RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 COL11A2P13942 1736 aaPredicted RBP13.42□□□□□ -0.26
COL5A1-202ENST00000371820 TIAM2Q8IVF5 1701 aa13.42□□□□□ -0.26
COL5A1-202ENST00000371820 ZC3H4Q9UPT8 1303 aaKnown RBP13.41□□□□□ -0.26
COL5A1-202ENST00000371820 A1BGP04217 495 aa13.41□□□□□ -0.26
COL5A1-202ENST00000371820 RIPK4P57078 832 aa13.41□□□□□ -0.26
COL5A1-202ENST00000371820 RUNDC1Q96C34 613 aa13.41□□□□□ -0.26
COL5A1-202ENST00000371820 BABAM1Q9NWV8 329 aa13.41□□□□□ -0.26
COL5A1-202ENST00000371820 TMPOP42166 694 aaKnown RBP13.4□□□□□ -0.26
COL5A1-202ENST00000371820 IFFO2Q5TF58 517 aa13.4□□□□□ -0.26
COL5A1-202ENST00000371820 TBC1D9BQ66K14 1250 aa13.4□□□□□ -0.26
COL5A1-202ENST00000371820 BICDL1Q6ZP65 573 aa13.4□□□□□ -0.26
COL5A1-202ENST00000371820 DZIP3Q86Y13 1208 aaKnown RBP13.4□□□□□ -0.26
COL5A1-202ENST00000371820 C2CD5Q86YS7 1000 aa13.4□□□□□ -0.26
COL5A1-202ENST00000371820 TTLL6Q8N841 843 aa13.4□□□□□ -0.26
COL5A1-202ENST00000371820 ZNF652Q9Y2D9 606 aa13.4□□□□□ -0.26
COL5A1-202ENST00000371820 USP16Q9Y5T5 823 aa13.4□□□□□ -0.26
COL5A1-202ENST00000371820 H0YIN7 160 aa13.39□□□□□ -0.27
COL5A1-202ENST00000371820 RGL2O15211 777 aa13.39□□□□□ -0.27
COL5A1-202ENST00000371820 PRELPP51888 382 aa13.39□□□□□ -0.27
COL5A1-202ENST00000371820 CCDC184Q52MB2 194 aa13.39□□□□□ -0.27
COL5A1-202ENST00000371820 ERICH6Q7L0X2 663 aa13.39□□□□□ -0.27
COL5A1-202ENST00000371820 C16orf71Q8IYS4 520 aaPredicted RBP13.39□□□□□ -0.27
COL5A1-202ENST00000371820 PDZRN3Q9UPQ7 1066 aa13.39□□□□□ -0.27
COL5A1-202ENST00000371820 TBC1D2BQ9UPU7 963 aa13.39□□□□□ -0.27
COL5A1-202ENST00000371820 LMNB1P20700 586 aa13.38□□□□□ -0.27
COL5A1-202ENST00000371820 FSTL1Q12841 308 aa13.38□□□□□ -0.27
COL5A1-202ENST00000371820 PRR5LQ6MZQ0 368 aa13.38□□□□□ -0.27
COL5A1-202ENST00000371820 CLEC4GQ6UXB4 293 aa13.38□□□□□ -0.27
COL5A1-202ENST00000371820 DNAJC5GQ8N7S2 189 aa13.38□□□□□ -0.27
COL5A1-202ENST00000371820 MIS18AQ9NYP9 233 aa13.38□□□□□ -0.27
COL5A1-202ENST00000371820 TSPYL4Q9UJ04 414 aa13.38□□□□□ -0.27
COL5A1-202ENST00000371820 PRAMEF22A3QJZ6 481 aa13.37□□□□□ -0.27
COL5A1-202ENST00000371820 NFKBIEO00221 500 aa13.37□□□□□ -0.27
COL5A1-202ENST00000371820 NPHP1O15259 732 aa13.37□□□□□ -0.27
COL5A1-202ENST00000371820 CAMTA2O94983 1202 aa13.37□□□□□ -0.27
COL5A1-202ENST00000371820 EIF4A1P60842 406 aaKnown RBP13.37□□□□□ -0.27
COL5A1-202ENST00000371820 CCDC146Q8IYE0 955 aa13.37□□□□□ -0.27
COL5A1-202ENST00000371820 SETDB2Q96T68 719 aa13.37□□□□□ -0.27
COL5A1-202ENST00000371820 THUMPD2Q9BTF0 503 aaKnown RBP13.37□□□□□ -0.27
COL5A1-202ENST00000371820 BRIP1Q9BX63 1249 aa13.37□□□□□ -0.27
COL5A1-202ENST00000371820 RRAGCQ9HB90 399 aa13.37□□□□□ -0.27
COL5A1-202ENST00000371820 ERBB4Q15303 1308 aa13.37□□□□□ -0.27
COL5A1-202ENST00000371820 FER1L6Q2WGJ9 1857 aa13.36□□□□□ -0.27
COL5A1-202ENST00000371820 CCDC88AQ3V6T2 1871 aa13.36□□□□□ -0.27
COL5A1-202ENST00000371820 ARFGEF2Q9Y6D5 1785 aa13.36□□□□□ -0.27
COL5A1-202ENST00000371820 PDE6BP35913 854 aa13.36□□□□□ -0.27
COL5A1-202ENST00000371820 ADAMTS8Q9UP79 889 aa13.36□□□□□ -0.27
COL5A1-202ENST00000371820 GLTPD2A6NH11 291 aa13.35□□□□□ -0.27
COL5A1-202ENST00000371820 ST5P78524 1137 aa13.35□□□□□ -0.27
COL5A1-202ENST00000371820 NEUROD2Q15784 382 aa13.35□□□□□ -0.27
COL5A1-202ENST00000371820 CNBD1Q8NA66 436 aa13.35□□□□□ -0.27
COL5A1-202ENST00000371820 NBPF26B4DH59 902 aa13.34□□□□□ -0.27
COL5A1-202ENST00000371820 PIP4K2AP48426 406 aaPredicted RBP13.34□□□□□ -0.27
COL5A1-202ENST00000371820 NBPF10Q6P3W6 841 aaKnown RBP13.34□□□□□ -0.27
COL5A1-202ENST00000371820 KIF6Q6ZMV9 814 aa13.34□□□□□ -0.27
COL5A1-202ENST00000371820 CCDC24Q8N4L8 307 aa13.34□□□□□ -0.27
COL5A1-202ENST00000371820 NBPF15Q8N660 670 aa13.34□□□□□ -0.27
COL5A1-202ENST00000371820 ZNF622Q969S3 477 aaKnown RBP eCLIP13.34□□□□□ -0.27
COL5A1-202ENST00000371820 RRP7AQ9Y3A4 280 aaKnown RBP13.34□□□□□ -0.27
COL5A1-202ENST00000371820 DICER1Q9UPY3 1922 aaKnown RBP13.34□□□□□ -0.27
COL5A1-202ENST00000371820 CALD1Q05682 793 aaKnown RBP13.33□□□□□ -0.28
COL5A1-202ENST00000371820 SMC1BQ8NDV3 1235 aa13.33□□□□□ -0.28
COL5A1-202ENST00000371820 CACNA1SQ13698 1873 aa13.33□□□□□ -0.28
COL5A1-202ENST00000371820 LTBP3Q9NS15 1303 aa13.33□□□□□ -0.28
COL5A1-202ENST00000371820 SLX4Q8IY92 1834 aa13.32□□□□□ -0.28
COL5A1-202ENST00000371820 ERVV-1B6SEH8 477 aa13.32□□□□□ -0.28
COL5A1-202ENST00000371820 C21orf2O43822 256 aa13.32□□□□□ -0.28
COL5A1-202ENST00000371820 VEGFAP15692 232 aaPredicted RBP13.32□□□□□ -0.28
COL5A1-202ENST00000371820 HTRA3P83110 453 aa13.32□□□□□ -0.28
COL5A1-202ENST00000371820 STYK1Q6J9G0 422 aa13.32□□□□□ -0.28
COL5A1-202ENST00000371820 KLRG1Q96E93 195 aa13.32□□□□□ -0.28
COL5A1-202ENST00000371820 CCDC136Q96JN2 1154 aa13.32□□□□□ -0.28
COL5A1-202ENST00000371820 SRGNP10124 158 aa13.31□□□□□ -0.28
COL5A1-202ENST00000371820 NBPF5PQ86XG9 351 aaPredicted RBP13.31□□□□□ -0.28
COL5A1-202ENST00000371820 NGEFQ8N5V2 710 aa13.31□□□□□ -0.28
COL5A1-202ENST00000371820 CNKSR1Q969H4 720 aa13.31□□□□□ -0.28
COL5A1-202ENST00000371820 TRIM35Q9UPQ4 493 aa13.31□□□□□ -0.28
COL5A1-202ENST00000371820 CHL1O00533 1208 aa13.3□□□□□ -0.28
COL5A1-202ENST00000371820 MYL6BP14649 208 aa13.3□□□□□ -0.28
COL5A1-202ENST00000371820 PRPF40BQ6NWY9 871 aaKnown RBP13.3□□□□□ -0.28
COL5A1-202ENST00000371820 TPTE2Q6XPS3 522 aa13.3□□□□□ -0.28
COL5A1-202ENST00000371820 JMYQ8N9B5 988 aa13.3□□□□□ -0.28
COL5A1-202ENST00000371820 MASTLQ96GX5 879 aa13.3□□□□□ -0.28
COL5A1-202ENST00000371820 NYXQ9GZU5 481 aa13.3□□□□□ -0.28
COL5A1-202ENST00000371820 TAOK3Q9H2K8 898 aa13.3□□□□□ -0.28
COL5A1-202ENST00000371820 ZNF219Q9P2Y4 722 aaPredicted RBP13.3□□□□□ -0.28
COL5A1-202ENST00000371820 NIP7Q9Y221 180 aaKnown RBP eCLIP13.3□□□□□ -0.28
COL5A1-202ENST00000371820 LAS1LQ9Y4W2 734 aaKnown RBP13.3□□□□□ -0.28
COL5A1-202ENST00000371820 MAP3K15Q6ZN16 1313 aa13.3□□□□□ -0.28
COL5A1-202ENST00000371820 POTECB2RU33 542 aa13.29□□□□□ -0.28
COL5A1-202ENST00000371820 HOXB7P09629 217 aa13.29□□□□□ -0.28
COL5A1-202ENST00000371820 EIF2S2P20042 333 aaKnown RBP13.29□□□□□ -0.28
COL5A1-202ENST00000371820 ERFEQ4G0M1 354 aa13.29□□□□□ -0.28
COL5A1-202ENST00000371820 SOGA3Q5TF21 947 aa13.29□□□□□ -0.28
COL5A1-202ENST00000371820 CFAP44Q96MT7 982 aa13.29□□□□□ -0.28
COL5A1-202ENST00000371820 APAF1O14727 1248 aa13.28□□□□□ -0.28
COL5A1-202ENST00000371820 GTF2E1P29083 439 aaPredicted RBP13.28□□□□□ -0.28
COL5A1-202ENST00000371820 IRX6P78412 446 aaPredicted RBP13.28□□□□□ -0.28
COL5A1-202ENST00000371820 DPY19L2Q6NUT2 758 aa13.28□□□□□ -0.28
COL5A1-202ENST00000371820 IBTKQ9P2D0 1353 aaPredicted RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 156.1 ms