RNA–Protein interactions for RNA: ENST00000361655.6

PCDH11X-202, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-202ENST00000361655 ANKRD18BA2A2Z9 1011 aa6.66□□□□□ -1.34
PCDH11X-202ENST00000361655 KDM4AO75164 1064 aa6.66□□□□□ -1.34
PCDH11X-202ENST00000361655 ATP8B2P98198 1209 aa6.66□□□□□ -1.34
PCDH11X-202ENST00000361655 OTUD7AQ8TE49 926 aaPredicted RBP6.66□□□□□ -1.34
PCDH11X-202ENST00000361655 CHMP4CQ96CF2 233 aa6.66□□□□□ -1.34
PCDH11X-202ENST00000361655 ALDH1L1O75891 902 aa6.66□□□□□ -1.34
PCDH11X-202ENST00000361655 APBA3O96018 575 aa6.66□□□□□ -1.34
PCDH11X-202ENST00000361655 ZNF594Q96JF6 807 aaPredicted RBP6.66□□□□□ -1.34
PCDH11X-202ENST00000361655 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.66□□□□□ -1.34
PCDH11X-202ENST00000361655 ANKIB1Q9P2G1 1089 aa6.66□□□□□ -1.34
PCDH11X-202ENST00000361655 TRPC5Q9UL62 973 aaPredicted RBP6.66□□□□□ -1.34
PCDH11X-202ENST00000361655 MTMR7Q9Y216 660 aa6.66□□□□□ -1.34
PCDH11X-202ENST00000361655 SMIM5Q71RC9 77 aa6.65□□□□□ -1.34
PCDH11X-202ENST00000361655 SEPT12Q8IYM1 358 aa6.65□□□□□ -1.34
PCDH11X-202ENST00000361655 GZF1Q9H116 711 aaPredicted RBP6.65□□□□□ -1.34
PCDH11X-202ENST00000361655 ZBTB1Q9Y2K1 713 aa6.65□□□□□ -1.34
PCDH11X-202ENST00000361655 LOC102724428A0A0B4J2F2 783 aa6.65□□□□□ -1.34
PCDH11X-202ENST00000361655 IRS4O14654 1257 aaPredicted RBP6.65□□□□□ -1.34
PCDH11X-202ENST00000361655 NEK4P51957 841 aa6.65□□□□□ -1.34
PCDH11X-202ENST00000361655 SIK1P57059 783 aa6.65□□□□□ -1.34
PCDH11X-202ENST00000361655 HDAC1Q13547 482 aaPredicted RBP6.65□□□□□ -1.34
PCDH11X-202ENST00000361655 METTL22Q9BUU2 404 aaPredicted RBP6.65□□□□□ -1.34
PCDH11X-202ENST00000361655 BABAM1Q9NWV8 329 aa6.65□□□□□ -1.34
PCDH11X-202ENST00000361655 SOS2Q07890 1332 aaPredicted RBP6.65□□□□□ -1.34
PCDH11X-202ENST00000361655 FOSBP53539 338 aa6.65□□□□□ -1.35
PCDH11X-202ENST00000361655 LRRFIP1Q32MZ4 808 aaKnown RBP6.65□□□□□ -1.35
PCDH11X-202ENST00000361655 USP44Q9H0E7 712 aa6.65□□□□□ -1.35
PCDH11X-202ENST00000361655 MST1RQ04912 1400 aa6.65□□□□□ -1.35
PCDH11X-202ENST00000361655 IFIT1P09914 478 aaKnown RBP6.65□□□□□ -1.35
PCDH11X-202ENST00000361655 PLBD2Q8NHP8 589 aa6.65□□□□□ -1.35
PCDH11X-202ENST00000361655 SUCLG2Q96I99 432 aa6.65□□□□□ -1.35
PCDH11X-202ENST00000361655 KIF24Q5T7B8 1368 aa6.64□□□□□ -1.35
PCDH11X-202ENST00000361655 RAB11FIP3O75154 756 aa6.64□□□□□ -1.35
PCDH11X-202ENST00000361655 HOXB7P09629 217 aa6.64□□□□□ -1.35
PCDH11X-202ENST00000361655 NUCB1Q02818 461 aa6.64□□□□□ -1.35
PCDH11X-202ENST00000361655 ZNF622Q969S3 477 aaKnown RBP eCLIP6.64□□□□□ -1.35
PCDH11X-202ENST00000361655 NOL10Q9BSC4 688 aaKnown RBP6.64□□□□□ -1.35
PCDH11X-202ENST00000361655 CCDC87Q9NVE4 849 aa6.64□□□□□ -1.35
PCDH11X-202ENST00000361655 LRRC7Q96NW7 1537 aa6.64□□□□□ -1.35
PCDH11X-202ENST00000361655 TIMM10P62072 90 aa6.64□□□□□ -1.35
PCDH11X-202ENST00000361655 GNL2Q13823 731 aaKnown RBP6.64□□□□□ -1.35
PCDH11X-202ENST00000361655 RRP12Q5JTH9 1297 aaKnown RBP6.64□□□□□ -1.35
PCDH11X-202ENST00000361655 TRAPPC3LQ5T215 181 aa6.64□□□□□ -1.35
PCDH11X-202ENST00000361655 RPGRQ92834 1020 aaKnown RBP6.64□□□□□ -1.35
PCDH11X-202ENST00000361655 RAI14Q9P0K7 980 aa6.64□□□□□ -1.35
PCDH11X-202ENST00000361655 LRP2BPQ9P2M1 347 aa6.64□□□□□ -1.35
PCDH11X-202ENST00000361655 RNF123Q5XPI4 1314 aa6.64□□□□□ -1.35
PCDH11X-202ENST00000361655 NEURL4Q96JN8 1562 aa6.64□□□□□ -1.35
PCDH11X-202ENST00000361655 C6orf229H3BNL8 230 aa6.64□□□□□ -1.35
PCDH11X-202ENST00000361655 GOLIM4O00461 696 aa6.64□□□□□ -1.35
PCDH11X-202ENST00000361655 GLRX3O76003 335 aaKnown RBP6.64□□□□□ -1.35
PCDH11X-202ENST00000361655 GCKRQ14397 625 aa6.64□□□□□ -1.35
PCDH11X-202ENST00000361655 DDX46Q7L014 1031 aaKnown RBP6.64□□□□□ -1.35
PCDH11X-202ENST00000361655 UTP14AQ9BVJ6 771 aaKnown RBP6.64□□□□□ -1.35
PCDH11X-202ENST00000361655 DCTPP1Q9H773 170 aa6.64□□□□□ -1.35
PCDH11X-202ENST00000361655 TULP1O00294 542 aaPredicted RBP6.63□□□□□ -1.35
PCDH11X-202ENST00000361655 JAG2Q9Y219 1238 aa6.63□□□□□ -1.35
PCDH11X-202ENST00000361655 NDUFB9Q9Y6M9 179 aa6.63□□□□□ -1.35
PCDH11X-202ENST00000361655 SAMD1Q6SPF0 538 aaPredicted RBP6.63□□□□□ -1.35
PCDH11X-202ENST00000361655 NLRP3Q96P20 1036 aa6.63□□□□□ -1.35
PCDH11X-202ENST00000361655 UPF3BQ9BZI7 483 aaKnown RBP6.63□□□□□ -1.35
PCDH11X-202ENST00000361655 ECHDC1Q9NTX5 307 aa6.63□□□□□ -1.35
PCDH11X-202ENST00000361655 MAP2P11137 1827 aaKnown RBP6.63□□□□□ -1.35
PCDH11X-202ENST00000361655 MED14O60244 1454 aa6.63□□□□□ -1.35
PCDH11X-202ENST00000361655 GOLGA6L4A6NEF3 574 aa6.63□□□□□ -1.35
PCDH11X-202ENST00000361655 TFCP2Q12800 502 aa6.63□□□□□ -1.35
PCDH11X-202ENST00000361655 TRDNQ13061 729 aa6.63□□□□□ -1.35
PCDH11X-202ENST00000361655 NCBP3Q53F19 620 aaKnown RBP6.63□□□□□ -1.35
PCDH11X-202ENST00000361655 RNF20Q5VTR2 975 aa6.63□□□□□ -1.35
PCDH11X-202ENST00000361655 MSL1Q68DK7 614 aa6.63□□□□□ -1.35
PCDH11X-202ENST00000361655 LARP6Q9BRS8 491 aaKnown RBP6.63□□□□□ -1.35
PCDH11X-202ENST00000361655 GNL3LQ9NVN8 582 aaKnown RBP6.63□□□□□ -1.35
PCDH11X-202ENST00000361655 NEURL1BA8MQ27 555 aa6.62□□□□□ -1.35
PCDH11X-202ENST00000361655 SDSP20132 328 aa6.62□□□□□ -1.35
PCDH11X-202ENST00000361655 CRKLP46109 303 aaKnown RBP6.62□□□□□ -1.35
PCDH11X-202ENST00000361655 PDE1AP54750 535 aa6.62□□□□□ -1.35
PCDH11X-202ENST00000361655 TBC1D9Q6ZT07 1266 aa6.62□□□□□ -1.35
PCDH11X-202ENST00000361655 BEND3Q5T5X7 828 aa6.62□□□□□ -1.35
PCDH11X-202ENST00000361655 TPTE2Q6XPS3 522 aa6.62□□□□□ -1.35
PCDH11X-202ENST00000361655 SMC5Q8IY18 1101 aa6.62□□□□□ -1.35
PCDH11X-202ENST00000361655 ATG3Q9NT62 314 aa6.62□□□□□ -1.35
PCDH11X-202ENST00000361655 AKAP2Q9Y2D5 859 aa6.62□□□□□ -1.35
PCDH11X-202ENST00000361655 RXRBP28702 533 aa6.62□□□□□ -1.35
PCDH11X-202ENST00000361655 CCDC152Q4G0S7 254 aa6.62□□□□□ -1.35
PCDH11X-202ENST00000361655 KRT27Q7Z3Y8 459 aa6.62□□□□□ -1.35
PCDH11X-202ENST00000361655 RALYLQ86SE5 291 aaKnown RBP6.62□□□□□ -1.35
PCDH11X-202ENST00000361655 ABCC4O15439 1325 aa6.61□□□□□ -1.35
PCDH11X-202ENST00000361655 RBM5P52756 815 aaKnown RBP eCLIP6.61□□□□□ -1.35
PCDH11X-202ENST00000361655 PLCB2Q00722 1185 aa6.61□□□□□ -1.35
PCDH11X-202ENST00000361655 SLC4A8Q2Y0W8 1093 aa6.61□□□□□ -1.35
PCDH11X-202ENST00000361655 NFXL1Q6ZNB6 911 aa6.61□□□□□ -1.35
PCDH11X-202ENST00000361655 ANP32BQ92688 251 aaKnown RBP6.61□□□□□ -1.35
PCDH11X-202ENST00000361655 SH3TC1Q8TE82 1336 aa6.61□□□□□ -1.35
PCDH11X-202ENST00000361655 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.61□□□□□ -1.35
PCDH11X-202ENST00000361655 SEC24BO95487 1268 aa6.61□□□□□ -1.35
PCDH11X-202ENST00000361655 STK3Q13188 491 aa6.61□□□□□ -1.35
PCDH11X-202ENST00000361655 TCIRG1Q13488 830 aa6.61□□□□□ -1.35
PCDH11X-202ENST00000361655 ATP2B3Q16720 1220 aa6.61□□□□□ -1.35
PCDH11X-202ENST00000361655 TTC22Q5TAA0 569 aa6.61□□□□□ -1.35
PCDH11X-202ENST00000361655 FAM196AQ6ZSG2 479 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms