RNA–Protein interactions for RNA: ENST00000369258.8

CHD1L-202, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1L, Length 2,967 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-202ENST00000369258 OVOS2Q6IE36 1432 aa15.46■□□□□ 0.07
CHD1L-202ENST00000369258 NRXN3Q9Y4C0 1643 aa15.46■□□□□ 0.07
CHD1L-202ENST00000369258 CBX1P83916 185 aa15.46■□□□□ 0.07
CHD1L-202ENST00000369258 STAP2Q9UGK3 403 aa15.46■□□□□ 0.07
CHD1L-202ENST00000369258 SSH2Q76I76 1423 aa15.46■□□□□ 0.07
CHD1L-202ENST00000369258 HOXC9P31274 260 aa15.46■□□□□ 0.07
CHD1L-202ENST00000369258 NOLC1Q14978 699 aaKnown RBP eCLIP15.46■□□□□ 0.074e-7■■■■□ 25.6
CHD1L-202ENST00000369258 LRRC2Q9BYS8 371 aa15.46■□□□□ 0.07
CHD1L-202ENST00000369258 CDC37L1Q7L3B6 337 aa15.45■□□□□ 0.06
CHD1L-202ENST00000369258 LUZP1Q86V48 1076 aa15.45■□□□□ 0.06
CHD1L-202ENST00000369258 SSH3Q8TE77 659 aa15.45■□□□□ 0.06
CHD1L-202ENST00000369258 TTC14Q96N46 770 aa15.45■□□□□ 0.06
CHD1L-202ENST00000369258 DIAPH3Q9NSV4 1193 aa15.45■□□□□ 0.06
CHD1L-202ENST00000369258 RAD50Q92878 1312 aa15.45■□□□□ 0.06
CHD1L-202ENST00000369258 F13A1P00488 732 aa15.45■□□□□ 0.06
CHD1L-202ENST00000369258 LIG1P18858 919 aa15.45■□□□□ 0.06
CHD1L-202ENST00000369258 ZNF710Q8N1W2 664 aa15.45■□□□□ 0.06
CHD1L-202ENST00000369258 BOLA2Q9H3K6 86 aa15.45■□□□□ 0.06
CHD1L-202ENST00000369258 LRMPQ12912 555 aa15.45■□□□□ 0.06
CHD1L-202ENST00000369258 HYPKQ9NX55 129 aa15.45■□□□□ 0.06
CHD1L-202ENST00000369258 NRBP1Q9UHY1 535 aa15.45■□□□□ 0.06
CHD1L-202ENST00000369258 C3P01024 1663 aa15.44■□□□□ 0.06
CHD1L-202ENST00000369258 GOLGB1Q14789 3259 aaKnown RBP15.44■□□□□ 0.06
CHD1L-202ENST00000369258 NBPF6Q5VWK0 638 aa15.44■□□□□ 0.06
CHD1L-202ENST00000369258 MYRIPQ8NFW9 859 aa15.44■□□□□ 0.06
CHD1L-202ENST00000369258 PIBF1Q8WXW3 757 aa15.44■□□□□ 0.06
CHD1L-202ENST00000369258 ERCC4Q92889 916 aaPredicted RBP15.44■□□□□ 0.06
CHD1L-202ENST00000369258 NBPF4Q96M43 638 aa15.44■□□□□ 0.06
CHD1L-202ENST00000369258 KCNF1Q9H3M0 494 aa15.44■□□□□ 0.06
CHD1L-202ENST00000369258 TPCN1Q9ULQ1 816 aa15.44■□□□□ 0.06
CHD1L-202ENST00000369258 LIMCH1Q9UPQ0 1083 aa15.44■□□□□ 0.06
CHD1L-202ENST00000369258 NAA30Q147X3 362 aaPredicted RBP15.44■□□□□ 0.06
CHD1L-202ENST00000369258 SETD1AO15047 1707 aaKnown RBP15.44■□□□□ 0.06
CHD1L-202ENST00000369258 LETM1O95202 739 aaPredicted RBP15.43■□□□□ 0.06
CHD1L-202ENST00000369258 PDRG1Q9NUG6 133 aa15.43■□□□□ 0.06
CHD1L-202ENST00000369258 IGSF1Q8N6C5 1336 aa15.43■□□□□ 0.06
CHD1L-202ENST00000369258 FLT4P35916 1363 aa15.43■□□□□ 0.06
CHD1L-202ENST00000369258 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.43■□□□□ 0.06
CHD1L-202ENST00000369258 AACSQ86V21 672 aa15.43■□□□□ 0.06
CHD1L-202ENST00000369258 MTMR6Q9Y217 621 aa15.43■□□□□ 0.06
CHD1L-202ENST00000369258 PLEKHG3A1L390 1219 aa15.42■□□□□ 0.06
CHD1L-202ENST00000369258 TMEM87AQ8NBN3 555 aa15.42■□□□□ 0.06
CHD1L-202ENST00000369258 IL17RAQ96F46 866 aa15.42■□□□□ 0.06
CHD1L-202ENST00000369258 C9orf78Q9NZ63 289 aaPredicted RBP15.42■□□□□ 0.06
CHD1L-202ENST00000369258 UBE2HP62256 183 aa15.42■□□□□ 0.06
CHD1L-202ENST00000369258 HMGN5P82970 282 aaKnown RBP15.42■□□□□ 0.06
CHD1L-202ENST00000369258 TTC6Q86TZ1 520 aa15.42■□□□□ 0.06
CHD1L-202ENST00000369258 CNTROBQ8N137 903 aa15.42■□□□□ 0.06
CHD1L-202ENST00000369258 PRIMPOLQ96LW4 560 aa15.42■□□□□ 0.06
CHD1L-202ENST00000369258 MAP3K2Q9Y2U5 619 aa15.42■□□□□ 0.06
CHD1L-202ENST00000369258 PTPRUQ92729 1446 aa15.42■□□□□ 0.06
CHD1L-202ENST00000369258 DNAAF4Q8WXU2 420 aa15.42■□□□□ 0.06
CHD1L-202ENST00000369258 PTGS1P23219 599 aa15.41■□□□□ 0.06
CHD1L-202ENST00000369258 FTOQ9C0B1 505 aaKnown RBP eCLIP15.41■□□□□ 0.06
CHD1L-202ENST00000369258 MON2Q7Z3U7 1717 aa15.41■□□□□ 0.06
CHD1L-202ENST00000369258 AOX1Q06278 1338 aa15.41■□□□□ 0.06
CHD1L-202ENST00000369258 EPB41L2O43491 1005 aaKnown RBP15.41■□□□□ 0.06
CHD1L-202ENST00000369258 BEND3Q5T5X7 828 aa15.41■□□□□ 0.06
CHD1L-202ENST00000369258 KIF1BPQ96EK5 621 aa15.41■□□□□ 0.06
CHD1L-202ENST00000369258 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.41■□□□□ 0.06
CHD1L-202ENST00000369258 A0A0D9SFI3 127 aa15.4■□□□□ 0.06
CHD1L-202ENST00000369258 RAB11FIP3O75154 756 aa15.4■□□□□ 0.06
CHD1L-202ENST00000369258 SLC39A6Q13433 755 aa15.4■□□□□ 0.06
CHD1L-202ENST00000369258 CCDC129Q6ZRS4 1044 aa15.4■□□□□ 0.06
CHD1L-202ENST00000369258 ATP6V1DQ9Y5K8 247 aa15.4■□□□□ 0.06
CHD1L-202ENST00000369258 RGPD8O14715 1765 aaPredicted RBP15.4■□□□□ 0.06
CHD1L-202ENST00000369258 JAK2O60674 1132 aa15.4■□□□□ 0.06
CHD1L-202ENST00000369258 KDM4AO75164 1064 aa15.4■□□□□ 0.06
CHD1L-202ENST00000369258 MYL6BP14649 208 aa15.4■□□□□ 0.06
CHD1L-202ENST00000369258 NMIQ13287 307 aaPredicted RBP15.4■□□□□ 0.06
CHD1L-202ENST00000369258 LARP1BQ659C4 914 aaKnown RBP15.4■□□□□ 0.06
CHD1L-202ENST00000369258 ZNF589Q86UQ0 364 aaPredicted RBP15.4■□□□□ 0.06
CHD1L-202ENST00000369258 RBM8AQ9Y5S9 174 aaKnown RBP15.4■□□□□ 0.06
CHD1L-202ENST00000369258 ITSN1Q15811 1721 aa15.4■□□□□ 0.06
CHD1L-202ENST00000369258 EAF2Q96CJ1 260 aaPredicted RBP15.39■□□□□ 0.05
CHD1L-202ENST00000369258 SIRT1Q96EB6 747 aa15.39■□□□□ 0.05
CHD1L-202ENST00000369258 SEC62Q99442 399 aaKnown RBP15.39■□□□□ 0.05
CHD1L-202ENST00000369258 ARHGEF10O15013 1369 aa15.39■□□□□ 0.05
CHD1L-202ENST00000369258 NRKQ7Z2Y5 1582 aa15.39■□□□□ 0.05
CHD1L-202ENST00000369258 IFIT2P09913 472 aaKnown RBP15.39■□□□□ 0.05
CHD1L-202ENST00000369258 ATP2B3Q16720 1220 aa15.39■□□□□ 0.05
CHD1L-202ENST00000369258 SMAP1Q8IYB5 467 aaPredicted RBP15.39■□□□□ 0.05
CHD1L-202ENST00000369258 CCDC94Q9BW85 323 aaPredicted RBP15.39■□□□□ 0.05
CHD1L-202ENST00000369258 SBNO1A3KN83 1393 aa15.39■□□□□ 0.05
CHD1L-202ENST00000369258 BTBD11A6QL63 1104 aa15.39■□□□□ 0.05
CHD1L-202ENST00000369258 KCNA6P17658 529 aa15.39■□□□□ 0.05
CHD1L-202ENST00000369258 EIF4A1P60842 406 aaKnown RBP15.39■□□□□ 0.05
CHD1L-202ENST00000369258 ADAMTS13Q76LX8 1427 aa15.38■□□□□ 0.05
CHD1L-202ENST00000369258 TMEM2Q9UHN6 1383 aa15.38■□□□□ 0.05
CHD1L-202ENST00000369258 POLA2Q14181 598 aa15.38■□□□□ 0.05
CHD1L-202ENST00000369258 ARID5BQ14865 1188 aa15.38■□□□□ 0.05
CHD1L-202ENST00000369258 LARP1Q6PKG0 1096 aaKnown RBP15.38■□□□□ 0.05
CHD1L-202ENST00000369258 DACT1Q9NYF0 836 aa15.38■□□□□ 0.05
CHD1L-202ENST00000369258 PRDM4Q9UKN5 801 aa15.38■□□□□ 0.05
CHD1L-202ENST00000369258 MAP3K5Q99683 1374 aa15.38■□□□□ 0.05
CHD1L-202ENST00000369258 CLASRPQ8N2M8 674 aaKnown RBP15.38■□□□□ 0.05
CHD1L-202ENST00000369258 SYTL4Q96C24 671 aaPredicted RBP15.38■□□□□ 0.05
CHD1L-202ENST00000369258 C16orf45Q96MC5 204 aaPredicted RBP15.38■□□□□ 0.05
CHD1L-202ENST00000369258 A0A0G2JLW4 131 aa15.37■□□□□ 0.05
CHD1L-202ENST00000369258 TEFQ10587 303 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms