RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 EN1Q05925 392 aaPredicted RBP13.86□□□□□ -0.19
BRCC3-204ENST00000369462 INTS3Q68E01 1043 aaKnown RBP13.86□□□□□ -0.19
BRCC3-204ENST00000369462 PLBD2Q8NHP8 589 aa13.86□□□□□ -0.19
BRCC3-204ENST00000369462 TBC1D2BQ9UPU7 963 aa13.86□□□□□ -0.19
BRCC3-204ENST00000369462 COL5A3P25940 1745 aaPredicted RBP13.86□□□□□ -0.19
BRCC3-204ENST00000369462 TNS1Q9HBL0 1735 aaKnown RBP13.86□□□□□ -0.19
BRCC3-204ENST00000369462 KIF6Q6ZMV9 814 aa13.86□□□□□ -0.19
BRCC3-204ENST00000369462 SMIM5Q71RC9 77 aa13.86□□□□□ -0.19
BRCC3-204ENST00000369462 CCT4P50991 539 aaKnown RBP13.85□□□□□ -0.19
BRCC3-204ENST00000369462 AK7Q96M32 723 aa13.85□□□□□ -0.19
BRCC3-204ENST00000369462 RPS6KA4O75676 772 aa13.85□□□□□ -0.19
BRCC3-204ENST00000369462 EZH2Q15910 746 aaKnown RBP13.85□□□□□ -0.19
BRCC3-204ENST00000369462 DZIP3Q86Y13 1208 aaKnown RBP13.85□□□□□ -0.19
BRCC3-204ENST00000369462 DDX19BQ9UMR2 479 aa13.85□□□□□ -0.19
BRCC3-204ENST00000369462 BAG6P46379 1132 aa13.84□□□□□ -0.19
BRCC3-204ENST00000369462 DEFB132Q7Z7B7 95 aa13.84□□□□□ -0.19
BRCC3-204ENST00000369462 CAMKK2Q96RR4 588 aa13.84□□□□□ -0.19
BRCC3-204ENST00000369462 RTCBQ9Y3I0 505 aaKnown RBP13.84□□□□□ -0.19
BRCC3-204ENST00000369462 BEND3Q5T5X7 828 aa13.84□□□□□ -0.19
BRCC3-204ENST00000369462 METTL22Q9BUU2 404 aaPredicted RBP13.84□□□□□ -0.19
BRCC3-204ENST00000369462 SRCIN1Q9C0H9 1055 aa13.84□□□□□ -0.19
BRCC3-204ENST00000369462 COL15A1P39059 1388 aa13.84□□□□□ -0.19
BRCC3-204ENST00000369462 NEXNQ0ZGT2 675 aa13.83□□□□□ -0.19
BRCC3-204ENST00000369462 AMIGO3Q86WK7 504 aa13.83□□□□□ -0.19
BRCC3-204ENST00000369462 MYD88Q99836 296 aa13.83□□□□□ -0.19
BRCC3-204ENST00000369462 TAF1LQ8IZX4 1826 aa13.83□□□□□ -0.2
BRCC3-204ENST00000369462 MAP3K15Q6ZN16 1313 aa13.83□□□□□ -0.2
BRCC3-204ENST00000369462 HMGB2P26583 209 aaKnown RBP13.83□□□□□ -0.2
BRCC3-204ENST00000369462 CWF19L2Q2TBE0 894 aaKnown RBP13.83□□□□□ -0.2
BRCC3-204ENST00000369462 ERICH6BQ5W0A0 696 aa13.82□□□□□ -0.2
BRCC3-204ENST00000369462 C4BP0C0L5 1744 aa13.82□□□□□ -0.2
BRCC3-204ENST00000369462 ATP5J2-PTCD1G3V325 749 aa13.82□□□□□ -0.2
BRCC3-204ENST00000369462 ZBTB7BO15156 539 aaPredicted RBP13.82□□□□□ -0.2
BRCC3-204ENST00000369462 PHF14O94880 888 aa13.82□□□□□ -0.2
BRCC3-204ENST00000369462 HLFQ16534 295 aa13.82□□□□□ -0.2
BRCC3-204ENST00000369462 LINS1Q8NG48 757 aa13.82□□□□□ -0.2
BRCC3-204ENST00000369462 RREB1Q92766 1687 aa13.82□□□□□ -0.2
BRCC3-204ENST00000369462 IGKV5-2P06315 115 aa13.82□□□□□ -0.2
BRCC3-204ENST00000369462 CCDC125Q86Z20 511 aa13.82□□□□□ -0.2
BRCC3-204ENST00000369462 PXDNLA1KZ92 1463 aa13.81□□□□□ -0.2
BRCC3-204ENST00000369462 A0A087WZG4 1122 aa13.81□□□□□ -0.2
BRCC3-204ENST00000369462 GIGYF2Q6Y7W6 1299 aaKnown RBP13.81□□□□□ -0.2
BRCC3-204ENST00000369462 ERVV-1B6SEH8 477 aa13.81□□□□□ -0.2
BRCC3-204ENST00000369462 TRAPPC3LQ5T215 181 aa13.81□□□□□ -0.2
BRCC3-204ENST00000369462 PPP4R3CPQ6ZMV5 832 aa13.81□□□□□ -0.2
BRCC3-204ENST00000369462 MEIS3Q99687 375 aa13.81□□□□□ -0.2
BRCC3-204ENST00000369462 ATP10DQ9P241 1426 aa13.8□□□□□ -0.2
BRCC3-204ENST00000369462 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.8□□□□□ -0.2
BRCC3-204ENST00000369462 CAMTA2O94983 1202 aa13.8□□□□□ -0.2
BRCC3-204ENST00000369462 ARHGEF1Q92888 912 aaKnown RBP13.8□□□□□ -0.2
BRCC3-204ENST00000369462 ZBTB40Q9NUA8 1239 aa13.8□□□□□ -0.2
BRCC3-204ENST00000369462 TFCP2L1Q9NZI6 479 aa13.8□□□□□ -0.2
BRCC3-204ENST00000369462 ALDH1L1O75891 902 aa13.8□□□□□ -0.2
BRCC3-204ENST00000369462 TCIRG1Q13488 830 aa13.8□□□□□ -0.2
BRCC3-204ENST00000369462 ZNF827Q17R98 1081 aa13.8□□□□□ -0.2
BRCC3-204ENST00000369462 USP44Q9H0E7 712 aa13.8□□□□□ -0.2
BRCC3-204ENST00000369462 NEURL1BA8MQ27 555 aa13.79□□□□□ -0.2
BRCC3-204ENST00000369462 CHMP4BQ9H444 224 aaKnown RBP13.79□□□□□ -0.2
BRCC3-204ENST00000369462 RFC4P35249 363 aa13.79□□□□□ -0.2
BRCC3-204ENST00000369462 ARFGEF2Q9Y6D5 1785 aa13.78□□□□□ -0.2
BRCC3-204ENST00000369462 ZPR1O75312 459 aa13.78□□□□□ -0.2
BRCC3-204ENST00000369462 AKT1S1Q96B36 256 aa13.78□□□□□ -0.2
BRCC3-204ENST00000369462 C9orf78Q9NZ63 289 aaPredicted RBP13.78□□□□□ -0.2
BRCC3-204ENST00000369462 SRP68Q9UHB9 627 aaKnown RBP13.78□□□□□ -0.2
BRCC3-204ENST00000369462 NARFQ9UHQ1 456 aa13.78□□□□□ -0.2
BRCC3-204ENST00000369462 GPTP24298 496 aa13.78□□□□□ -0.2
BRCC3-204ENST00000369462 SSFA2P28290 1259 aa13.78□□□□□ -0.2
BRCC3-204ENST00000369462 GCKRQ14397 625 aa13.78□□□□□ -0.2
BRCC3-204ENST00000369462 C1orf115Q9H7X2 142 aa13.78□□□□□ -0.2
BRCC3-204ENST00000369462 PPP4R2Q9NY27 417 aa13.78□□□□□ -0.2
BRCC3-204ENST00000369462 RGPD3A6NKT7 1758 aaPredicted RBP13.78□□□□□ -0.2
BRCC3-204ENST00000369462 RGPD4Q7Z3J3 1758 aa13.78□□□□□ -0.2
BRCC3-204ENST00000369462 NBPF7P0C2Y1 421 aaPredicted RBP13.77□□□□□ -0.2
BRCC3-204ENST00000369462 AAMPQ13685 434 aa13.77□□□□□ -0.2
BRCC3-204ENST00000369462 HSP90AB3PQ58FF7 597 aa13.77□□□□□ -0.2
BRCC3-204ENST00000369462 USPL1Q5W0Q7 1092 aa13.77□□□□□ -0.2
BRCC3-204ENST00000369462 GNAI3P08754 354 aa13.77□□□□□ -0.21
BRCC3-204ENST00000369462 UPF1Q92900 1129 aaKnown RBP eCLIP13.77□□□□□ -0.21
BRCC3-204ENST00000369462 ISCA1Q9BUE6 129 aa13.77□□□□□ -0.21
BRCC3-204ENST00000369462 ZNF652Q9Y2D9 606 aa13.77□□□□□ -0.21
BRCC3-204ENST00000369462 NUP188Q5SRE5 1749 aa13.77□□□□□ -0.21
BRCC3-204ENST00000369462 CCDC191Q8NCU4 936 aa13.77□□□□□ -0.21
BRCC3-204ENST00000369462 ANO8Q9HCE9 1232 aaPredicted RBP13.77□□□□□ -0.21
BRCC3-204ENST00000369462 CWC25Q9NXE8 425 aaPredicted RBP13.77□□□□□ -0.21
BRCC3-204ENST00000369462 GRM8O00222 908 aa13.76□□□□□ -0.21
BRCC3-204ENST00000369462 UBTFL1P0CB47 393 aaPredicted RBP13.76□□□□□ -0.21
BRCC3-204ENST00000369462 CLEC4GQ6UXB4 293 aa13.76□□□□□ -0.21
BRCC3-204ENST00000369462 PCDHB15Q9Y5E8 787 aa13.76□□□□□ -0.21
BRCC3-204ENST00000369462 TRIM28Q13263 835 aaKnown RBP13.76□□□□□ -0.21
BRCC3-204ENST00000369462 B4GALNT3Q6L9W6 998 aa13.76□□□□□ -0.21
BRCC3-204ENST00000369462 JARID2Q92833 1246 aaPredicted RBP13.76□□□□□ -0.21
BRCC3-204ENST00000369462 CCDC136Q96JN2 1154 aa13.76□□□□□ -0.21
BRCC3-204ENST00000369462 BCL2L12Q9HB09 334 aa13.76□□□□□ -0.21
BRCC3-204ENST00000369462 USP42Q9H9J4 1324 aaKnown RBP13.75□□□□□ -0.21
BRCC3-204ENST00000369462 UBR3Q6ZT12 1888 aa13.75□□□□□ -0.21
BRCC3-204ENST00000369462 RTL5Q5HYW3 569 aaPredicted RBP13.75□□□□□ -0.21
BRCC3-204ENST00000369462 MSH5O43196 834 aa13.75□□□□□ -0.21
BRCC3-204ENST00000369462 SLC15A2Q16348 729 aa13.75□□□□□ -0.21
BRCC3-204ENST00000369462 NLRP10Q86W26 655 aa13.75□□□□□ -0.21
BRCC3-204ENST00000369462 ZNF34Q8IZ26 560 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms