RNA–Protein interactions for RNA: ENST00000370397.7

CHUK-201, Transcript of conserved helix-loop-helix ubiquitous kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHUK, Length 3,625 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHUK-201ENST00000370397 RIOK3O14730 519 aaKnown RBP21.03■□□□□ 0.96
CHUK-201ENST00000370397 PTH1RQ03431 593 aa21.03■□□□□ 0.96
CHUK-201ENST00000370397 ZSWIM6Q9HCJ5 1215 aa21.03■□□□□ 0.96
CHUK-201ENST00000370397 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.03■□□□□ 0.96
CHUK-201ENST00000370397 GJB2P29033 226 aa21.02■□□□□ 0.96
CHUK-201ENST00000370397 PHAXQ9H814 394 aaKnown RBP21.02■□□□□ 0.96
CHUK-201ENST00000370397 TTC21AQ8NDW8 1320 aa21.02■□□□□ 0.96
CHUK-201ENST00000370397 DNTTIP2Q5QJE6 756 aaKnown RBP21.02■□□□□ 0.95
CHUK-201ENST00000370397 VPS53Q5VIR6 699 aa21.02■□□□□ 0.95
CHUK-201ENST00000370397 PPP4R3BQ5MIZ7 849 aa21.01■□□□□ 0.95
CHUK-201ENST00000370397 RBM43Q6ZSC3 357 aaKnown RBP21.01■□□□□ 0.95
CHUK-201ENST00000370397 SPG7Q9UQ90 795 aa21.01■□□□□ 0.95
CHUK-201ENST00000370397 MRVI1Q9Y6F6 885 aa21.01■□□□□ 0.95
CHUK-201ENST00000370397 ADAMTSL3P82987 1691 aa21.01■□□□□ 0.95
CHUK-201ENST00000370397 ADGRL3Q9HAR2 1447 aa21.01■□□□□ 0.95
CHUK-201ENST00000370397 RTF1Q92541 710 aaKnown RBP21.01■□□□□ 0.95
CHUK-201ENST00000370397 TM6SF1Q9BZW5 370 aa21.01■□□□□ 0.95
CHUK-201ENST00000370397 UBTFL1P0CB47 393 aaPredicted RBP21■□□□□ 0.95
CHUK-201ENST00000370397 TTC6Q86TZ1 520 aa21■□□□□ 0.95
CHUK-201ENST00000370397 NBPF7P0C2Y1 421 aaPredicted RBP21■□□□□ 0.95
CHUK-201ENST00000370397 NECTIN1Q15223 517 aa21■□□□□ 0.95
CHUK-201ENST00000370397 ME3Q16798 604 aa21■□□□□ 0.95
CHUK-201ENST00000370397 CASTP20810 708 aaKnown RBP20.99■□□□□ 0.95
CHUK-201ENST00000370397 NECTIN2Q92692 538 aa20.99■□□□□ 0.95
CHUK-201ENST00000370397 BABAM1Q9NWV8 329 aa20.99■□□□□ 0.95
CHUK-201ENST00000370397 SMC3Q9UQE7 1217 aa20.99■□□□□ 0.95
CHUK-201ENST00000370397 ELP1O95163 1332 aa20.99■□□□□ 0.95
CHUK-201ENST00000370397 LMO7Q8WWI1 1683 aa20.99■□□□□ 0.95
CHUK-201ENST00000370397 NPHP4O75161 1426 aaPredicted RBP20.99■□□□□ 0.95
CHUK-201ENST00000370397 CCDC83Q8IWF9 413 aa20.99■□□□□ 0.95
CHUK-201ENST00000370397 CEMIPQ8WUJ3 1361 aa20.99■□□□□ 0.95
CHUK-201ENST00000370397 SNRKQ9NRH2 765 aa20.98■□□□□ 0.95
CHUK-201ENST00000370397 CCDC171Q6TFL3 1326 aa20.98■□□□□ 0.95
CHUK-201ENST00000370397 CWC27Q6UX04 472 aaKnown RBP20.98■□□□□ 0.95
CHUK-201ENST00000370397 ZHX1Q9UKY1 873 aaPredicted RBP20.98■□□□□ 0.95
CHUK-201ENST00000370397 LTN1O94822 1766 aa20.98■□□□□ 0.95
CHUK-201ENST00000370397 CBX1P83916 185 aa20.98■□□□□ 0.95
CHUK-201ENST00000370397 KIF1BPQ96EK5 621 aa20.98■□□□□ 0.95
CHUK-201ENST00000370397 TMEM2Q9UHN6 1383 aa20.97■□□□□ 0.95
CHUK-201ENST00000370397 SURF6O75683 361 aaKnown RBP20.97■□□□□ 0.95
CHUK-201ENST00000370397 ATP6V1DQ9Y5K8 247 aa20.97■□□□□ 0.95
CHUK-201ENST00000370397 JCADQ9P266 1359 aa20.97■□□□□ 0.95
CHUK-201ENST00000370397 TTC41PQ6P2S7 1318 aa20.97■□□□□ 0.95
CHUK-201ENST00000370397 GNAT3A8MTJ3 354 aa20.97■□□□□ 0.95
CHUK-201ENST00000370397 LIG1P18858 919 aa20.97■□□□□ 0.95
CHUK-201ENST00000370397 BEND3Q5T5X7 828 aa20.97■□□□□ 0.95
CHUK-201ENST00000370397 CNTROBQ8N137 903 aa20.97■□□□□ 0.95
CHUK-201ENST00000370397 PLA2G4DQ86XP0 818 aa20.96■□□□□ 0.95
CHUK-201ENST00000370397 TPCN1Q9ULQ1 816 aa20.96■□□□□ 0.95
CHUK-201ENST00000370397 FAM200AQ8TCP9 573 aa20.96■□□□□ 0.95
CHUK-201ENST00000370397 NCBP1Q09161 790 aaKnown RBP20.96■□□□□ 0.95
CHUK-201ENST00000370397 GTPBP4Q9BZE4 634 aaKnown RBP20.96■□□□□ 0.95
CHUK-201ENST00000370397 TPM3P06753 285 aa20.95■□□□□ 0.94
CHUK-201ENST00000370397 MTX1Q13505 466 aa20.95■□□□□ 0.94
CHUK-201ENST00000370397 ADCY9O60503 1353 aa20.95■□□□□ 0.94
CHUK-201ENST00000370397 RGPD2P0DJD1 1756 aa20.95■□□□□ 0.94
CHUK-201ENST00000370397 PTGS1P23219 599 aa20.95■□□□□ 0.94
CHUK-201ENST00000370397 CDC37L1Q7L3B6 337 aa20.95■□□□□ 0.94
CHUK-201ENST00000370397 SH2B1Q9NRF2 756 aaPredicted RBP20.95■□□□□ 0.94
CHUK-201ENST00000370397 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.94■□□□□ 0.94
CHUK-201ENST00000370397 SRGAP3O43295 1099 aa20.94■□□□□ 0.94
CHUK-201ENST00000370397 MLECQ14165 292 aa20.94■□□□□ 0.94
CHUK-201ENST00000370397 SPC24Q8NBT2 197 aa20.93■□□□□ 0.94
CHUK-201ENST00000370397 PDRG1Q9NUG6 133 aa20.93■□□□□ 0.94
CHUK-201ENST00000370397 SIPA1L3O60292 1781 aaPredicted RBP20.93■□□□□ 0.94
CHUK-201ENST00000370397 CCDC192P0DO97 292 aa20.93■□□□□ 0.94
CHUK-201ENST00000370397 LAMA4Q16363 1823 aa20.93■□□□□ 0.94
CHUK-201ENST00000370397 TYRO3Q06418 890 aa20.93■□□□□ 0.94
CHUK-201ENST00000370397 LUZP1Q86V48 1076 aa20.93■□□□□ 0.94
CHUK-201ENST00000370397 PDCL2Q8N4E4 241 aa20.92■□□□□ 0.94
CHUK-201ENST00000370397 ZSCAN31Q96LW9 406 aaPredicted RBP20.92■□□□□ 0.94
CHUK-201ENST00000370397 MRC1P22897 1456 aa20.92■□□□□ 0.94
CHUK-201ENST00000370397 U2AF2P26368 475 aaKnown RBP eCLIP20.92■□□□□ 0.94
CHUK-201ENST00000370397 SYCP1Q15431 976 aa20.92■□□□□ 0.94
CHUK-201ENST00000370397 TAF7Q15545 349 aaPredicted RBP20.92■□□□□ 0.94
CHUK-201ENST00000370397 JAKMIP1Q96N16 626 aaKnown RBP20.92■□□□□ 0.94
CHUK-201ENST00000370397 LRMPQ12912 555 aa20.91■□□□□ 0.94
CHUK-201ENST00000370397 PRPF40BQ6NWY9 871 aaKnown RBP20.91■□□□□ 0.94
CHUK-201ENST00000370397 NECAB1Q8N987 351 aa20.91■□□□□ 0.94
CHUK-201ENST00000370397 DIAPH3Q9NSV4 1193 aa20.91■□□□□ 0.94
CHUK-201ENST00000370397 NRBP1Q9UHY1 535 aa20.91■□□□□ 0.94
CHUK-201ENST00000370397 SOX12O15370 315 aa20.91■□□□□ 0.94
CHUK-201ENST00000370397 TPRNQ4KMQ1 711 aa20.91■□□□□ 0.94
CHUK-201ENST00000370397 CBX8Q9HC52 389 aa20.91■□□□□ 0.94
CHUK-201ENST00000370397 TAF6LQ9Y6J9 622 aa20.91■□□□□ 0.94
CHUK-201ENST00000370397 GLRX3O76003 335 aaKnown RBP20.9■□□□□ 0.94
CHUK-201ENST00000370397 FAM173BQ6P4H8 233 aa20.9■□□□□ 0.94
CHUK-201ENST00000370397 MAP4K1Q92918 833 aa20.9■□□□□ 0.94
CHUK-201ENST00000370397 ALDH8A1Q9H2A2 487 aaPredicted RBP20.9■□□□□ 0.94
CHUK-201ENST00000370397 PLEKHG1Q9ULL1 1385 aa20.9■□□□□ 0.94
CHUK-201ENST00000370397 TDRD7Q8NHU6 1098 aaKnown RBP20.9■□□□□ 0.94
CHUK-201ENST00000370397 NUTM2FA1L443 756 aa20.89■□□□□ 0.93
CHUK-201ENST00000370397 SPDYE4A6NLX3 237 aa20.89■□□□□ 0.93
CHUK-201ENST00000370397 HOXC9P31274 260 aa20.89■□□□□ 0.93
CHUK-201ENST00000370397 MAP3K11Q16584 847 aa20.89■□□□□ 0.93
CHUK-201ENST00000370397 HDGFL1Q5TGJ6 251 aa20.89■□□□□ 0.93
CHUK-201ENST00000370397 CTNNA3Q9UI47 895 aa20.89■□□□□ 0.93
CHUK-201ENST00000370397 ZSCAN25Q6NSZ9 544 aa20.88■□□□□ 0.93
CHUK-201ENST00000370397 CYP46A1Q9Y6A2 500 aa20.88■□□□□ 0.93
CHUK-201ENST00000370397 PHRF1Q9P1Y6 1649 aaKnown RBP20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms