RNA–Protein interactions for RNA: ENST00000372417.1

YIPF3-201, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 406 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-201ENST00000372417 EMILIN1Q9Y6C2 1016 aa11.09□□□□□ -0.63
YIPF3-201ENST00000372417 DLL1O00548 723 aa11.08□□□□□ -0.64
YIPF3-201ENST00000372417 LMOD1P29536 600 aaPredicted RBP11.08□□□□□ -0.64
YIPF3-201ENST00000372417 CCDC93Q567U6 631 aa11.08□□□□□ -0.64
YIPF3-201ENST00000372417 STYK1Q6J9G0 422 aa11.08□□□□□ -0.64
YIPF3-201ENST00000372417 SAPCD2Q86UD0 394 aa11.08□□□□□ -0.64
YIPF3-201ENST00000372417 CUL9Q8IWT3 2517 aa11.08□□□□□ -0.64
YIPF3-201ENST00000372417 MKI67P46013 3256 aaKnown RBP11.08□□□□□ -0.64
YIPF3-201ENST00000372417 FKBP4Q02790 459 aaKnown RBP eCLIP11.07□□□□□ -0.64
YIPF3-201ENST00000372417 DNAJC10Q8IXB1 793 aa11.07□□□□□ -0.64
YIPF3-201ENST00000372417 ZNF277Q9NRM2 450 aaPredicted RBP11.07□□□□□ -0.64
YIPF3-201ENST00000372417 RBBP6Q7Z6E9 1792 aaKnown RBP11.07□□□□□ -0.64
YIPF3-201ENST00000372417 UBR2Q8IWV8 1755 aa11.07□□□□□ -0.64
YIPF3-201ENST00000372417 SZT2Q5T011 3432 aa11.06□□□□□ -0.64
YIPF3-201ENST00000372417 FZD9O00144 591 aa11.06□□□□□ -0.64
YIPF3-201ENST00000372417 PPM1GO15355 546 aaPredicted RBP11.06□□□□□ -0.64
YIPF3-201ENST00000372417 CELF2O95319 508 aaKnown RBP11.06□□□□□ -0.64
YIPF3-201ENST00000372417 FXR1P51114 621 aaKnown RBP eCLIP11.06□□□□□ -0.64
YIPF3-201ENST00000372417 PRR5LQ6MZQ0 368 aa11.06□□□□□ -0.64
YIPF3-201ENST00000372417 CCDC24Q8N4L8 307 aa11.06□□□□□ -0.64
YIPF3-201ENST00000372417 NOGQ13253 232 aa11.05□□□□□ -0.64
YIPF3-201ENST00000372417 CTU1Q7Z7A3 348 aaKnown RBP11.05□□□□□ -0.64
YIPF3-201ENST00000372417 MASTLQ96GX5 879 aa11.05□□□□□ -0.64
YIPF3-201ENST00000372417 SAGE1Q9NXZ1 904 aa11.05□□□□□ -0.64
YIPF3-201ENST00000372417 ZBTB1Q9Y2K1 713 aa11.05□□□□□ -0.64
YIPF3-201ENST00000372417 NPHP1O15259 732 aa11.04□□□□□ -0.64
YIPF3-201ENST00000372417 SRGNP10124 158 aa11.04□□□□□ -0.64
YIPF3-201ENST00000372417 CYP19A1P11511 503 aaPredicted RBP11.04□□□□□ -0.64
YIPF3-201ENST00000372417 IARSP41252 1262 aaKnown RBP11.04□□□□□ -0.64
YIPF3-201ENST00000372417 ZNF530Q6P9A1 599 aaPredicted RBP11.04□□□□□ -0.64
YIPF3-201ENST00000372417 USP50Q70EL3 339 aaPredicted RBP11.04□□□□□ -0.64
YIPF3-201ENST00000372417 NFATC2IPQ8NCF5 419 aa11.04□□□□□ -0.64
YIPF3-201ENST00000372417 CARD11Q9BXL7 1154 aa11.04□□□□□ -0.64
YIPF3-201ENST00000372417 HPS5Q9UPZ3 1129 aa11.04□□□□□ -0.64
YIPF3-201ENST00000372417 GJA3Q9Y6H8 435 aa11.04□□□□□ -0.64
YIPF3-201ENST00000372417 WASHC2AQ641Q2 1341 aa11.04□□□□□ -0.64
YIPF3-201ENST00000372417 PAPPA2Q9BXP8 1791 aa11.03□□□□□ -0.64
YIPF3-201ENST00000372417 ST20-MTHFSA0A0A6YYL1 179 aa11.03□□□□□ -0.64
YIPF3-201ENST00000372417 MTHFSP49914 203 aa11.03□□□□□ -0.64
YIPF3-201ENST00000372417 EIF6P56537 245 aaKnown RBP11.03□□□□□ -0.64
YIPF3-201ENST00000372417 ST5P78524 1137 aa11.03□□□□□ -0.64
YIPF3-201ENST00000372417 PLEKHO1Q53GL0 409 aaPredicted RBP11.03□□□□□ -0.64
YIPF3-201ENST00000372417 TBC1D9BQ66K14 1250 aa11.03□□□□□ -0.64
YIPF3-201ENST00000372417 CNBD1Q8NA66 436 aa11.03□□□□□ -0.64
YIPF3-201ENST00000372417 C7orf43Q8WVR3 580 aa11.03□□□□□ -0.64
YIPF3-201ENST00000372417 ZIC5Q96T25 663 aa11.03□□□□□ -0.64
YIPF3-201ENST00000372417 A0A0C4DFX4 3053 aa11.03□□□□□ -0.64
YIPF3-201ENST00000372417 TRIOBPQ9H2D6 2365 aa11.02□□□□□ -0.65
YIPF3-201ENST00000372417 EPS15P42566 896 aa11.02□□□□□ -0.65
YIPF3-201ENST00000372417 AKAP4Q5JQC9 854 aa11.02□□□□□ -0.65
YIPF3-201ENST00000372417 RTKN2Q8IZC4 609 aa11.02□□□□□ -0.65
YIPF3-201ENST00000372417 JDP2Q8WYK2 163 aa11.02□□□□□ -0.65
YIPF3-201ENST00000372417 COL4A5P29400 1685 aa11.01□□□□□ -0.65
YIPF3-201ENST00000372417 CEP290O15078 2479 aa11.01□□□□□ -0.65
YIPF3-201ENST00000372417 A0A087WZG4 1122 aa11.01□□□□□ -0.65
YIPF3-201ENST00000372417 SCNN1DP51172 638 aa11.01□□□□□ -0.65
YIPF3-201ENST00000372417 C1orf141Q5JVX7 400 aa11.01□□□□□ -0.65
YIPF3-201ENST00000372417 ZNF408Q9H9D4 720 aa11.01□□□□□ -0.65
YIPF3-201ENST00000372417 TRPA1O75762 1119 aa11□□□□□ -0.65
YIPF3-201ENST00000372417 CANXP27824 592 aaKnown RBP11□□□□□ -0.65
YIPF3-201ENST00000372417 AMOTQ4VCS5 1084 aa11□□□□□ -0.65
YIPF3-201ENST00000372417 SYNE4Q8N205 404 aa11□□□□□ -0.65
YIPF3-201ENST00000372417 KIAA0100Q14667 2235 aaKnown RBP10.99□□□□□ -0.65
YIPF3-201ENST00000372417 PKN2Q16513 984 aaKnown RBP10.99□□□□□ -0.65
YIPF3-201ENST00000372417 OLFM4Q6UX06 510 aa10.99□□□□□ -0.65
YIPF3-201ENST00000372417 GLIS2Q9BZE0 524 aaPredicted RBP10.99□□□□□ -0.65
YIPF3-201ENST00000372417 RNF186Q9NXI6 227 aa10.99□□□□□ -0.65
YIPF3-201ENST00000372417 MRC1P22897 1456 aa10.99□□□□□ -0.65
YIPF3-201ENST00000372417 COL6A3P12111 3177 aa10.98□□□□□ -0.65
YIPF3-201ENST00000372417 NPR1P16066 1061 aa10.98□□□□□ -0.65
YIPF3-201ENST00000372417 HUNKP57058 714 aa10.98□□□□□ -0.65
YIPF3-201ENST00000372417 EIF4A2Q14240 407 aaKnown RBP10.98□□□□□ -0.65
YIPF3-201ENST00000372417 SLC17A8Q8NDX2 589 aa10.98□□□□□ -0.65
YIPF3-201ENST00000372417 SETDB2Q96T68 719 aa10.98□□□□□ -0.65
YIPF3-201ENST00000372417 ADARB2Q9NS39 739 aaKnown RBP10.98□□□□□ -0.65
YIPF3-201ENST00000372417 CENPFP49454 3210 aa10.97□□□□□ -0.65
YIPF3-201ENST00000372417 EIF5P55010 431 aaKnown RBP10.97□□□□□ -0.65
YIPF3-201ENST00000372417 SNED1Q8TER0 1413 aa10.96□□□□□ -0.65
YIPF3-201ENST00000372417 FAM155AB1AL88 458 aaPredicted RBP10.96□□□□□ -0.65
YIPF3-201ENST00000372417 KIF23Q02241 960 aaPredicted RBP10.96□□□□□ -0.65
YIPF3-201ENST00000372417 RGMBQ6NW40 437 aa10.96□□□□□ -0.65
YIPF3-201ENST00000372417 TESK2Q96S53 571 aa10.96□□□□□ -0.65
YIPF3-201ENST00000372417 PSMD1Q99460 953 aa10.96□□□□□ -0.65
YIPF3-201ENST00000372417 SLC24A1O60721 1099 aa10.95□□□□□ -0.66
YIPF3-201ENST00000372417 SLC39A6Q13433 755 aa10.95□□□□□ -0.66
YIPF3-201ENST00000372417 VSIG10Q8N0Z9 540 aa10.95□□□□□ -0.66
YIPF3-201ENST00000372417 CCDC102AQ96A19 550 aa10.95□□□□□ -0.66
YIPF3-201ENST00000372417 SLC52A2Q9HAB3 445 aa10.95□□□□□ -0.66
YIPF3-201ENST00000372417 GPRC5DQ9NZD1 345 aa10.95□□□□□ -0.66
YIPF3-201ENST00000372417 HDAC9Q9UKV0 1011 aa10.95□□□□□ -0.66
YIPF3-201ENST00000372417 TBC1D2BQ9UPU7 963 aa10.95□□□□□ -0.66
YIPF3-201ENST00000372417 LARGE2Q8N3Y3 721 aa10.94□□□□□ -0.66
YIPF3-201ENST00000372417 ZNF330Q9Y3S2 320 aaPredicted RBP10.94□□□□□ -0.66
YIPF3-201ENST00000372417 SIPA1L3O60292 1781 aaPredicted RBP10.94□□□□□ -0.66
YIPF3-201ENST00000372417 HTTP42858 3142 aa10.94□□□□□ -0.66
YIPF3-201ENST00000372417 BRCA2P51587 3418 aa10.93□□□□□ -0.66
YIPF3-201ENST00000372417 STARD3NLO95772 234 aa10.93□□□□□ -0.66
YIPF3-201ENST00000372417 ALDH1B1P30837 517 aa10.93□□□□□ -0.66
YIPF3-201ENST00000372417 CDC37L1Q7L3B6 337 aa10.93□□□□□ -0.66
YIPF3-201ENST00000372417 NBPF5PQ86XG9 351 aaPredicted RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms