POTECB2RU33 542 aa21.31■■□□□ 1
HDAC8-202ENST00000373556 MYL6BP14649 208 aa21.31■■□□□ 1
HDAC8-202ENST00000373556 NPR1P16066 1061 aa21.31■■□□□ 1
HDAC8-202ENST00000373556 PNNQ9H307 717 aaKnown RBP21.31■■□□□ 1
HDAC8-202ENST00000373556 KLRG2A4D1S0 409 aaPredicted RBP21.3■■□□□ 1
HDAC8-202ENST00000373556 SOGA3Q5TF21 947 aa21.3■■□□□ 1
HDAC8-202ENST00000373556 IFFO2Q5TF58 517 aa21.3■■□□□ 1
HDAC8-202ENST00000373556 TTLL7Q6ZT98 887 aa21.3■■□□□ 1
HDAC8-202ENST00000373556 C7orf43Q8WVR3 580 aa21.3■■□□□ 1
HDAC8-202ENST00000373556 GTF2E1P29083 439 aaPredicted RBP21.29■■□□□ 1
HDAC8-202ENST00000373556 OLFM4Q6UX06 510 aa21.29■■□□□ 1
HDAC8-202ENST00000373556 MAP3K15Q6ZN16 1313 aa21.29■■□□□ 1
HDAC8-202ENST00000373556 CCDC93Q567U6 631 aa21.28■■□□□ 1
HDAC8-202ENST00000373556 KLRG1Q96E93 195 aa21.28■■□□□ 1
HDAC8-202ENST00000373556 ZBTB3Q9H5J0 574 aa21.28■■□□□ 1
HDAC8-202ENST00000373556 ABCC12Q96J65 1359 aa21.27■■□□□ 1
HDAC8-202ENST00000373556 DDNO94850 711 aaPredicted RBP21.27■■□□□ 1
HDAC8-202ENST00000373556 RIPK4P57078 832 aa21.27■■□□□ 1
HDAC8-202ENST00000373556 RALBP1Q15311 655 aa21.27■■□□□ 1
HDAC8-202ENST00000373556 KIF6Q6ZMV9 814 aa21.27■■□□□ 1
HDAC8-202ENST00000373556 NUTM1Q86Y26 1132 aa21.27■■□□□ 1
HDAC8-202ENST00000373556 ERVV-1B6SEH8 477 aa21.26■□□□□ 0.99
HDAC8-202ENST00000373556 GPTP24298 496 aa21.26■□□□□ 0.99
HDAC8-202ENST00000373556 TSPYL4Q9UJ04 414 aa21.26■□□□□ 0.99
HDAC8-202ENST00000373556 FKBP4Q02790 459 aaKnown RBP eCLIP21.24■□□□□ 0.99
HDAC8-202ENST00000373556 DDX10Q13206 875 aaKnown RBP21.24■□□□□ 0.99
HDAC8-202ENST00000373556 NYXQ9GZU5 481 aa21.24■□□□□ 0.99
HDAC8-202ENST00000373556 ZNF277Q9NRM2 450 aaPredicted RBP21.24■□□□□ 0.99
HDAC8-202ENST00000373556 UBN2Q6ZU65 1347 aa21.24■□□□□ 0.99
HDAC8-202ENST00000373556 POTEIP0CG38 1075 aa21.22■□□□□ 0.99
HDAC8-202ENST00000373556 POTEJP0CG39 1038 aa21.22■□□□□ 0.99
HDAC8-202ENST00000373556 EIF2S2P20042 333 aaKnown RBP21.22■□□□□ 0.99
HDAC8-202ENST00000373556 ALDH1B1P30837 517 aa21.22■□□□□ 0.99
HDAC8-202ENST00000373556 TMPOP42166 694 aaKnown RBP21.22■□□□□ 0.99
HDAC8-202ENST00000373556 CRY2Q49AN0 593 aa21.21■□□□□ 0.99
HDAC8-202ENST00000373556 SUSD4Q5VX71 490 aa21.21■□□□□ 0.99
HDAC8-202ENST00000373556 CCDC146Q8IYE0 955 aa21.21■□□□□ 0.99
HDAC8-202ENST00000373556 RTKN2Q8IZC4 609 aa21.21■□□□□ 0.99
HDAC8-202ENST00000373556 JMYQ8N9B5 988 aa21.21■□□□□ 0.99
HDAC8-202ENST00000373556 ERBB4Q15303 1308 aa21.21■□□□□ 0.99
HDAC8-202ENST00000373556 ANXA1P04083 346 aa21.2■□□□□ 0.98
HDAC8-202ENST00000373556 PDIA6Q15084 440 aa21.2■□□□□ 0.98
HDAC8-202ENST00000373556 NEUROD2Q15784 382 aa21.2■□□□□ 0.98
HDAC8-202ENST00000373556 PROSER3Q2NL68 480 aa21.2■□□□□ 0.98
HDAC8-202ENST00000373556 GIGYF2Q6Y7W6 1299 aaKnown RBP21.2■□□□□ 0.98
HDAC8-202ENST00000373556 ZNF34Q8IZ26 560 aa21.2■□□□□ 0.98
HDAC8-202ENST00000373556 MYBBP1AQ9BQG0 1328 aaKnown RBP21.2■□□□□ 0.98
HDAC8-202ENST00000373556 ZNF541Q9H0D2 1346 aa21.2■□□□□ 0.98
HDAC8-202ENST00000373556 LRP10Q7Z4F1 713 aa21.19■□□□□ 0.98
HDAC8-202ENST00000373556 SYNE4Q8N205 404 aa21.19■□□□□ 0.98
HDAC8-202ENST00000373556 IBTKQ9P2D0 1353 aaPredicted RBP21.19■□□□□ 0.98
HDAC8-202ENST00000373556 PCNTO95613 3336 aa21.19■□□□□ 0.98
HDAC8-202ENST00000373556 SCN4AP35499 1836 aa21.18■□□□□ 0.98
HDAC8-202ENST00000373556 NTSR2O95665 410 aa21.18■□□□□ 0.98
HDAC8-202ENST00000373556 LMOD3Q0VAK6 560 aa21.18■□□□□ 0.98
HDAC8-202ENST00000373556 CHADLQ6NUI6 762 aa21.18■□□□□ 0.98
HDAC8-202ENST00000373556 NECTIN2Q92692 538 aa21.18■□□□□ 0.98
HDAC8-202ENST00000373556 RPGRQ92834 1020 aaKnown RBP21.18■□□□□ 0.98
HDAC8-202ENST00000373556 RIC1Q4ADV7 1423 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms