RNA–Protein interactions for RNA: ENST00000371419.6

PFDN4-201, Transcript of prefoldin subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-201ENST00000371419 COL24A1Q17RW2 1714 aa20.48■□□□□ 0.87
PFDN4-201ENST00000371419 SCN7AQ01118 1682 aa20.46■□□□□ 0.87
PFDN4-201ENST00000371419 LRP5O75197 1615 aa20.46■□□□□ 0.87
PFDN4-201ENST00000371419 RGL2O15211 777 aa20.46■□□□□ 0.87
PFDN4-201ENST00000371419 COPS6Q7L5N1 327 aa20.46■□□□□ 0.87
PFDN4-201ENST00000371419 XAGE3Q8WTP9 111 aa20.46■□□□□ 0.87
PFDN4-201ENST00000371419 MAP3K15Q6ZN16 1313 aa20.45■□□□□ 0.86
PFDN4-201ENST00000371419 ERVV-1B6SEH8 477 aa20.45■□□□□ 0.86
PFDN4-201ENST00000371419 TCERG1O14776 1098 aaKnown RBP20.45■□□□□ 0.86
PFDN4-201ENST00000371419 MMP10P09238 476 aa20.45■□□□□ 0.86
PFDN4-201ENST00000371419 AIMP1Q12904 312 aaKnown RBP20.45■□□□□ 0.86
PFDN4-201ENST00000371419 CLEC4GQ6UXB4 293 aa20.45■□□□□ 0.86
PFDN4-201ENST00000371419 ZNF652Q9Y2D9 606 aa20.45■□□□□ 0.86
PFDN4-201ENST00000371419 BCORQ6W2J9 1755 aa20.44■□□□□ 0.86
PFDN4-201ENST00000371419 ZBTB3Q9H5J0 574 aa20.43■□□□□ 0.86
PFDN4-201ENST00000371419 SLC4A2P04920 1241 aa20.43■□□□□ 0.86
PFDN4-201ENST00000371419 CT47B1P0C2W7 299 aaPredicted RBP20.43■□□□□ 0.86
PFDN4-201ENST00000371419 TM4SF1P30408 202 aa20.43■□□□□ 0.86
PFDN4-201ENST00000371419 HLFQ16534 295 aa20.43■□□□□ 0.86
PFDN4-201ENST00000371419 PHAXQ9H814 394 aaKnown RBP20.43■□□□□ 0.86
PFDN4-201ENST00000371419 PPP1R1BQ9UD71 204 aaPredicted RBP20.43■□□□□ 0.86
PFDN4-201ENST00000371419 NFIXQ14938 502 aa20.42■□□□□ 0.86
PFDN4-201ENST00000371419 TBC1D9BQ66K14 1250 aa20.42■□□□□ 0.86
PFDN4-201ENST00000371419 ZNF428Q96B54 188 aa20.42■□□□□ 0.86
PFDN4-201ENST00000371419 PARP3Q9Y6F1 533 aa20.42■□□□□ 0.86
PFDN4-201ENST00000371419 BICDL1Q6ZP65 573 aa20.41■□□□□ 0.86
PFDN4-201ENST00000371419 DDR1Q08345 913 aa20.4■□□□□ 0.86
PFDN4-201ENST00000371419 GIGYF2Q6Y7W6 1299 aaKnown RBP20.4■□□□□ 0.86
PFDN4-201ENST00000371419 ANKRD13DQ6ZTN6 518 aa20.4■□□□□ 0.86
PFDN4-201ENST00000371419 PLBD2Q8NHP8 589 aa20.4■□□□□ 0.86
PFDN4-201ENST00000371419 SETDB2Q96T68 719 aa20.4■□□□□ 0.86
PFDN4-201ENST00000371419 CACNA1FO60840 1977 aa20.39■□□□□ 0.85
PFDN4-201ENST00000371419 POLRMTO00411 1230 aaKnown RBP20.38■□□□□ 0.85
PFDN4-201ENST00000371419 DDX58O95786 925 aaKnown RBP20.38■□□□□ 0.85
PFDN4-201ENST00000371419 G2E3Q7L622 706 aa20.37■□□□□ 0.85
PFDN4-201ENST00000371419 NIP7Q9Y221 180 aaKnown RBP eCLIP20.37■□□□□ 0.85
PFDN4-201ENST00000371419 ATP10DQ9P241 1426 aa20.37■□□□□ 0.85
PFDN4-201ENST00000371419 NUP98P52948 1817 aa20.37■□□□□ 0.85
PFDN4-201ENST00000371419 CARMIL3Q8ND23 1372 aa20.37■□□□□ 0.85
PFDN4-201ENST00000371419 FLIIQ13045 1269 aa20.37■□□□□ 0.85
PFDN4-201ENST00000371419 ALDH1L2Q3SY69 923 aa20.37■□□□□ 0.85
PFDN4-201ENST00000371419 HSP90AB3PQ58FF7 597 aa20.37■□□□□ 0.85
PFDN4-201ENST00000371419 RIC3Q7Z5B4 369 aa20.37■□□□□ 0.85
PFDN4-201ENST00000371419 SERPINB2P05120 415 aa20.36■□□□□ 0.85
PFDN4-201ENST00000371419 SSH1Q8WYL5 1049 aa20.36■□□□□ 0.85
PFDN4-201ENST00000371419 ZNF34Q8IZ26 560 aa20.35■□□□□ 0.85
PFDN4-201ENST00000371419 GPTP24298 496 aa20.34■□□□□ 0.85
PFDN4-201ENST00000371419 TCIRG1Q13488 830 aa20.34■□□□□ 0.85
PFDN4-201ENST00000371419 KSR2Q6VAB6 950 aa20.34■□□□□ 0.85
PFDN4-201ENST00000371419 MRPL50Q8N5N7 158 aaKnown RBP20.34■□□□□ 0.85
PFDN4-201ENST00000371419 PI4KAP2A4QPH2 592 aa20.33■□□□□ 0.85
PFDN4-201ENST00000371419 FKBP5Q13451 457 aaPredicted RBP20.33■□□□□ 0.85
PFDN4-201ENST00000371419 KLHL34Q8N239 644 aa20.33■□□□□ 0.85
PFDN4-201ENST00000371419 PI4KAP1Q8N8J0 262 aa20.33■□□□□ 0.85
PFDN4-201ENST00000371419 FHDC1Q9C0D6 1143 aaPredicted RBP20.33■□□□□ 0.85
PFDN4-201ENST00000371419 SMC4Q9NTJ3 1288 aa20.33■□□□□ 0.85
PFDN4-201ENST00000371419 PARP10Q53GL7 1025 aa20.32■□□□□ 0.84
PFDN4-201ENST00000371419 NBPF5PQ86XG9 351 aaPredicted RBP20.32■□□□□ 0.84
PFDN4-201ENST00000371419 BCL2L13Q9BXK5 485 aa20.32■□□□□ 0.84
PFDN4-201ENST00000371419 MAP3K2Q9Y2U5 619 aa20.32■□□□□ 0.84
PFDN4-201ENST00000371419 CD2APQ9Y5K6 639 aa20.32■□□□□ 0.84
PFDN4-201ENST00000371419 ARFGEF2Q9Y6D5 1785 aa20.32■□□□□ 0.84
PFDN4-201ENST00000371419 RARSP54136 660 aaKnown RBP20.31■□□□□ 0.84
PFDN4-201ENST00000371419 UBN2Q6ZU65 1347 aa20.31■□□□□ 0.84
PFDN4-201ENST00000371419 ADCY9O60503 1353 aa20.31■□□□□ 0.84
PFDN4-201ENST00000371419 NRXN2Q9P2S2 1712 aa20.31■□□□□ 0.84
PFDN4-201ENST00000371419 C10orf71Q711Q0 1435 aa20.31■□□□□ 0.84
PFDN4-201ENST00000371419 AFDNP55196 1824 aaKnown RBP20.31■□□□□ 0.84
PFDN4-201ENST00000371419 NPHP1O15259 732 aa20.3■□□□□ 0.84
PFDN4-201ENST00000371419 TPTE2Q6XPS3 522 aa20.3■□□□□ 0.84
PFDN4-201ENST00000371419 CNBD1Q8NA66 436 aa20.3■□□□□ 0.84
PFDN4-201ENST00000371419 METTL22Q9BUU2 404 aaPredicted RBP20.3■□□□□ 0.84
PFDN4-201ENST00000371419 ANKRD36CQ5JPF3 1778 aa20.3■□□□□ 0.84
PFDN4-201ENST00000371419 FAM177BA6PVY3 158 aa20.3■□□□□ 0.84
PFDN4-201ENST00000371419 PRR5LQ6MZQ0 368 aa20.3■□□□□ 0.84
PFDN4-201ENST00000371419 NLRP10Q86W26 655 aa20.3■□□□□ 0.84
PFDN4-201ENST00000371419 SYT17Q9BSW7 474 aa20.3■□□□□ 0.84
PFDN4-201ENST00000371419 ISCA1Q9BUE6 129 aa20.3■□□□□ 0.84
PFDN4-201ENST00000371419 NYXQ9GZU5 481 aa20.3■□□□□ 0.84
PFDN4-201ENST00000371419 ATP5J2-PTCD1G3V325 749 aa20.29■□□□□ 0.84
PFDN4-201ENST00000371419 BRPF1P55201 1214 aaPredicted RBP20.29■□□□□ 0.84
PFDN4-201ENST00000371419 TRIM28Q13263 835 aaKnown RBP20.29■□□□□ 0.84
PFDN4-201ENST00000371419 SUSD4Q5VX71 490 aa20.29■□□□□ 0.84
PFDN4-201ENST00000371419 PPP1R42Q7Z4L9 355 aa20.29■□□□□ 0.84
PFDN4-201ENST00000371419 MYD88Q99836 296 aa20.29■□□□□ 0.84
PFDN4-201ENST00000371419 IBTKQ9P2D0 1353 aaPredicted RBP20.29■□□□□ 0.84
PFDN4-201ENST00000371419 PTPRCP08575 1304 aa20.28■□□□□ 0.84
PFDN4-201ENST00000371419 ST5P78524 1137 aa20.28■□□□□ 0.84
PFDN4-201ENST00000371419 NEXNQ0ZGT2 675 aa20.28■□□□□ 0.84
PFDN4-201ENST00000371419 DNAAF4Q8WXU2 420 aa20.28■□□□□ 0.84
PFDN4-201ENST00000371419 GTF2E1P29083 439 aaPredicted RBP20.27■□□□□ 0.84
PFDN4-201ENST00000371419 UTP14AQ9BVJ6 771 aaKnown RBP20.27■□□□□ 0.84
PFDN4-201ENST00000371419 NTSR2O95665 410 aa20.26■□□□□ 0.83
PFDN4-201ENST00000371419 KIF13BQ9NQT8 1826 aa20.26■□□□□ 0.83
PFDN4-201ENST00000371419 RNF123Q5XPI4 1314 aa20.25■□□□□ 0.83
PFDN4-201ENST00000371419 F6X3S4 739 aa20.25■□□□□ 0.83
PFDN4-201ENST00000371419 TGFB2P61812 414 aa20.25■□□□□ 0.83
PFDN4-201ENST00000371419 CCDC24Q8N4L8 307 aa20.25■□□□□ 0.83
PFDN4-201ENST00000371419 CCDC191Q8NCU4 936 aa20.25■□□□□ 0.83
PFDN4-201ENST00000371419 BRIP1Q9BX63 1249 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms