RNA–Protein interactions for RNA: ENST00000372577.2

NUP188-201, Transcript of nucleoporin 188, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP188, Length 5,689 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-201ENST00000372577 MTHFSDQ2M296 383 aaKnown RBP12.25□□□□□ -0.45
NUP188-201ENST00000372577 CHPF2Q9P2E5 772 aa12.25□□□□□ -0.45
NUP188-201ENST00000372577 KDM5AP29375 1690 aaKnown RBP12.25□□□□□ -0.45
NUP188-201ENST00000372577 SYCE3A1L190 88 aa12.25□□□□□ -0.45
NUP188-201ENST00000372577 CCDC85AQ96PX6 553 aaPredicted RBP12.25□□□□□ -0.45
NUP188-201ENST00000372577 ZBTB40Q9NUA8 1239 aa12.25□□□□□ -0.45
NUP188-201ENST00000372577 PDE4CQ08493 712 aa12.25□□□□□ -0.45
NUP188-201ENST00000372577 ZCRB1Q8TBF4 217 aaKnown RBP12.25□□□□□ -0.45
NUP188-201ENST00000372577 KDM5DQ9BY66 1539 aa12.25□□□□□ -0.45
NUP188-201ENST00000372577 GRM8O00222 908 aa12.25□□□□□ -0.45
NUP188-201ENST00000372577 SSFA2P28290 1259 aa12.25□□□□□ -0.45
NUP188-201ENST00000372577 SBNO1A3KN83 1393 aa12.25□□□□□ -0.45
NUP188-201ENST00000372577 RDXP35241 583 aaKnown RBP12.24□□□□□ -0.45
NUP188-201ENST00000372577 UBE3BQ7Z3V4 1068 aa12.24□□□□□ -0.45
NUP188-201ENST00000372577 SKAP1Q86WV1 359 aa12.24□□□□□ -0.45
NUP188-201ENST00000372577 LINS1Q8NG48 757 aa12.24□□□□□ -0.45
NUP188-201ENST00000372577 CTCFLQ8NI51 663 aaPredicted RBP12.24□□□□□ -0.45
NUP188-201ENST00000372577 MBD5Q9P267 1494 aa12.24□□□□□ -0.45
NUP188-201ENST00000372577 STX6O43752 255 aa12.24□□□□□ -0.45
NUP188-201ENST00000372577 HOXB7P09629 217 aa12.24□□□□□ -0.45
NUP188-201ENST00000372577 CCDC112Q8NEF3 446 aa12.24□□□□□ -0.45
NUP188-201ENST00000372577 SLC12A7Q9Y666 1083 aa12.24□□□□□ -0.45
NUP188-201ENST00000372577 NEK1Q96PY6 1258 aa12.24□□□□□ -0.45
NUP188-201ENST00000372577 C19orf44Q9H6X5 657 aa12.24□□□□□ -0.45
NUP188-201ENST00000372577 PTPRTO14522 1441 aa12.24□□□□□ -0.45
NUP188-201ENST00000372577 ODF2Q5BJF6 829 aa12.24□□□□□ -0.45
NUP188-201ENST00000372577 SAMD1Q6SPF0 538 aaPredicted RBP12.24□□□□□ -0.45
NUP188-201ENST00000372577 ESYT1Q9BSJ8 1104 aa12.24□□□□□ -0.45
NUP188-201ENST00000372577 ZBTB3Q9H5J0 574 aa12.24□□□□□ -0.45
NUP188-201ENST00000372577 PRKCSHP14314 528 aaPredicted RBP12.23□□□□□ -0.45
NUP188-201ENST00000372577 USP5P45974 858 aa12.23□□□□□ -0.45
NUP188-201ENST00000372577 ATP2B2Q01814 1243 aa12.23□□□□□ -0.45
NUP188-201ENST00000372577 LDHAL6AQ6ZMR3 332 aa12.23□□□□□ -0.45
NUP188-201ENST00000372577 IP6K1Q92551 441 aa12.23□□□□□ -0.45
NUP188-201ENST00000372577 SPATA31E1Q6ZUB1 1445 aa12.23□□□□□ -0.45
NUP188-201ENST00000372577 KLHL40Q2TBA0 621 aa12.23□□□□□ -0.45
NUP188-201ENST00000372577 ZSCAN16Q9H4T2 348 aaPredicted RBP12.23□□□□□ -0.45
NUP188-201ENST00000372577 C8orf34Q49A92 452 aa12.23□□□□□ -0.45
NUP188-201ENST00000372577 BICDL1Q6ZP65 573 aa12.23□□□□□ -0.45
NUP188-201ENST00000372577 TMOD2Q9NZR1 351 aa12.23□□□□□ -0.45
NUP188-201ENST00000372577 IL15P40933 162 aaPredicted RBP12.23□□□□□ -0.45
NUP188-201ENST00000372577 DZIP1Q86YF9 867 aaKnown RBP12.23□□□□□ -0.45
NUP188-201ENST00000372577 PYM1Q9BRP8 204 aaKnown RBP12.23□□□□□ -0.45
NUP188-201ENST00000372577 BRPF1P55201 1214 aaPredicted RBP12.22□□□□□ -0.45
NUP188-201ENST00000372577 SSRP1Q08945 709 aaKnown RBP12.22□□□□□ -0.45
NUP188-201ENST00000372577 SEC63Q9UGP8 760 aaKnown RBP12.22□□□□□ -0.45
NUP188-201ENST00000372577 BAG4O95429 457 aaKnown RBP12.22□□□□□ -0.45
NUP188-201ENST00000372577 LDHCP07864 332 aa12.22□□□□□ -0.45
NUP188-201ENST00000372577 UVSSAQ2YD98 709 aa12.22□□□□□ -0.45
NUP188-201ENST00000372577 CEP85Q6P2H3 762 aa12.22□□□□□ -0.45
NUP188-201ENST00000372577 FERMT3Q86UX7 667 aa12.22□□□□□ -0.45
NUP188-201ENST00000372577 GOLIM4O00461 696 aa12.22□□□□□ -0.45
NUP188-201ENST00000372577 GJB2P29033 226 aa12.22□□□□□ -0.45
NUP188-201ENST00000372577 SYCP1Q15431 976 aa12.22□□□□□ -0.45
NUP188-201ENST00000372577 NCOA7Q8NI08 942 aa12.22□□□□□ -0.45
NUP188-201ENST00000372577 HOXC9P31274 260 aa12.22□□□□□ -0.45
NUP188-201ENST00000372577 SPTY2D1Q68D10 685 aaPredicted RBP12.22□□□□□ -0.45
NUP188-201ENST00000372577 GOLGA8BA8MQT2 603 aa12.22□□□□□ -0.45
NUP188-201ENST00000372577 FBLN1P23142 703 aa12.22□□□□□ -0.45
NUP188-201ENST00000372577 PIP4K2BP78356 416 aa12.22□□□□□ -0.45
NUP188-201ENST00000372577 STK11IPQ8N1F8 1099 aa12.22□□□□□ -0.45
NUP188-201ENST00000372577 XAGE3Q8WTP9 111 aa12.22□□□□□ -0.45
NUP188-201ENST00000372577 MKNK2Q9HBH9 465 aa12.22□□□□□ -0.45
NUP188-201ENST00000372577 GOLGA8AA7E2F4 631 aa12.21□□□□□ -0.45
NUP188-201ENST00000372577 NEMFO60524 1076 aa12.21□□□□□ -0.45
NUP188-201ENST00000372577 UBE2HP62256 183 aa12.21□□□□□ -0.45
NUP188-201ENST00000372577 EYA1Q99502 592 aa12.21□□□□□ -0.45
NUP188-201ENST00000372577 POLR3DP05423 398 aaPredicted RBP12.21□□□□□ -0.45
NUP188-201ENST00000372577 IL13P35225 146 aa12.21□□□□□ -0.45
NUP188-201ENST00000372577 RAD50Q92878 1312 aa12.21□□□□□ -0.45
NUP188-201ENST00000372577 ZFYVE16Q7Z3T8 1539 aa12.21□□□□□ -0.45
NUP188-201ENST00000372577 DCAF5Q96JK2 942 aa12.21□□□□□ -0.46
NUP188-201ENST00000372577 MINDY4BA8MYZ0 360 aa12.21□□□□□ -0.46
NUP188-201ENST00000372577 IFIT3O14879 490 aaKnown RBP12.21□□□□□ -0.46
NUP188-201ENST00000372577 MCM5P33992 734 aa12.21□□□□□ -0.46
NUP188-201ENST00000372577 RBM5P52756 815 aaKnown RBP eCLIP12.21□□□□□ -0.46
NUP188-201ENST00000372577 CATIPQ7Z7H3 387 aa12.21□□□□□ -0.46
NUP188-201ENST00000372577 SPINK5Q9NQ38 1064 aaPredicted RBP12.21□□□□□ -0.46
NUP188-201ENST00000372577 RNF123Q5XPI4 1314 aa12.21□□□□□ -0.46
NUP188-201ENST00000372577 KIF24Q5T7B8 1368 aa12.21□□□□□ -0.46
NUP188-201ENST00000372577 CCDC152Q4G0S7 254 aa12.2□□□□□ -0.46
NUP188-201ENST00000372577 MYOM2P54296 1465 aa12.2□□□□□ -0.46
NUP188-201ENST00000372577 MAP3K19Q56UN5 1328 aa12.2□□□□□ -0.46
NUP188-201ENST00000372577 IQCEQ6IPM2 695 aa12.2□□□□□ -0.46
NUP188-201ENST00000372577 COPS6Q7L5N1 327 aa12.2□□□□□ -0.46
NUP188-201ENST00000372577 SMARCC1Q92922 1105 aaPredicted RBP12.2□□□□□ -0.46
NUP188-201ENST00000372577 RAB34Q9BZG1 259 aa12.2□□□□□ -0.46
NUP188-201ENST00000372577 ATP5J2-PTCD1G3V325 749 aa12.2□□□□□ -0.46
NUP188-201ENST00000372577 TMX3Q96JJ7 454 aa12.2□□□□□ -0.46
NUP188-201ENST00000372577 DEF6Q9H4E7 631 aa12.2□□□□□ -0.46
NUP188-201ENST00000372577 ZRANB1Q9UGI0 708 aa12.2□□□□□ -0.46
NUP188-201ENST00000372577 ZNF444Q8N0Y2 327 aaPredicted RBP12.2□□□□□ -0.46
NUP188-201ENST00000372577 CCDC12Q8WUD4 166 aaPredicted RBP12.2□□□□□ -0.46
NUP188-201ENST00000372577 ERLIN1O75477 346 aa12.19□□□□□ -0.46
NUP188-201ENST00000372577 CCDC178Q5BJE1 867 aa12.19□□□□□ -0.46
NUP188-201ENST00000372577 PHACTR3Q96KR7 559 aa12.19□□□□□ -0.46
NUP188-201ENST00000372577 ANKIB1Q9P2G1 1089 aa12.19□□□□□ -0.46
NUP188-201ENST00000372577 SAMD9LQ8IVG5 1584 aa12.19□□□□□ -0.46
NUP188-201ENST00000372577 RLBP1P12271 317 aa12.19□□□□□ -0.46
NUP188-201ENST00000372577 KIF5BP33176 963 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms