RNA–Protein interactions for RNA: ENST00000367142.4

NUCKS1-201, Transcript of nuclear casein kinase and cyclin dependent kinase substrate 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUCKS1, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1-201ENST00000367142 RBM10P98175 930 aaKnown RBP18.13■□□□□ 0.49
NUCKS1-201ENST00000367142 FERP16591 822 aa18.13■□□□□ 0.49
NUCKS1-201ENST00000367142 GPTP24298 496 aa18.13■□□□□ 0.49
NUCKS1-201ENST00000367142 TROQ12816 1431 aaPredicted RBP18.13■□□□□ 0.49
NUCKS1-201ENST00000367142 ALDH1L2Q3SY69 923 aa18.13■□□□□ 0.49
NUCKS1-201ENST00000367142 TCERG1LQ5VWI1 586 aa18.13■□□□□ 0.49
NUCKS1-201ENST00000367142 CCDC8Q9H0W5 538 aaPredicted RBP18.13■□□□□ 0.49
NUCKS1-201ENST00000367142 DBF4Q9UBU7 674 aaPredicted RBP18.13■□□□□ 0.49
NUCKS1-201ENST00000367142 TSPY2A6NKD2 308 aa18.13■□□□□ 0.49
NUCKS1-201ENST00000367142 CTAGE5O15320 804 aa18.12■□□□□ 0.49
NUCKS1-201ENST00000367142 PUF60Q9UHX1 559 aaKnown RBP18.12■□□□□ 0.49
NUCKS1-201ENST00000367142 PRC1O43663 620 aa18.12■□□□□ 0.49
NUCKS1-201ENST00000367142 CCDC174Q6PII3 467 aa18.12■□□□□ 0.49
NUCKS1-201ENST00000367142 PPP4R3BQ5MIZ7 849 aa18.12■□□□□ 0.49
NUCKS1-201ENST00000367142 TMCO3Q6UWJ1 677 aa18.12■□□□□ 0.49
NUCKS1-201ENST00000367142 PRKCSHP14314 528 aaPredicted RBP18.12■□□□□ 0.49
NUCKS1-201ENST00000367142 TRAF1Q13077 416 aa18.12■□□□□ 0.49
NUCKS1-201ENST00000367142 KIF4BQ2VIQ3 1234 aa18.12■□□□□ 0.49
NUCKS1-201ENST00000367142 POLA1P09884 1462 aaPredicted RBP18.11■□□□□ 0.49
NUCKS1-201ENST00000367142 TNNT1P13805 278 aa18.11■□□□□ 0.49
NUCKS1-201ENST00000367142 CEP63Q96MT8 703 aa18.11■□□□□ 0.49
NUCKS1-201ENST00000367142 PSMD1Q99460 953 aa18.11■□□□□ 0.49
NUCKS1-201ENST00000367142 UBE4AQ14139 1066 aa18.11■□□□□ 0.49
NUCKS1-201ENST00000367142 VTI1AQ96AJ9 217 aa18.11■□□□□ 0.49
NUCKS1-201ENST00000367142 UTP14AQ9BVJ6 771 aaKnown RBP18.11■□□□□ 0.49
NUCKS1-201ENST00000367142 CWC25Q9NXE8 425 aaPredicted RBP18.11■□□□□ 0.49
NUCKS1-201ENST00000367142 TBCAO75347 108 aaKnown RBP18.11■□□□□ 0.49
NUCKS1-201ENST00000367142 VAT1LQ9HCJ6 419 aa18.11■□□□□ 0.49
NUCKS1-201ENST00000367142 EFCAB5A4FU69 1503 aa18.11■□□□□ 0.49
NUCKS1-201ENST00000367142 ABCC11Q96J66 1382 aa18.11■□□□□ 0.49
NUCKS1-201ENST00000367142 SMARCA5O60264 1052 aaPredicted RBP18.11■□□□□ 0.49
NUCKS1-201ENST00000367142 NAA15Q9BXJ9 866 aaKnown RBP18.11■□□□□ 0.49
NUCKS1-201ENST00000367142 ZBTB3Q9H5J0 574 aa18.11■□□□□ 0.49
NUCKS1-201ENST00000367142 UQCRHLA0A096LP55 91 aa18.1■□□□□ 0.49
NUCKS1-201ENST00000367142 UQCRHP07919 91 aa18.1■□□□□ 0.49
NUCKS1-201ENST00000367142 CRNKL1Q9BZJ0 848 aaKnown RBP18.1■□□□□ 0.49
NUCKS1-201ENST00000367142 ACTN2P35609 894 aa18.1■□□□□ 0.49
NUCKS1-201ENST00000367142 LMAN1P49257 510 aa18.1■□□□□ 0.49
NUCKS1-201ENST00000367142 DNA2P51530 1060 aa18.1■□□□□ 0.49
NUCKS1-201ENST00000367142 ERMNQ8TAM6 284 aa18.1■□□□□ 0.49
NUCKS1-201ENST00000367142 GUCY1B3Q02153 619 aa18.1■□□□□ 0.49
NUCKS1-201ENST00000367142 CCDC183Q5T5S1 534 aa18.1■□□□□ 0.49
NUCKS1-201ENST00000367142 WAPLQ7Z5K2 1190 aa18.1■□□□□ 0.49
NUCKS1-201ENST00000367142 TMEM67Q5HYA8 995 aa18.1■□□□□ 0.49
NUCKS1-201ENST00000367142 IFNL2Q8IZJ0 200 aa18.1■□□□□ 0.49
NUCKS1-201ENST00000367142 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.09■□□□□ 0.493e-6■□□□□ 10.7
NUCKS1-201ENST00000367142 PTPN14Q15678 1187 aa18.09■□□□□ 0.49
NUCKS1-201ENST00000367142 TRMT1LQ7Z2T5 733 aaKnown RBP18.09■□□□□ 0.49
NUCKS1-201ENST00000367142 IDEP14735 1019 aa18.09■□□□□ 0.49
NUCKS1-201ENST00000367142 MAP3K9P80192 1104 aa18.09■□□□□ 0.49
NUCKS1-201ENST00000367142 EVI5LQ96CN4 794 aa18.09■□□□□ 0.49
NUCKS1-201ENST00000367142 MFSD6Q6ZSS7 791 aa18.09■□□□□ 0.49
NUCKS1-201ENST00000367142 TMCO5BA8MYB1 307 aa18.09■□□□□ 0.49
NUCKS1-201ENST00000367142 USP37Q86T82 979 aa18.09■□□□□ 0.49
NUCKS1-201ENST00000367142 MRPS9P82933 396 aaKnown RBP18.08■□□□□ 0.49
NUCKS1-201ENST00000367142 CLEC11AQ9Y240 323 aa18.08■□□□□ 0.49
NUCKS1-201ENST00000367142 CCDC172P0C7W6 258 aa18.08■□□□□ 0.49
NUCKS1-201ENST00000367142 LDHAL6AQ6ZMR3 332 aa18.08■□□□□ 0.49
NUCKS1-201ENST00000367142 NBPF6Q5VWK0 638 aa18.08■□□□□ 0.48
NUCKS1-201ENST00000367142 NBPF5PQ86XG9 351 aaPredicted RBP18.08■□□□□ 0.48
NUCKS1-201ENST00000367142 NBPF4Q96M43 638 aa18.08■□□□□ 0.48
NUCKS1-201ENST00000367142 IARSP41252 1262 aaKnown RBP18.08■□□□□ 0.48
NUCKS1-201ENST00000367142 CCDC152Q4G0S7 254 aa18.08■□□□□ 0.48
NUCKS1-201ENST00000367142 KRT28Q7Z3Y7 464 aa18.08■□□□□ 0.48
NUCKS1-201ENST00000367142 C16orf71Q8IYS4 520 aaPredicted RBP18.08■□□□□ 0.48
NUCKS1-201ENST00000367142 SYCE3A1L190 88 aa18.08■□□□□ 0.48
NUCKS1-201ENST00000367142 UQCRFS1P1P0C7P4 283 aa18.08■□□□□ 0.48
NUCKS1-201ENST00000367142 FSD2A1L4K1 749 aa18.07■□□□□ 0.48
NUCKS1-201ENST00000367142 STX6O43752 255 aa18.07■□□□□ 0.48
NUCKS1-201ENST00000367142 CCDC141Q6ZP82 1450 aa18.07■□□□□ 0.48
NUCKS1-201ENST00000367142 CKAP2LQ8IYA6 745 aa18.07■□□□□ 0.48
NUCKS1-201ENST00000367142 AMOTL2Q9Y2J4 779 aa18.07■□□□□ 0.48
NUCKS1-201ENST00000367142 FOXO3O43524 673 aa18.07■□□□□ 0.48
NUCKS1-201ENST00000367142 THUMPD2Q9BTF0 503 aaKnown RBP18.07■□□□□ 0.48
NUCKS1-201ENST00000367142 SYNCQ9H7C4 482 aa18.07■□□□□ 0.48
NUCKS1-201ENST00000367142 BCCIPQ9P287 314 aaKnown RBP eCLIP18.07■□□□□ 0.48
NUCKS1-201ENST00000367142 NAIPQ13075 1403 aa18.07■□□□□ 0.48
NUCKS1-201ENST00000367142 ZNF354CQ86Y25 554 aa18.06■□□□□ 0.48
NUCKS1-201ENST00000367142 ZGPATQ8N5A5 531 aaKnown RBP18.06■□□□□ 0.48
NUCKS1-201ENST00000367142 KANK3Q6NY19 840 aa18.06■□□□□ 0.48
NUCKS1-201ENST00000367142 NME9Q86XW9 330 aa18.06■□□□□ 0.48
NUCKS1-201ENST00000367142 DDX12PQ92771 950 aa18.06■□□□□ 0.48
NUCKS1-201ENST00000367142 PDCL2Q8N4E4 241 aa18.06■□□□□ 0.48
NUCKS1-201ENST00000367142 SLFN5Q08AF3 891 aa18.06■□□□□ 0.48
NUCKS1-201ENST00000367142 GOLIM4O00461 696 aa18.05■□□□□ 0.48
NUCKS1-201ENST00000367142 MAP3K2Q9Y2U5 619 aa18.05■□□□□ 0.48
NUCKS1-201ENST00000367142 PTPRCP08575 1304 aa18.05■□□□□ 0.48
NUCKS1-201ENST00000367142 B4DLN1 442 aa18.05■□□□□ 0.48
NUCKS1-201ENST00000367142 UBA7P41226 1012 aa18.05■□□□□ 0.48
NUCKS1-201ENST00000367142 MRPL12P52815 198 aaKnown RBP18.05■□□□□ 0.48
NUCKS1-201ENST00000367142 CPLX3Q8WVH0 158 aa18.05■□□□□ 0.48
NUCKS1-201ENST00000367142 LIMCH1Q9UPQ0 1083 aa18.05■□□□□ 0.48
NUCKS1-201ENST00000367142 AKNAQ7Z591 1439 aa18.05■□□□□ 0.48
NUCKS1-201ENST00000367142 SNAPC4Q5SXM2 1469 aa18.05■□□□□ 0.48
NUCKS1-201ENST00000367142 SREK1Q8WXA9 508 aaKnown RBP18.05■□□□□ 0.48
NUCKS1-201ENST00000367142 BACH2Q9BYV9 841 aa18.05■□□□□ 0.48
NUCKS1-201ENST00000367142 CCT2P78371 535 aaKnown RBP18.05■□□□□ 0.48
NUCKS1-201ENST00000367142 GRM1Q13255 1194 aa18.05■□□□□ 0.48
NUCKS1-201ENST00000367142 TBC1D5Q92609 795 aa18.05■□□□□ 0.48
NUCKS1-201ENST00000367142 TTC21BQ7Z4L5 1316 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms