RNA–Protein interactions for RNA: ENST00000360428.8

DSC3-201, Transcript of desmocollin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DSC3, Length 6,939 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSC3-201ENST00000360428 ATAD2Q6PL18 1390 aa6.78□□□□□ -1.32
DSC3-201ENST00000360428 FAM177BA6PVY3 158 aa6.78□□□□□ -1.32
DSC3-201ENST00000360428 NAP1L3Q99457 506 aaPredicted RBP6.78□□□□□ -1.32
DSC3-201ENST00000360428 NKTRP30414 1462 aaKnown RBP6.78□□□□□ -1.32
DSC3-201ENST00000360428 ZSCAN29Q8IWY8 852 aaPredicted RBP6.78□□□□□ -1.32
DSC3-201ENST00000360428 TCP11L1Q9NUJ3 509 aa6.78□□□□□ -1.32
DSC3-201ENST00000360428 KIAA1107Q9UPP5 1409 aa6.78□□□□□ -1.32
DSC3-201ENST00000360428 CAVIN4Q5BKX8 364 aa6.78□□□□□ -1.32
DSC3-201ENST00000360428 SULT6B1Q6IMI4 303 aa6.78□□□□□ -1.32
DSC3-201ENST00000360428 TRMT1Q9NXH9 659 aaKnown RBP6.78□□□□□ -1.32
DSC3-201ENST00000360428 IGF1RP08069 1367 aa6.77□□□□□ -1.32
DSC3-201ENST00000360428 ZWINTO95229 277 aa6.77□□□□□ -1.33
DSC3-201ENST00000360428 BMP15O95972 392 aa6.77□□□□□ -1.33
DSC3-201ENST00000360428 NOP2P46087 812 aaKnown RBP6.77□□□□□ -1.33
DSC3-201ENST00000360428 SLFN5Q08AF3 891 aa6.77□□□□□ -1.33
DSC3-201ENST00000360428 NFE2L2Q16236 605 aa6.77□□□□□ -1.33
DSC3-201ENST00000360428 CCDC40Q4G0X9 1142 aa6.77□□□□□ -1.33
DSC3-201ENST00000360428 LMBR1Q8WVP7 490 aa6.77□□□□□ -1.33
DSC3-201ENST00000360428 JADE2Q9NQC1 790 aa6.77□□□□□ -1.33
DSC3-201ENST00000360428 COMMD10Q9Y6G5 202 aa6.77□□□□□ -1.33
DSC3-201ENST00000360428 NCOA2Q15596 1464 aa6.77□□□□□ -1.33
DSC3-201ENST00000360428 TARBP1Q13395 1621 aaKnown RBP6.77□□□□□ -1.33
DSC3-201ENST00000360428 ZNF213O14771 459 aa6.77□□□□□ -1.33
DSC3-201ENST00000360428 CATIPQ7Z7H3 387 aa6.77□□□□□ -1.33
DSC3-201ENST00000360428 NAPBQ9H115 298 aa6.77□□□□□ -1.33
DSC3-201ENST00000360428 MKNK2Q9HBH9 465 aa6.77□□□□□ -1.33
DSC3-201ENST00000360428 ZNF652Q9Y2D9 606 aa6.77□□□□□ -1.33
DSC3-201ENST00000360428 SUPT6HQ7KZ85 1726 aaKnown RBP6.77□□□□□ -1.33
DSC3-201ENST00000360428 CCDC194A0A1B0GVG4 234 aa6.77□□□□□ -1.33
DSC3-201ENST00000360428 POLR3DP05423 398 aaPredicted RBP6.77□□□□□ -1.33
DSC3-201ENST00000360428 ZNF530Q6P9A1 599 aaPredicted RBP6.77□□□□□ -1.33
DSC3-201ENST00000360428 CCDC121Q6ZUS5 278 aa6.77□□□□□ -1.33
DSC3-201ENST00000360428 KLHL34Q8N239 644 aa6.77□□□□□ -1.33
DSC3-201ENST00000360428 SMC6Q96SB8 1091 aa6.77□□□□□ -1.33
DSC3-201ENST00000360428 MAGI3Q5TCQ9 1506 aa6.77□□□□□ -1.33
DSC3-201ENST00000360428 CTAGE15A4D2H0 777 aa6.77□□□□□ -1.33
DSC3-201ENST00000360428 CTAGE8P0CG41 777 aa6.77□□□□□ -1.33
DSC3-201ENST00000360428 NLRP5P59047 1200 aa6.77□□□□□ -1.33
DSC3-201ENST00000360428 MAP3K12Q12852 859 aa6.77□□□□□ -1.33
DSC3-201ENST00000360428 TTC31Q49AM3 519 aaPredicted RBP6.77□□□□□ -1.33
DSC3-201ENST00000360428 CTAGE6Q86UF2 777 aa6.77□□□□□ -1.33
DSC3-201ENST00000360428 CTAGE4Q8IX94 777 aa6.77□□□□□ -1.33
DSC3-201ENST00000360428 IQCGQ9H095 443 aaKnown RBP6.77□□□□□ -1.33
DSC3-201ENST00000360428 HMG20BQ9P0W2 317 aa6.77□□□□□ -1.33
DSC3-201ENST00000360428 CFAP43Q8NDM7 1665 aa6.77□□□□□ -1.33
DSC3-201ENST00000360428 IFIT1P09914 478 aaKnown RBP6.77□□□□□ -1.33
DSC3-201ENST00000360428 KIF5BP33176 963 aa6.77□□□□□ -1.33
DSC3-201ENST00000360428 RAB3IL1Q8TBN0 382 aa6.77□□□□□ -1.33
DSC3-201ENST00000360428 USP25Q9UHP3 1055 aa6.77□□□□□ -1.33
DSC3-201ENST00000360428 IBSPP21815 317 aaPredicted RBP6.76□□□□□ -1.33
DSC3-201ENST00000360428 MXRA7P84157 204 aa6.76□□□□□ -1.33
DSC3-201ENST00000360428 PRPF40BQ6NWY9 871 aaKnown RBP6.76□□□□□ -1.33
DSC3-201ENST00000360428 USP37Q86T82 979 aa6.76□□□□□ -1.33
DSC3-201ENST00000360428 ZNF444Q8N0Y2 327 aaPredicted RBP6.76□□□□□ -1.33
DSC3-201ENST00000360428 UBE2Q2Q8WVN8 375 aa6.76□□□□□ -1.33
DSC3-201ENST00000360428 TNPO1Q92973 898 aaKnown RBP6.76□□□□□ -1.33
DSC3-201ENST00000360428 GNAT3A8MTJ3 354 aa6.76□□□□□ -1.33
DSC3-201ENST00000360428 IDH1O75874 414 aaKnown RBP6.76□□□□□ -1.33
DSC3-201ENST00000360428 SETSIPP0DME0 302 aa6.76□□□□□ -1.33
DSC3-201ENST00000360428 MYL6BP14649 208 aa6.76□□□□□ -1.33
DSC3-201ENST00000360428 TTF1Q15361 905 aaPredicted RBP6.76□□□□□ -1.33
DSC3-201ENST00000360428 LRSAM1Q6UWE0 723 aa6.76□□□□□ -1.33
DSC3-201ENST00000360428 CEP128Q6ZU80 1094 aa6.76□□□□□ -1.33
DSC3-201ENST00000360428 METTL24Q5JXM2 366 aa6.76□□□□□ -1.33
DSC3-201ENST00000360428 GOLGA1Q92805 767 aa6.76□□□□□ -1.33
DSC3-201ENST00000360428 EVI5LQ96CN4 794 aa6.76□□□□□ -1.33
DSC3-201ENST00000360428 CDK19Q9BWU1 502 aa6.76□□□□□ -1.33
DSC3-201ENST00000360428 FANCD2Q9BXW9 1451 aa6.76□□□□□ -1.33
DSC3-201ENST00000360428 UBA5Q9GZZ9 404 aa6.76□□□□□ -1.33
DSC3-201ENST00000360428 GAPVD1Q14C86 1478 aa6.76□□□□□ -1.33
DSC3-201ENST00000360428 GOLGA8AA7E2F4 631 aa6.76□□□□□ -1.33
DSC3-201ENST00000360428 GOLGA8BA8MQT2 603 aa6.76□□□□□ -1.33
DSC3-201ENST00000360428 ATP2A1O14983 1001 aa6.76□□□□□ -1.33
DSC3-201ENST00000360428 STARD3NLO95772 234 aa6.76□□□□□ -1.33
DSC3-201ENST00000360428 GNG11P61952 73 aa6.76□□□□□ -1.33
DSC3-201ENST00000360428 SPAG1Q07617 926 aa6.76□□□□□ -1.33
DSC3-201ENST00000360428 KLHL40Q2TBA0 621 aa6.76□□□□□ -1.33
DSC3-201ENST00000360428 CCDC102BQ68D86 513 aa6.76□□□□□ -1.33
DSC3-201ENST00000360428 CEP83Q9Y592 693 aa6.76□□□□□ -1.33
DSC3-201ENST00000360428 TMEM57Q8N5G2 664 aa6.76□□□□□ -1.33
DSC3-201ENST00000360428 CCDC110Q8TBZ0 833 aa6.76□□□□□ -1.33
DSC3-201ENST00000360428 RSRC1Q96IZ7 334 aaKnown RBP6.76□□□□□ -1.33
DSC3-201ENST00000360428 URB2Q14146 1524 aaKnown RBP6.76□□□□□ -1.33
DSC3-201ENST00000360428 RTEL1-TNFRSF6BF6WH68 1400 aa6.76□□□□□ -1.33
DSC3-201ENST00000360428 PTPRCP08575 1304 aa6.76□□□□□ -1.33
DSC3-201ENST00000360428 PRC1O43663 620 aa6.76□□□□□ -1.33
DSC3-201ENST00000360428 STX6O43752 255 aa6.76□□□□□ -1.33
DSC3-201ENST00000360428 PRPF4BQ13523 1007 aaKnown RBP6.76□□□□□ -1.33
DSC3-201ENST00000360428 CPLX3Q8WVH0 158 aa6.76□□□□□ -1.33
DSC3-201ENST00000360428 KIF21AQ7Z4S6 1674 aa6.76□□□□□ -1.33
DSC3-201ENST00000360428 SLC5A1P13866 664 aa6.75□□□□□ -1.33
DSC3-201ENST00000360428 NUTM2GQ5VZR2 741 aa6.75□□□□□ -1.33
DSC3-201ENST00000360428 CYB5RLQ6IPT4 315 aa6.75□□□□□ -1.33
DSC3-201ENST00000360428 NBPF11Q86T75 865 aa6.75□□□□□ -1.33
DSC3-201ENST00000360428 ARFGAP2Q8N6H7 521 aa6.75□□□□□ -1.33
DSC3-201ENST00000360428 EFCAB5A4FU69 1503 aa6.75□□□□□ -1.33
DSC3-201ENST00000360428 CTAGE9A4FU28 777 aa6.75□□□□□ -1.33
DSC3-201ENST00000360428 A6NNZ2 444 aa6.75□□□□□ -1.33
DSC3-201ENST00000360428 ALDH3A1P30838 453 aa6.75□□□□□ -1.33
DSC3-201ENST00000360428 KRT83P78385 493 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms