RNA–Protein interactions for RNA: ENST00000364054.1

RNU6-1048P-201, Transcript of RNA, U6 small nuclear 1048, pseudogene, humanhuman

BASIC

Gene RNU6-1048P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1048P-201ENST00000364054 M0R2N6 131 aa4.19□□□□□ -1.74
RNU6-1048P-201ENST00000364054 EFSO43281 561 aa4.19□□□□□ -1.74
RNU6-1048P-201ENST00000364054 PSMA6P60900 246 aaKnown RBP4.19□□□□□ -1.74
RNU6-1048P-201ENST00000364054 NCOA4Q13772 614 aa4.19□□□□□ -1.74
RNU6-1048P-201ENST00000364054 FCHSD1Q86WN1 690 aa4.19□□□□□ -1.74
RNU6-1048P-201ENST00000364054 PLEKHM2Q8IWE5 1019 aa4.19□□□□□ -1.74
RNU6-1048P-201ENST00000364054 LARGE2Q8N3Y3 721 aa4.19□□□□□ -1.74
RNU6-1048P-201ENST00000364054 RHPN1Q8TCX5 695 aa4.19□□□□□ -1.74
RNU6-1048P-201ENST00000364054 ZNF358Q9NW07 568 aa4.19□□□□□ -1.74
RNU6-1048P-201ENST00000364054 COG6Q9Y2V7 657 aa4.19□□□□□ -1.74
RNU6-1048P-201ENST00000364054 PALM3A6NDB9 673 aaPredicted RBP4.18□□□□□ -1.74
RNU6-1048P-201ENST00000364054 ADARB2-AS1A8MUL3 147 aa4.18□□□□□ -1.74
RNU6-1048P-201ENST00000364054 UBTFP17480 764 aaKnown RBP4.18□□□□□ -1.74
RNU6-1048P-201ENST00000364054 HOXB4P17483 251 aaPredicted RBP4.18□□□□□ -1.74
RNU6-1048P-201ENST00000364054 HIRAP54198 1017 aaPredicted RBP4.18□□□□□ -1.74
RNU6-1048P-201ENST00000364054 TRIM28Q13263 835 aaKnown RBP4.18□□□□□ -1.74
RNU6-1048P-201ENST00000364054 PCSK7Q16549 785 aa4.18□□□□□ -1.74
RNU6-1048P-201ENST00000364054 LRRC69Q6ZNQ3 347 aa4.18□□□□□ -1.74
RNU6-1048P-201ENST00000364054 SYT9Q86SS6 491 aa4.18□□□□□ -1.74
RNU6-1048P-201ENST00000364054 SLC9A9Q8IVB4 645 aa4.18□□□□□ -1.74
RNU6-1048P-201ENST00000364054 ZNF295-AS1Q8N0V1 137 aa4.18□□□□□ -1.74
RNU6-1048P-201ENST00000364054 GAS2L2Q8NHY3 880 aa4.18□□□□□ -1.74
RNU6-1048P-201ENST00000364054 PRDM6Q9NQX0 595 aa4.18□□□□□ -1.74
RNU6-1048P-201ENST00000364054 EML1O00423 815 aa4.17□□□□□ -1.74
RNU6-1048P-201ENST00000364054 TBC1D8BQ0IIM8 1120 aa4.17□□□□□ -1.74
RNU6-1048P-201ENST00000364054 SERBP1Q8NC51 408 aaKnown RBP eCLIP4.17□□□□□ -1.74
RNU6-1048P-201ENST00000364054 TPCN2Q8NHX9 752 aa4.17□□□□□ -1.74
RNU6-1048P-201ENST00000364054 TNFRSF25Q93038 417 aa4.17□□□□□ -1.74
RNU6-1048P-201ENST00000364054 TRIM11Q96F44 468 aa4.17□□□□□ -1.74
RNU6-1048P-201ENST00000364054 M0R082 166 aa4.16□□□□□ -1.74
RNU6-1048P-201ENST00000364054 PIK3CDO00329 1044 aa4.16□□□□□ -1.74
RNU6-1048P-201ENST00000364054 TXLNAP40222 546 aa4.16□□□□□ -1.74
RNU6-1048P-201ENST00000364054 SPEM2Q0P670 501 aa4.16□□□□□ -1.74
RNU6-1048P-201ENST00000364054 CCDC102BQ68D86 513 aa4.16□□□□□ -1.74
RNU6-1048P-201ENST00000364054 STAG2Q8N3U4 1231 aa4.16□□□□□ -1.74
RNU6-1048P-201ENST00000364054 ZNF417Q8TAU3 575 aa4.16□□□□□ -1.74
RNU6-1048P-201ENST00000364054 CEP63Q96MT8 703 aa4.16□□□□□ -1.74
RNU6-1048P-201ENST00000364054 ZNF587Q96SQ5 575 aaPredicted RBP4.16□□□□□ -1.74
RNU6-1048P-201ENST00000364054 STRN4Q9NRL3 753 aa4.16□□□□□ -1.74
RNU6-1048P-201ENST00000364054 KLF15Q9UIH9 416 aa4.16□□□□□ -1.74
RNU6-1048P-201ENST00000364054 KCNH4Q9UQ05 1017 aa4.16□□□□□ -1.74
RNU6-1048P-201ENST00000364054 USP3Q9Y6I4 520 aa4.16□□□□□ -1.74
RNU6-1048P-201ENST00000364054 USP17L3A6NCW0 530 aa4.15□□□□□ -1.75
RNU6-1048P-201ENST00000364054 USP17L4A6NCW7 530 aa4.15□□□□□ -1.75
RNU6-1048P-201ENST00000364054 C9orf172C9J069 976 aa4.15□□□□□ -1.75
RNU6-1048P-201ENST00000364054 FAM229AH3BQW9 127 aa4.15□□□□□ -1.75
RNU6-1048P-201ENST00000364054 ATP9BO43861 1147 aa4.15□□□□□ -1.75
RNU6-1048P-201ENST00000364054 LILRB5O75023 590 aa4.15□□□□□ -1.75
RNU6-1048P-201ENST00000364054 EPB42P16452 691 aa4.15□□□□□ -1.75
RNU6-1048P-201ENST00000364054 ARID4AP29374 1257 aaPredicted RBP4.15□□□□□ -1.75
RNU6-1048P-201ENST00000364054 EPHA4P54764 986 aa4.15□□□□□ -1.75
RNU6-1048P-201ENST00000364054 KCNQ4P56696 695 aa4.15□□□□□ -1.75
RNU6-1048P-201ENST00000364054 RAC1P63000 192 aa4.15□□□□□ -1.75
RNU6-1048P-201ENST00000364054 NRG1Q02297 640 aaPredicted RBP4.15□□□□□ -1.75
RNU6-1048P-201ENST00000364054 TBCELQ5QJ74 424 aa4.15□□□□□ -1.75
RNU6-1048P-201ENST00000364054 USP17L2Q6R6M4 530 aa4.15□□□□□ -1.75
RNU6-1048P-201ENST00000364054 USP17L1Q7RTZ2 530 aa4.15□□□□□ -1.75
RNU6-1048P-201ENST00000364054 NBPF11Q86T75 865 aa4.15□□□□□ -1.75
RNU6-1048P-201ENST00000364054 TNS4Q8IZW8 715 aa4.15□□□□□ -1.75
RNU6-1048P-201ENST00000364054 BRD7Q9NPI1 651 aa4.15□□□□□ -1.75
RNU6-1048P-201ENST00000364054 PPP1R12BO60237 982 aaPredicted RBP4.14□□□□□ -1.75
RNU6-1048P-201ENST00000364054 ADH7P40394 386 aa4.14□□□□□ -1.75
RNU6-1048P-201ENST00000364054 LARP1Q6PKG0 1096 aaKnown RBP4.14□□□□□ -1.75
RNU6-1048P-201ENST00000364054 SIX5Q8N196 739 aa4.14□□□□□ -1.75
RNU6-1048P-201ENST00000364054 DEPDC4Q8N2C3 294 aa4.14□□□□□ -1.75
RNU6-1048P-201ENST00000364054 OGFOD1Q8N543 542 aa4.14□□□□□ -1.75
RNU6-1048P-201ENST00000364054 ZDHHC1Q8WTX9 485 aa4.14□□□□□ -1.75
RNU6-1048P-201ENST00000364054 PNMA5Q96PV4 448 aa4.14□□□□□ -1.75
RNU6-1048P-201ENST00000364054 PSMG3-AS1Q96PY0 264 aa4.14□□□□□ -1.75
RNU6-1048P-201ENST00000364054 IGFLR1Q9H665 355 aa4.14□□□□□ -1.75
RNU6-1048P-201ENST00000364054 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.14□□□□□ -1.75
RNU6-1048P-201ENST00000364054 MKRN1Q9UHC7 482 aaKnown RBP4.14□□□□□ -1.75
RNU6-1048P-201ENST00000364054 SFI1A8K8P3 1242 aa4.13□□□□□ -1.75
RNU6-1048P-201ENST00000364054 SEC13P55735 322 aa4.13□□□□□ -1.75
RNU6-1048P-201ENST00000364054 TRAPPC3LQ5T215 181 aa4.13□□□□□ -1.75
RNU6-1048P-201ENST00000364054 HDGFL1Q5TGJ6 251 aa4.13□□□□□ -1.75
RNU6-1048P-201ENST00000364054 IER5Q5VY09 327 aa4.13□□□□□ -1.75
RNU6-1048P-201ENST00000364054 RAB44Q7Z6P3 723 aaPredicted RBP4.13□□□□□ -1.75
RNU6-1048P-201ENST00000364054 DCAF11Q8TEB1 546 aa4.13□□□□□ -1.75
RNU6-1048P-201ENST00000364054 PHACTR1Q9C0D0 580 aa4.13□□□□□ -1.75
RNU6-1048P-201ENST00000364054 C11orf16Q9NQ32 467 aa4.13□□□□□ -1.75
RNU6-1048P-201ENST00000364054 TPSG1Q9NRR2 321 aa4.13□□□□□ -1.75
RNU6-1048P-201ENST00000364054 ALBP02768 609 aa4.12□□□□□ -1.75
RNU6-1048P-201ENST00000364054 ELNP15502 786 aa4.12□□□□□ -1.75
RNU6-1048P-201ENST00000364054 RASA1P20936 1047 aa4.12□□□□□ -1.75
RNU6-1048P-201ENST00000364054 SFSWAPQ12872 951 aaKnown RBP4.12□□□□□ -1.75
RNU6-1048P-201ENST00000364054 RSPO4Q2I0M5 234 aaPredicted RBP4.12□□□□□ -1.75
RNU6-1048P-201ENST00000364054 POTEAQ6S8J7 498 aa4.12□□□□□ -1.75
RNU6-1048P-201ENST00000364054 MICALL1Q8N3F8 863 aa4.12□□□□□ -1.75
RNU6-1048P-201ENST00000364054 SUSD3Q96L08 255 aa4.12□□□□□ -1.75
RNU6-1048P-201ENST00000364054 SLC30A3Q99726 388 aa4.12□□□□□ -1.75
RNU6-1048P-201ENST00000364054 UBE2OQ9C0C9 1292 aaKnown RBP4.12□□□□□ -1.75
RNU6-1048P-201ENST00000364054 TSPAN10Q9H1Z9 355 aaPredicted RBP4.12□□□□□ -1.75
RNU6-1048P-201ENST00000364054 HCN4Q9Y3Q4 1203 aa4.12□□□□□ -1.75
RNU6-1048P-201ENST00000364054 ZBTB7BO15156 539 aaPredicted RBP4.11□□□□□ -1.75
RNU6-1048P-201ENST00000364054 DYRK3O43781 588 aa4.11□□□□□ -1.75
RNU6-1048P-201ENST00000364054 TYRO3Q06418 890 aa4.11□□□□□ -1.75
RNU6-1048P-201ENST00000364054 GRIK4Q16099 956 aa4.11□□□□□ -1.75
RNU6-1048P-201ENST00000364054 RTN1Q16799 776 aa4.11□□□□□ -1.75
RNU6-1048P-201ENST00000364054 BTLAQ7Z6A9 289 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms