RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 NBPF26B4DH59 902 aa21.3■■□□□ 1
CKS1B-202ENST00000368436 NBPF10Q6P3W6 841 aaKnown RBP21.3■■□□□ 1
CKS1B-202ENST00000368436 NBPF15Q8N660 670 aa21.3■■□□□ 1
CKS1B-202ENST00000368436 DNAJC5GQ8N7S2 189 aa21.3■■□□□ 1
CKS1B-202ENST00000368436 KDM3BQ7LBC6 1761 aa21.3■■□□□ 1
CKS1B-202ENST00000368436 GLTPD2A6NH11 291 aa21.29■■□□□ 1
CKS1B-202ENST00000368436 RGL2O15211 777 aa21.29■■□□□ 1
CKS1B-202ENST00000368436 SLX4Q8IY92 1834 aa21.29■■□□□ 1
CKS1B-202ENST00000368436 C21orf2O43822 256 aa21.28■■□□□ 1
CKS1B-202ENST00000368436 ST5P78524 1137 aa21.28■■□□□ 1
CKS1B-202ENST00000368436 STYK1Q6J9G0 422 aa21.28■■□□□ 1
CKS1B-202ENST00000368436 PLEKHF1Q96S99 279 aa21.28■■□□□ 1
CKS1B-202ENST00000368436 SRGNP10124 158 aa21.27■■□□□ 1
CKS1B-202ENST00000368436 CNKSR1Q969H4 720 aa21.27■■□□□ 1
CKS1B-202ENST00000368436 ZNF652Q9Y2D9 606 aa21.27■■□□□ 1
CKS1B-202ENST00000368436 NEFMP07197 916 aa21.26■□□□□ 0.99
CKS1B-202ENST00000368436 MIS18AQ9NYP9 233 aa21.26■□□□□ 0.99
CKS1B-202ENST00000368436 LTBP3Q9NS15 1303 aa21.26■□□□□ 0.99
CKS1B-202ENST00000368436 NPHP1O15259 732 aa21.25■□□□□ 0.99
CKS1B-202ENST00000368436 PNISRQ8TF01 805 aaKnown RBP21.25■□□□□ 0.99
CKS1B-202ENST00000368436 MASTLQ96GX5 879 aa21.25■□□□□ 0.99
CKS1B-202ENST00000368436 ZNF219Q9P2Y4 722 aaPredicted RBP21.25■□□□□ 0.99
CKS1B-202ENST00000368436 VEGFAP15692 232 aaPredicted RBP21.24■□□□□ 0.99
CKS1B-202ENST00000368436 NBPF5PQ86XG9 351 aaPredicted RBP21.24■□□□□ 0.99
CKS1B-202ENST00000368436 KLRG2A4D1S0 409 aaPredicted RBP21.23■□□□□ 0.99
CKS1B-202ENST00000368436 NFE2L2Q16236 605 aa21.23■□□□□ 0.99
CKS1B-202ENST00000368436 PRPF40BQ6NWY9 871 aaKnown RBP21.23■□□□□ 0.99
CKS1B-202ENST00000368436 SMC1BQ8NDV3 1235 aa21.23■□□□□ 0.99
CKS1B-202ENST00000368436 IFFO2Q5TF58 517 aa21.22■□□□□ 0.99
CKS1B-202ENST00000368436 TPTE2Q6XPS3 522 aa21.22■□□□□ 0.99
CKS1B-202ENST00000368436 NIP7Q9Y221 180 aaKnown RBP eCLIP21.22■□□□□ 0.99
CKS1B-202ENST00000368436 NUP98P52948 1817 aa21.22■□□□□ 0.99
CKS1B-202ENST00000368436 POTECB2RU33 542 aa21.21■□□□□ 0.99
CKS1B-202ENST00000368436 HLFQ16534 295 aa21.21■□□□□ 0.99
CKS1B-202ENST00000368436 ERFEQ4G0M1 354 aa21.21■□□□□ 0.99
CKS1B-202ENST00000368436 SOGA3Q5TF21 947 aa21.21■□□□□ 0.99
CKS1B-202ENST00000368436 C7orf43Q8WVR3 580 aa21.21■□□□□ 0.99
CKS1B-202ENST00000368436 TAOK3Q9H2K8 898 aa21.21■□□□□ 0.99
CKS1B-202ENST00000368436 PNNQ9H307 717 aaKnown RBP21.21■□□□□ 0.99
CKS1B-202ENST00000368436 NPR1P16066 1061 aa21.2■□□□□ 0.98
CKS1B-202ENST00000368436 EIF4A1P60842 406 aaKnown RBP21.2■□□□□ 0.98
CKS1B-202ENST00000368436 DPY19L2Q6NUT2 758 aa21.2■□□□□ 0.98
CKS1B-202ENST00000368436 HTRA3P83110 453 aa21.19■□□□□ 0.98
CKS1B-202ENST00000368436 THUMPD2Q9BTF0 503 aaKnown RBP21.19■□□□□ 0.98
CKS1B-202ENST00000368436 ERVV-1B6SEH8 477 aa21.18■□□□□ 0.98
CKS1B-202ENST00000368436 KLRG1Q96E93 195 aa21.17■□□□□ 0.98
CKS1B-202ENST00000368436 MAPK8IP3Q9UPT6 1336 aa21.17■□□□□ 0.98
CKS1B-202ENST00000368436 MAP3K15Q6ZN16 1313 aa21.15■□□□□ 0.98
CKS1B-202ENST00000368436 FAM177BA6PVY3 158 aa21.15■□□□□ 0.98
CKS1B-202ENST00000368436 RALBP1Q15311 655 aa21.15■□□□□ 0.98
CKS1B-202ENST00000368436 CCDC93Q567U6 631 aa21.15■□□□□ 0.98
CKS1B-202ENST00000368436 JMYQ8N9B5 988 aa21.15■□□□□ 0.98
CKS1B-202ENST00000368436 NGEFQ8N5V2 710 aa21.14■□□□□ 0.97
CKS1B-202ENST00000368436 RRP7AQ9Y3A4 280 aaKnown RBP21.14■□□□□ 0.97
CKS1B-202ENST00000368436 ERBB4Q15303 1308 aa21.13■□□□□ 0.97
CKS1B-202ENST00000368436 TTLL7Q6ZT98 887 aa21.13■□□□□ 0.97
CKS1B-202ENST00000368436 NYXQ9GZU5 481 aa21.13■□□□□ 0.97
CKS1B-202ENST00000368436 GTF2E1P29083 439 aaPredicted RBP21.12■□□□□ 0.97
CKS1B-202ENST00000368436 ALDH1B1P30837 517 aa21.12■□□□□ 0.97
CKS1B-202ENST00000368436 KIF6Q6ZMV9 814 aa21.12■□□□□ 0.97
CKS1B-202ENST00000368436 DDNO94850 711 aaPredicted RBP21.11■□□□□ 0.97
CKS1B-202ENST00000368436 MYL6BP14649 208 aa21.11■□□□□ 0.97
CKS1B-202ENST00000368436 FKBP4Q02790 459 aaKnown RBP eCLIP21.11■□□□□ 0.97
CKS1B-202ENST00000368436 CRY2Q49AN0 593 aa21.11■□□□□ 0.97
CKS1B-202ENST00000368436 SCN4AP35499 1836 aa21.11■□□□□ 0.97
CKS1B-202ENST00000368436 ABCC12Q96J65 1359 aa21.1■□□□□ 0.97
CKS1B-202ENST00000368436 IBTKQ9P2D0 1353 aaPredicted RBP21.1■□□□□ 0.97
CKS1B-202ENST00000368436 RIPK4P57078 832 aa21.1■□□□□ 0.97
CKS1B-202ENST00000368436 RTKN2Q8IZC4 609 aa21.1■□□□□ 0.97
CKS1B-202ENST00000368436 BABAM1Q9NWV8 329 aa21.1■□□□□ 0.97
CKS1B-202ENST00000368436 TSPYL4Q9UJ04 414 aa21.1■□□□□ 0.97
CKS1B-202ENST00000368436 RIC1Q4ADV7 1423 aa21.1■□□□□ 0.97
CKS1B-202ENST00000368436 OLFM4Q6UX06 510 aa21.09■□□□□ 0.97
CKS1B-202ENST00000368436 NUTM1Q86Y26 1132 aa21.09■□□□□ 0.97
CKS1B-202ENST00000368436 ZNF34Q8IZ26 560 aa21.09■□□□□ 0.97
CKS1B-202ENST00000368436 ZBTB3Q9H5J0 574 aa21.09■□□□□ 0.97
CKS1B-202ENST00000368436 SNED1Q8TER0 1413 aa21.09■□□□□ 0.97
CKS1B-202ENST00000368436 UBN2Q6ZU65 1347 aa21.08■□□□□ 0.97
CKS1B-202ENST00000368436 TMPOP42166 694 aaKnown RBP21.08■□□□□ 0.97
CKS1B-202ENST00000368436 GIGYF2Q6Y7W6 1299 aaKnown RBP21.08■□□□□ 0.97
CKS1B-202ENST00000368436 LRP10Q7Z4F1 713 aa21.08■□□□□ 0.97
CKS1B-202ENST00000368436 GPTP24298 496 aa21.07■□□□□ 0.96
CKS1B-202ENST00000368436 HOXA10P31260 410 aaPredicted RBP21.07■□□□□ 0.96
CKS1B-202ENST00000368436 PDIA6Q15084 440 aa21.07■□□□□ 0.96
CKS1B-202ENST00000368436 SUSD4Q5VX71 490 aa21.07■□□□□ 0.96
CKS1B-202ENST00000368436 L3MBTL3Q96JM7 780 aaPredicted RBP21.07■□□□□ 0.96
CKS1B-202ENST00000368436 ZNF277Q9NRM2 450 aaPredicted RBP21.07■□□□□ 0.96
CKS1B-202ENST00000368436 CHADLQ6NUI6 762 aa21.06■□□□□ 0.96
CKS1B-202ENST00000368436 LMOD3Q0VAK6 560 aa21.05■□□□□ 0.96
CKS1B-202ENST00000368436 SYNE4Q8N205 404 aa21.05■□□□□ 0.96
CKS1B-202ENST00000368436 MYBBP1AQ9BQG0 1328 aaKnown RBP21.04■□□□□ 0.96
CKS1B-202ENST00000368436 IQCA1LA6NCM1 817 aa21.04■□□□□ 0.96
CKS1B-202ENST00000368436 NTSR2O95665 410 aa21.04■□□□□ 0.96
CKS1B-202ENST00000368436 POTEIP0CG38 1075 aa21.04■□□□□ 0.96
CKS1B-202ENST00000368436 POTEJP0CG39 1038 aa21.04■□□□□ 0.96
CKS1B-202ENST00000368436 IARSP41252 1262 aaKnown RBP21.04■□□□□ 0.96
CKS1B-202ENST00000368436 DDX10Q13206 875 aaKnown RBP21.04■□□□□ 0.96
CKS1B-202ENST00000368436 CC2D2BQ6DHV5 1058 aa21.04■□□□□ 0.96
CKS1B-202ENST00000368436 PSMD1Q99460 953 aa21.04■□□□□ 0.96
CKS1B-202ENST00000368436 ZNF541Q9H0D2 1346 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms