RNA–Protein interactions for RNA: ENST00000372443.6

KCNMA1-209, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 5,059 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-209ENST00000372443 ACEP12821 1306 aa24.27■■□□□ 1.48
KCNMA1-209ENST00000372443 KIF2AO00139 706 aaPredicted RBP24.27■■□□□ 1.48
KCNMA1-209ENST00000372443 SMC5Q8IY18 1101 aa24.27■■□□□ 1.48
KCNMA1-209ENST00000372443 ZBTB40Q9NUA8 1239 aa24.27■■□□□ 1.48
KCNMA1-209ENST00000372443 AKAP2Q9Y2D5 859 aa24.27■■□□□ 1.48
KCNMA1-209ENST00000372443 ESYT1Q9BSJ8 1104 aa24.27■■□□□ 1.48
KCNMA1-209ENST00000372443 EIF3JO75822 258 aaKnown RBP24.27■■□□□ 1.48
KCNMA1-209ENST00000372443 SSBP05455 408 aaKnown RBP eCLIP24.27■■□□□ 1.48
KCNMA1-209ENST00000372443 SOGA3Q5TF21 947 aa24.26■■□□□ 1.47
KCNMA1-209ENST00000372443 TMCO3Q6UWJ1 677 aa24.26■■□□□ 1.47
KCNMA1-209ENST00000372443 MINDY4BA8MYZ0 360 aa24.26■■□□□ 1.47
KCNMA1-209ENST00000372443 GOLIM4O00461 696 aa24.26■■□□□ 1.47
KCNMA1-209ENST00000372443 ZSCAN22P10073 491 aaPredicted RBP24.26■■□□□ 1.47
KCNMA1-209ENST00000372443 CEBPAP49715 358 aaPredicted RBP24.26■■□□□ 1.47
KCNMA1-209ENST00000372443 JARID2Q92833 1246 aaPredicted RBP24.26■■□□□ 1.47
KCNMA1-209ENST00000372443 GOLGA8BA8MQT2 603 aa24.25■■□□□ 1.47
KCNMA1-209ENST00000372443 FAM193AP78312 1265 aa24.25■■□□□ 1.47
KCNMA1-209ENST00000372443 CNPY2Q9Y2B0 182 aa24.25■■□□□ 1.47
KCNMA1-209ENST00000372443 CTAGE5O15320 804 aa24.25■■□□□ 1.47
KCNMA1-209ENST00000372443 VAMP4O75379 141 aa24.25■■□□□ 1.47
KCNMA1-209ENST00000372443 KRT24Q2M2I5 525 aa24.25■■□□□ 1.47
KCNMA1-209ENST00000372443 CCDC102AQ96A19 550 aa24.25■■□□□ 1.47
KCNMA1-209ENST00000372443 NAPBQ9H115 298 aa24.25■■□□□ 1.47
KCNMA1-209ENST00000372443 SNRKQ9NRH2 765 aa24.25■■□□□ 1.47
KCNMA1-209ENST00000372443 ATP5J2-PTCD1G3V325 749 aa24.25■■□□□ 1.47
KCNMA1-209ENST00000372443 TOP1P11387 765 aaKnown RBP24.25■■□□□ 1.47
KCNMA1-209ENST00000372443 EIF5P55010 431 aaKnown RBP24.25■■□□□ 1.47
KCNMA1-209ENST00000372443 PIK3R4Q99570 1358 aa24.24■■□□□ 1.47
KCNMA1-209ENST00000372443 CADPS2Q86UW7 1296 aa24.24■■□□□ 1.47
KCNMA1-209ENST00000372443 POLKQ9UBT6 870 aa24.24■■□□□ 1.47
KCNMA1-209ENST00000372443 ZNF213O14771 459 aa24.24■■□□□ 1.47
KCNMA1-209ENST00000372443 UBE3BQ7Z3V4 1068 aa24.24■■□□□ 1.47
KCNMA1-209ENST00000372443 PRIM1P49642 420 aaKnown RBP24.24■■□□□ 1.47
KCNMA1-209ENST00000372443 ZRANB1Q9UGI0 708 aa24.24■■□□□ 1.47
KCNMA1-209ENST00000372443 ATP7AQ04656 1500 aa24.24■■□□□ 1.47
KCNMA1-209ENST00000372443 PUS7Q96PZ0 661 aaKnown RBP24.24■■□□□ 1.47
KCNMA1-209ENST00000372443 USP48Q86UV5 1035 aa24.23■■□□□ 1.47
KCNMA1-209ENST00000372443 ZGPATQ8N5A5 531 aaKnown RBP24.23■■□□□ 1.47
KCNMA1-209ENST00000372443 NEK1Q96PY6 1258 aa24.23■■□□□ 1.47
KCNMA1-209ENST00000372443 HAND2P61296 217 aa24.23■■□□□ 1.47
KCNMA1-209ENST00000372443 RAB3GAP1Q15042 981 aa24.23■■□□□ 1.47
KCNMA1-209ENST00000372443 RAB11FIP4Q86YS3 637 aa24.23■■□□□ 1.47
KCNMA1-209ENST00000372443 LUC7LQ9NQ29 371 aaKnown RBP24.22■■□□□ 1.47
KCNMA1-209ENST00000372443 POLR3DP05423 398 aaPredicted RBP24.22■■□□□ 1.47
KCNMA1-209ENST00000372443 STARD3NLO95772 234 aa24.22■■□□□ 1.47
KCNMA1-209ENST00000372443 IFIT5Q13325 482 aaKnown RBP24.22■■□□□ 1.47
KCNMA1-209ENST00000372443 ZBTB3Q9H5J0 574 aa24.22■■□□□ 1.47
KCNMA1-209ENST00000372443 IGHMBP2P38935 993 aaKnown RBP24.22■■□□□ 1.47
KCNMA1-209ENST00000372443 PHACTR3Q96KR7 559 aa24.22■■□□□ 1.47
KCNMA1-209ENST00000372443 ABCA8O94911 1581 aa24.21■■□□□ 1.47
KCNMA1-209ENST00000372443 ZSCAN12O43309 604 aa24.21■■□□□ 1.47
KCNMA1-209ENST00000372443 UVSSAQ2YD98 709 aa24.21■■□□□ 1.47
KCNMA1-209ENST00000372443 CEP131Q9UPN4 1083 aa24.21■■□□□ 1.47
KCNMA1-209ENST00000372443 ISM2Q6H9L7 571 aa24.21■■□□□ 1.47
KCNMA1-209ENST00000372443 DCTPP1Q9H773 170 aa24.21■■□□□ 1.47
KCNMA1-209ENST00000372443 CENPHQ9H3R5 247 aa24.21■■□□□ 1.47
KCNMA1-209ENST00000372443 RIMS2Q9UQ26 1411 aa24.21■■□□□ 1.47
KCNMA1-209ENST00000372443 BRF1Q92994 677 aa24.21■■□□□ 1.47
KCNMA1-209ENST00000372443 EIF2AK4Q9P2K8 1649 aaKnown RBP24.2■■□□□ 1.47
KCNMA1-209ENST00000372443 BICDL1Q6ZP65 573 aa24.2■■□□□ 1.47
KCNMA1-209ENST00000372443 PIK3C2GO75747 1445 aa24.2■■□□□ 1.47
KCNMA1-209ENST00000372443 KIAA1328Q86T90 577 aa24.2■■□□□ 1.46
KCNMA1-209ENST00000372443 USP16Q9Y5T5 823 aa24.2■■□□□ 1.46
KCNMA1-209ENST00000372443 CNNM3Q8NE01 707 aa24.2■■□□□ 1.46
KCNMA1-209ENST00000372443 LRRC2Q9BYS8 371 aa24.2■■□□□ 1.46
KCNMA1-209ENST00000372443 TMC6Q7Z403 805 aa24.2■■□□□ 1.46
KCNMA1-209ENST00000372443 MYO6Q9UM54 1294 aa24.2■■□□□ 1.46
KCNMA1-209ENST00000372443 CPLX3Q8WVH0 158 aa24.19■■□□□ 1.46
KCNMA1-209ENST00000372443 CHPF2Q9P2E5 772 aa24.19■■□□□ 1.46
KCNMA1-209ENST00000372443 DDX46Q7L014 1031 aaKnown RBP24.19■■□□□ 1.46
KCNMA1-209ENST00000372443 STX1AQ16623 288 aa24.19■■□□□ 1.46
KCNMA1-209ENST00000372443 ORC3Q9UBD5 711 aaPredicted RBP24.19■■□□□ 1.46
KCNMA1-209ENST00000372443 ANAPC15P60006 121 aa24.18■■□□□ 1.46
KCNMA1-209ENST00000372443 KIF4BQ2VIQ3 1234 aa24.18■■□□□ 1.46
KCNMA1-209ENST00000372443 PLEKHM2Q8IWE5 1019 aa24.18■■□□□ 1.46
KCNMA1-209ENST00000372443 TMX1Q9H3N1 280 aa24.18■■□□□ 1.46
KCNMA1-209ENST00000372443 CEP85Q6P2H3 762 aa24.18■■□□□ 1.46
KCNMA1-209ENST00000372443 TTC12Q9H892 705 aaPredicted RBP24.18■■□□□ 1.46
KCNMA1-209ENST00000372443 SLC12A7Q9Y666 1083 aa24.18■■□□□ 1.46
KCNMA1-209ENST00000372443 ATP8B2P98198 1209 aa24.17■■□□□ 1.46
KCNMA1-209ENST00000372443 PPP4R3BQ5MIZ7 849 aa24.17■■□□□ 1.46
KCNMA1-209ENST00000372443 RBM8AQ9Y5S9 174 aaKnown RBP24.17■■□□□ 1.46
KCNMA1-209ENST00000372443 GOLGA6L10A6NI86 522 aa24.17■■□□□ 1.46
KCNMA1-209ENST00000372443 IFIT3O14879 490 aaKnown RBP24.17■■□□□ 1.46
KCNMA1-209ENST00000372443 DNM1Q05193 864 aaKnown RBP24.17■■□□□ 1.46
KCNMA1-209ENST00000372443 CCDC144CPQ8IYA2 1237 aa24.17■■□□□ 1.46
KCNMA1-209ENST00000372443 SYCP1Q15431 976 aa24.17■■□□□ 1.46
KCNMA1-209ENST00000372443 CCDC196A0A1B0GTZ2 297 aa24.16■■□□□ 1.46
KCNMA1-209ENST00000372443 SPDYE4A6NLX3 237 aa24.16■■□□□ 1.46
KCNMA1-209ENST00000372443 DYNC1I1O14576 645 aa24.16■■□□□ 1.46
KCNMA1-209ENST00000372443 EIF4A2Q14240 407 aaKnown RBP24.16■■□□□ 1.46
KCNMA1-209ENST00000372443 GOLGA8AA7E2F4 631 aa24.16■■□□□ 1.46
KCNMA1-209ENST00000372443 NEMFO60524 1076 aa24.16■■□□□ 1.46
KCNMA1-209ENST00000372443 BMP2KQ9NSY1 1161 aaPredicted RBP24.16■■□□□ 1.46
KCNMA1-209ENST00000372443 ZKSCAN5Q9Y2L8 839 aa24.15■■□□□ 1.46
KCNMA1-209ENST00000372443 KDM2BQ8NHM5 1336 aa24.15■■□□□ 1.46
KCNMA1-209ENST00000372443 ARHGEF5Q12774 1597 aa24.15■■□□□ 1.46
KCNMA1-209ENST00000372443 HMG20BQ9P0W2 317 aa24.15■■□□□ 1.46
KCNMA1-209ENST00000372443 MAP3K12Q12852 859 aa24.15■■□□□ 1.46
KCNMA1-209ENST00000372443 NOLC1Q14978 699 aaKnown RBP eCLIP24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms