RNA–Protein interactions for RNA: ENST00000360299.9

RAB5B-201, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 5,340 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-201ENST00000360299 ZC3H12CQ9C0D7 883 aaKnown RBP8.39□□□□□ -1.07
RAB5B-201ENST00000360299 FRMPD1Q5SYB0 1578 aa8.39□□□□□ -1.07
RAB5B-201ENST00000360299 NEK4P51957 841 aa8.39□□□□□ -1.07
RAB5B-201ENST00000360299 C2CD5Q86YS7 1000 aa8.39□□□□□ -1.07
RAB5B-201ENST00000360299 JARID2Q92833 1246 aaPredicted RBP8.39□□□□□ -1.07
RAB5B-201ENST00000360299 CEP170BQ9Y4F5 1589 aaPredicted RBP8.39□□□□□ -1.07
RAB5B-201ENST00000360299 ANKRD18BA2A2Z9 1011 aa8.38□□□□□ -1.07
RAB5B-201ENST00000360299 BECN2A8MW95 431 aa8.38□□□□□ -1.07
RAB5B-201ENST00000360299 GLRX3O76003 335 aaKnown RBP8.38□□□□□ -1.07
RAB5B-201ENST00000360299 NLGN1Q8N2Q7 840 aa8.38□□□□□ -1.07
RAB5B-201ENST00000360299 DNAAF4Q8WXU2 420 aa8.38□□□□□ -1.07
RAB5B-201ENST00000360299 CCDC47Q96A33 483 aaKnown RBP8.38□□□□□ -1.07
RAB5B-201ENST00000360299 VEZTQ9HBM0 779 aa8.38□□□□□ -1.07
RAB5B-201ENST00000360299 SBNO2Q9Y2G9 1366 aa8.38□□□□□ -1.07
RAB5B-201ENST00000360299 FOXD4L5Q5VV16 416 aaPredicted RBP8.38□□□□□ -1.07
RAB5B-201ENST00000360299 CRACR2BQ8N4Y2 399 aaPredicted RBP8.38□□□□□ -1.07
RAB5B-201ENST00000360299 FOXD4L4Q8WXT5 416 aaPredicted RBP8.38□□□□□ -1.07
RAB5B-201ENST00000360299 POLKQ9UBT6 870 aa8.38□□□□□ -1.07
RAB5B-201ENST00000360299 WDR17Q8IZU2 1322 aa8.38□□□□□ -1.07
RAB5B-201ENST00000360299 IFT172Q9UG01 1749 aa8.38□□□□□ -1.07
RAB5B-201ENST00000360299 KRT32Q14532 448 aa8.38□□□□□ -1.07
RAB5B-201ENST00000360299 VPS72Q15906 364 aa8.38□□□□□ -1.07
RAB5B-201ENST00000360299 CCDC152Q4G0S7 254 aa8.38□□□□□ -1.07
RAB5B-201ENST00000360299 BIN2Q9UBW5 565 aaPredicted RBP8.38□□□□□ -1.07
RAB5B-201ENST00000360299 AKAP2Q9Y2D5 859 aa8.38□□□□□ -1.07
RAB5B-201ENST00000360299 NACAP1Q9BZK3 213 aa8.38□□□□□ -1.07
RAB5B-201ENST00000360299 LRP2BPQ9P2M1 347 aa8.38□□□□□ -1.07
RAB5B-201ENST00000360299 CTNNA3Q9UI47 895 aa8.38□□□□□ -1.07
RAB5B-201ENST00000360299 FER1L4A9Z1Z3 1794 aa8.37□□□□□ -1.07
RAB5B-201ENST00000360299 CIZ1Q9ULV3 898 aaPredicted RBP8.37□□□□□ -1.07
RAB5B-201ENST00000360299 VPS37CA5D8V6 355 aaPredicted RBP8.37□□□□□ -1.07
RAB5B-201ENST00000360299 MBD3O95983 291 aa8.37□□□□□ -1.07
RAB5B-201ENST00000360299 IFIT1P09914 478 aaKnown RBP8.37□□□□□ -1.07
RAB5B-201ENST00000360299 TRIM27P14373 513 aa8.37□□□□□ -1.07
RAB5B-201ENST00000360299 ANKRD18AQ8IVF6 992 aa8.37□□□□□ -1.07
RAB5B-201ENST00000360299 CYP46A1Q9Y6A2 500 aa8.37□□□□□ -1.07
RAB5B-201ENST00000360299 MPHOSPH10O00566 681 aaKnown RBP8.37□□□□□ -1.07
RAB5B-201ENST00000360299 FLIIQ13045 1269 aa8.37□□□□□ -1.07
RAB5B-201ENST00000360299 DZIP1Q86YF9 867 aaKnown RBP8.37□□□□□ -1.07
RAB5B-201ENST00000360299 DNAJC10Q8IXB1 793 aa8.37□□□□□ -1.07
RAB5B-201ENST00000360299 BRMS1Q9HCU9 246 aa8.37□□□□□ -1.07
RAB5B-201ENST00000360299 MTHFSDQ2M296 383 aaKnown RBP8.37□□□□□ -1.07
RAB5B-201ENST00000360299 AACSQ86V21 672 aa8.37□□□□□ -1.07
RAB5B-201ENST00000360299 CWC25Q9NXE8 425 aaPredicted RBP8.37□□□□□ -1.07
RAB5B-201ENST00000360299 BLMP54132 1417 aaPredicted RBP8.37□□□□□ -1.07
RAB5B-201ENST00000360299 RNMTO43148 476 aaKnown RBP8.36□□□□□ -1.07
RAB5B-201ENST00000360299 EZH2Q15910 746 aaKnown RBP8.36□□□□□ -1.07
RAB5B-201ENST00000360299 MBIPQ9NS73 344 aa8.36□□□□□ -1.07
RAB5B-201ENST00000360299 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.36□□□□□ -1.07
RAB5B-201ENST00000360299 LOC102724428A0A0B4J2F2 783 aa8.36□□□□□ -1.07
RAB5B-201ENST00000360299 PDE6BP35913 854 aa8.36□□□□□ -1.07
RAB5B-201ENST00000360299 SIK1P57059 783 aa8.36□□□□□ -1.07
RAB5B-201ENST00000360299 CCDC73Q6ZRK6 1079 aa8.36□□□□□ -1.07
RAB5B-201ENST00000360299 NIM1KQ8IY84 436 aa8.36□□□□□ -1.07
RAB5B-201ENST00000360299 ZSCAN31Q96LW9 406 aaPredicted RBP8.36□□□□□ -1.07
RAB5B-201ENST00000360299 EYA3Q99504 573 aa8.36□□□□□ -1.07
RAB5B-201ENST00000360299 FKBP4Q02790 459 aaKnown RBP eCLIP8.36□□□□□ -1.07
RAB5B-201ENST00000360299 TXNRD1Q16881 649 aa8.36□□□□□ -1.07
RAB5B-201ENST00000360299 BICD2Q8TD16 824 aa8.36□□□□□ -1.07
RAB5B-201ENST00000360299 CARD14Q9BXL6 1004 aa8.36□□□□□ -1.07
RAB5B-201ENST00000360299 EDC4Q6P2E9 1401 aaKnown RBP8.36□□□□□ -1.07
RAB5B-201ENST00000360299 LETM1O95202 739 aaPredicted RBP8.36□□□□□ -1.07
RAB5B-201ENST00000360299 TPM3P06753 285 aa8.36□□□□□ -1.07
RAB5B-201ENST00000360299 XAGE3Q8WTP9 111 aa8.36□□□□□ -1.07
RAB5B-201ENST00000360299 AIDAQ96BJ3 306 aa8.36□□□□□ -1.07
RAB5B-201ENST00000360299 SYNMO15061 1565 aa8.36□□□□□ -1.07
RAB5B-201ENST00000360299 TNS3Q68CZ2 1445 aa8.36□□□□□ -1.07
RAB5B-201ENST00000360299 BABAM1Q9NWV8 329 aa8.35□□□□□ -1.07
RAB5B-201ENST00000360299 SBNO1A3KN83 1393 aa8.35□□□□□ -1.07
RAB5B-201ENST00000360299 AGLP35573 1532 aa8.35□□□□□ -1.07
RAB5B-201ENST00000360299 TPM2P07951 284 aa8.35□□□□□ -1.07
RAB5B-201ENST00000360299 KIAA1210Q9ULL0 1709 aa8.35□□□□□ -1.07
RAB5B-201ENST00000360299 TPM1P09493 284 aa8.35□□□□□ -1.07
RAB5B-201ENST00000360299 CHMP4BP1P59074 171 aa8.35□□□□□ -1.07
RAB5B-201ENST00000360299 TPD52L1Q16890 204 aaPredicted RBP8.35□□□□□ -1.07
RAB5B-201ENST00000360299 COPS6Q7L5N1 327 aa8.35□□□□□ -1.07
RAB5B-201ENST00000360299 CCDC125Q86Z20 511 aa8.35□□□□□ -1.07
RAB5B-201ENST00000360299 ARHGAP31Q2M1Z3 1444 aa8.35□□□□□ -1.07
RAB5B-201ENST00000360299 KIF1BO60333 1816 aa8.35□□□□□ -1.07
RAB5B-201ENST00000360299 MX1P20591 662 aa8.35□□□□□ -1.07
RAB5B-201ENST00000360299 PRKG1Q13976 671 aa8.35□□□□□ -1.07
RAB5B-201ENST00000360299 ANKRD13DQ6ZTN6 518 aa8.35□□□□□ -1.07
RAB5B-201ENST00000360299 K7ELQ4 463 aaPredicted RBP8.34□□□□□ -1.07
RAB5B-201ENST00000360299 HDAC1Q13547 482 aaPredicted RBP8.34□□□□□ -1.07
RAB5B-201ENST00000360299 DALRD3Q5D0E6 543 aaKnown RBP8.34□□□□□ -1.07
RAB5B-201ENST00000360299 ANKRD20A12PQ8NF67 263 aa8.34□□□□□ -1.07
RAB5B-201ENST00000360299 NEURL4Q96JN8 1562 aa8.34□□□□□ -1.07
RAB5B-201ENST00000360299 ABT1Q9ULW3 272 aaKnown RBP8.34□□□□□ -1.07
RAB5B-201ENST00000360299 TSR1Q2NL82 804 aaKnown RBP8.34□□□□□ -1.07
RAB5B-201ENST00000360299 MAP3K2Q9Y2U5 619 aa8.34□□□□□ -1.07
RAB5B-201ENST00000360299 LMTK2Q8IWU2 1503 aa8.34□□□□□ -1.07
RAB5B-201ENST00000360299 PPIP5K2O43314 1243 aa8.34□□□□□ -1.07
RAB5B-201ENST00000360299 NFKBIBQ15653 356 aa8.34□□□□□ -1.07
RAB5B-201ENST00000360299 DPP8Q6V1X1 898 aaPredicted RBP8.34□□□□□ -1.07
RAB5B-201ENST00000360299 UBE3BQ7Z3V4 1068 aa8.34□□□□□ -1.07
RAB5B-201ENST00000360299 ARHGEF25Q86VW2 580 aa8.34□□□□□ -1.07
RAB5B-201ENST00000360299 SIGLEC1Q9BZZ2 1709 aa8.34□□□□□ -1.07
RAB5B-201ENST00000360299 MYOM2P54296 1465 aa8.34□□□□□ -1.07
RAB5B-201ENST00000360299 NRXN1Q9ULB1 1477 aa8.34□□□□□ -1.07
RAB5B-201ENST00000360299 GPBP1L1Q9HC44 474 aaPredicted RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms