RNA–Protein interactions for RNA: ENST00000372409.7

PCIF1-201, Transcript of PDX1 C-terminal inhibiting factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCIF1, Length 2,747 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCIF1-201ENST00000372409 GPATCH3Q96I76 525 aa20.13■□□□□ 0.81
PCIF1-201ENST00000372409 TSPY26PQ9H489 355 aa20.13■□□□□ 0.81
PCIF1-201ENST00000372409 ECHDC1Q9NTX5 307 aa20.13■□□□□ 0.81
PCIF1-201ENST00000372409 DTNBO60941 627 aa20.12■□□□□ 0.81
PCIF1-201ENST00000372409 KSR2Q6VAB6 950 aa20.12■□□□□ 0.81
PCIF1-201ENST00000372409 RPAP1Q9BWH6 1393 aaPredicted RBP20.12■□□□□ 0.81
PCIF1-201ENST00000372409 PXDNQ92626 1479 aa20.12■□□□□ 0.81
PCIF1-201ENST00000372409 AACSQ86V21 672 aa20.12■□□□□ 0.81
PCIF1-201ENST00000372409 ANKRD24Q8TF21 1146 aa20.12■□□□□ 0.81
PCIF1-201ENST00000372409 PTH1RQ03431 593 aa20.11■□□□□ 0.81
PCIF1-201ENST00000372409 ORAI2Q96SN7 254 aa20.11■□□□□ 0.81
PCIF1-201ENST00000372409 SMC3Q9UQE7 1217 aa20.11■□□□□ 0.81
PCIF1-201ENST00000372409 ALDH1L1O75891 902 aa20.11■□□□□ 0.81
PCIF1-201ENST00000372409 TRHP20396 242 aaPredicted RBP20.11■□□□□ 0.81
PCIF1-201ENST00000372409 PRPF40BQ6NWY9 871 aaKnown RBP20.11■□□□□ 0.81
PCIF1-201ENST00000372409 JAKMIP1Q96N16 626 aaKnown RBP20.11■□□□□ 0.81
PCIF1-201ENST00000372409 CNPY2Q9Y2B0 182 aa20.11■□□□□ 0.81
PCIF1-201ENST00000372409 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.11■□□□□ 0.81
PCIF1-201ENST00000372409 MTX1Q13505 466 aa20.11■□□□□ 0.81
PCIF1-201ENST00000372409 DDX54Q8TDD1 881 aaKnown RBP20.11■□□□□ 0.81
PCIF1-201ENST00000372409 TCHHQ07283 1943 aa20.1■□□□□ 0.81
PCIF1-201ENST00000372409 USP42Q9H9J4 1324 aaKnown RBP20.1■□□□□ 0.81
PCIF1-201ENST00000372409 LMO7Q8WWI1 1683 aa20.1■□□□□ 0.81
PCIF1-201ENST00000372409 HS1BP3Q53T59 392 aa20.1■□□□□ 0.81
PCIF1-201ENST00000372409 ZSCAN22P10073 491 aaPredicted RBP20.1■□□□□ 0.81
PCIF1-201ENST00000372409 ERC1Q8IUD2 1116 aa20.1■□□□□ 0.81
PCIF1-201ENST00000372409 STX6O43752 255 aa20.09■□□□□ 0.81
PCIF1-201ENST00000372409 SYT1P21579 422 aa20.09■□□□□ 0.81
PCIF1-201ENST00000372409 CCDC83Q8IWF9 413 aa20.09■□□□□ 0.81
PCIF1-201ENST00000372409 PHF14O94880 888 aa20.09■□□□□ 0.81
PCIF1-201ENST00000372409 LARGE1O95461 756 aa20.09■□□□□ 0.81
PCIF1-201ENST00000372409 KCNJ4P48050 445 aa20.09■□□□□ 0.81
PCIF1-201ENST00000372409 ADCK5Q3MIX3 580 aa20.09■□□□□ 0.81
PCIF1-201ENST00000372409 ARHGEF25Q86VW2 580 aa20.09■□□□□ 0.81
PCIF1-201ENST00000372409 NOL7Q9UMY1 257 aaKnown RBP20.09■□□□□ 0.81
PCIF1-201ENST00000372409 CHD2O14647 1828 aaKnown RBP20.08■□□□□ 0.81
PCIF1-201ENST00000372409 SUCLG2Q96I99 432 aa20.08■□□□□ 0.8
PCIF1-201ENST00000372409 CCDC8Q9H0W5 538 aaPredicted RBP20.08■□□□□ 0.8
PCIF1-201ENST00000372409 SIL1Q9H173 461 aa20.08■□□□□ 0.8
PCIF1-201ENST00000372409 PDRG1Q9NUG6 133 aa20.08■□□□□ 0.8
PCIF1-201ENST00000372409 HDAC5Q9UQL6 1122 aa20.08■□□□□ 0.8
PCIF1-201ENST00000372409 GRM8O00222 908 aa20.07■□□□□ 0.8
PCIF1-201ENST00000372409 G3BP1Q13283 466 aaKnown RBP eCLIP20.07■□□□□ 0.8
PCIF1-201ENST00000372409 BICC1Q9H694 974 aaKnown RBP20.07■□□□□ 0.8
PCIF1-201ENST00000372409 HYPKQ9NX55 129 aa20.07■□□□□ 0.8
PCIF1-201ENST00000372409 FIBPO43427 364 aa20.07■□□□□ 0.8
PCIF1-201ENST00000372409 EVI5LQ96CN4 794 aa20.07■□□□□ 0.8
PCIF1-201ENST00000372409 DDX58O95786 925 aaKnown RBP20.06■□□□□ 0.8
PCIF1-201ENST00000372409 PTMAP06454 111 aaKnown RBP20.06■□□□□ 0.8
PCIF1-201ENST00000372409 CYP46A1Q9Y6A2 500 aa20.06■□□□□ 0.8
PCIF1-201ENST00000372409 ADGRL3Q9HAR2 1447 aa20.06■□□□□ 0.8
PCIF1-201ENST00000372409 OFD1O75665 1012 aa20.06■□□□□ 0.8
PCIF1-201ENST00000372409 LINS1Q8NG48 757 aa20.06■□□□□ 0.8
PCIF1-201ENST00000372409 AXIN2Q9Y2T1 843 aa20.06■□□□□ 0.8
PCIF1-201ENST00000372409 PRKCSHP14314 528 aaPredicted RBP20.05■□□□□ 0.8
PCIF1-201ENST00000372409 GJB2P29033 226 aa20.05■□□□□ 0.8
PCIF1-201ENST00000372409 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.05■□□□□ 0.8
PCIF1-201ENST00000372409 RIC3Q7Z5B4 369 aa20.05■□□□□ 0.8
PCIF1-201ENST00000372409 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.05■□□□□ 0.8
PCIF1-201ENST00000372409 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.05■□□□□ 0.8
PCIF1-201ENST00000372409 F13A1P00488 732 aa20.05■□□□□ 0.8
PCIF1-201ENST00000372409 FAM227BQ96M60 508 aa20.05■□□□□ 0.8
PCIF1-201ENST00000372409 CCDC39Q9UFE4 941 aa20.05■□□□□ 0.8
PCIF1-201ENST00000372409 NCAPD2Q15021 1401 aa20.05■□□□□ 0.8
PCIF1-201ENST00000372409 MYL6BP14649 208 aa20.04■□□□□ 0.8
PCIF1-201ENST00000372409 ZKSCAN1P17029 563 aaPredicted RBP20.04■□□□□ 0.8
PCIF1-201ENST00000372409 SLC39A6Q13433 755 aa20.04■□□□□ 0.8
PCIF1-201ENST00000372409 ZKSCAN5Q9Y2L8 839 aa20.04■□□□□ 0.8
PCIF1-201ENST00000372409 SASH1O94885 1247 aa20.04■□□□□ 0.8
PCIF1-201ENST00000372409 EAF2Q96CJ1 260 aaPredicted RBP20.04■□□□□ 0.8
PCIF1-201ENST00000372409 CCDC171Q6TFL3 1326 aa20.04■□□□□ 0.8
PCIF1-201ENST00000372409 VPS53Q5VIR6 699 aa20.04■□□□□ 0.8
PCIF1-201ENST00000372409 KAZALD1Q96I82 304 aa20.04■□□□□ 0.8
PCIF1-201ENST00000372409 RBM8AQ9Y5S9 174 aaKnown RBP20.04■□□□□ 0.8
PCIF1-201ENST00000372409 TPM2P07951 284 aa20.03■□□□□ 0.8
PCIF1-201ENST00000372409 NMIQ13287 307 aaPredicted RBP20.03■□□□□ 0.8
PCIF1-201ENST00000372409 KLHDC4Q8TBB5 520 aa20.03■□□□□ 0.8
PCIF1-201ENST00000372409 BOLA2Q9H3K6 86 aa20.03■□□□□ 0.8
PCIF1-201ENST00000372409 DDX21Q9NR30 783 aaKnown RBP eCLIP20.03■□□□□ 0.8
PCIF1-201ENST00000372409 TLR7Q9NYK1 1049 aaKnown RBP20.03■□□□□ 0.8
PCIF1-201ENST00000372409 ATP6V1DQ9Y5K8 247 aa20.03■□□□□ 0.8
PCIF1-201ENST00000372409 CRYBG1Q9Y4K1 1723 aa20.03■□□□□ 0.8
PCIF1-201ENST00000372409 VPS37CA5D8V6 355 aaPredicted RBP20.03■□□□□ 0.8
PCIF1-201ENST00000372409 HSP90AA2PQ14568 343 aaPredicted RBP20.03■□□□□ 0.8
PCIF1-201ENST00000372409 CCDC183Q5T5S1 534 aa20.03■□□□□ 0.8
PCIF1-201ENST00000372409 ZC3H6P61129 1189 aaKnown RBP20.02■□□□□ 0.8
PCIF1-201ENST00000372409 NECAB1Q8N987 351 aa20.02■□□□□ 0.8
PCIF1-201ENST00000372409 TMEM87AQ8NBN3 555 aa20.02■□□□□ 0.8
PCIF1-201ENST00000372409 ZSWIM6Q9HCJ5 1215 aa20.02■□□□□ 0.8
PCIF1-201ENST00000372409 FSD1Q9BTV5 496 aa20.02■□□□□ 0.79
PCIF1-201ENST00000372409 R3HCC1Q9Y3T6 440 aaKnown RBP20.02■□□□□ 0.79
PCIF1-201ENST00000372409 UBE2HP62256 183 aa20.01■□□□□ 0.79
PCIF1-201ENST00000372409 NECTIN1Q15223 517 aa20.01■□□□□ 0.79
PCIF1-201ENST00000372409 CREB3L3Q68CJ9 461 aa20.01■□□□□ 0.79
PCIF1-201ENST00000372409 HEG1Q9ULI3 1381 aa20.01■□□□□ 0.79
PCIF1-201ENST00000372409 ZNF500O60304 480 aaPredicted RBP20.01■□□□□ 0.79
PCIF1-201ENST00000372409 ZSCAN31Q96LW9 406 aaPredicted RBP20.01■□□□□ 0.79
PCIF1-201ENST00000372409 DNM1Q05193 864 aaKnown RBP20■□□□□ 0.79
PCIF1-201ENST00000372409 ME3Q16798 604 aa20■□□□□ 0.79
PCIF1-201ENST00000372409 MPNDQ8N594 471 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms