RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 IMMTQ16891 758 aaKnown RBP6.68□□□□□ -1.34
BRCA1-203ENST00000357654 RAB11FIP4Q86YS3 637 aa6.68□□□□□ -1.34
BRCA1-203ENST00000357654 MYD88Q99836 296 aa6.68□□□□□ -1.34
BRCA1-203ENST00000357654 TSPY26PQ9H489 355 aa6.68□□□□□ -1.34
BRCA1-203ENST00000357654 GOLGA6AQ9NYA3 693 aa6.68□□□□□ -1.34
BRCA1-203ENST00000357654 SLC9A5Q14940 896 aa6.68□□□□□ -1.34
BRCA1-203ENST00000357654 NAPBQ9H115 298 aa6.68□□□□□ -1.34
BRCA1-203ENST00000357654 CAMK4Q16566 473 aa6.67□□□□□ -1.34
BRCA1-203ENST00000357654 TMCO3Q6UWJ1 677 aa6.67□□□□□ -1.34
BRCA1-203ENST00000357654 NLRP13Q86W25 1043 aa6.67□□□□□ -1.34
BRCA1-203ENST00000357654 CTCFLQ8NI51 663 aaPredicted RBP6.67□□□□□ -1.34
BRCA1-203ENST00000357654 ARHGAP29Q52LW3 1261 aa6.67□□□□□ -1.34
BRCA1-203ENST00000357654 ANKLE2Q86XL3 938 aa6.67□□□□□ -1.34
BRCA1-203ENST00000357654 WDR48Q8TAF3 677 aa6.67□□□□□ -1.34
BRCA1-203ENST00000357654 ZBTB9Q96C00 473 aa6.67□□□□□ -1.34
BRCA1-203ENST00000357654 TRIM6Q9C030 488 aaPredicted RBP6.67□□□□□ -1.34
BRCA1-203ENST00000357654 KIF9Q9HAQ2 790 aa6.67□□□□□ -1.34
BRCA1-203ENST00000357654 CEP131Q9UPN4 1083 aa6.67□□□□□ -1.34
BRCA1-203ENST00000357654 CCDC194A0A1B0GVG4 234 aa6.67□□□□□ -1.34
BRCA1-203ENST00000357654 SPDYE2BA6NHP3 402 aa6.67□□□□□ -1.34
BRCA1-203ENST00000357654 LETM1O95202 739 aaPredicted RBP6.67□□□□□ -1.34
BRCA1-203ENST00000357654 SPDYE6P0CI01 402 aa6.67□□□□□ -1.34
BRCA1-203ENST00000357654 DAAM2Q86T65 1068 aa6.67□□□□□ -1.34
BRCA1-203ENST00000357654 FNBP4Q8N3X1 1017 aaPredicted RBP6.67□□□□□ -1.34
BRCA1-203ENST00000357654 NUP88Q99567 741 aaPredicted RBP6.67□□□□□ -1.34
BRCA1-203ENST00000357654 FAM169AQ9Y6X4 670 aa6.67□□□□□ -1.34
BRCA1-203ENST00000357654 CBFA2T2O43439 604 aa6.67□□□□□ -1.34
BRCA1-203ENST00000357654 SORBS3O60504 671 aa6.67□□□□□ -1.34
BRCA1-203ENST00000357654 PPFIA3O75145 1194 aa6.67□□□□□ -1.34
BRCA1-203ENST00000357654 TBCAO75347 108 aaKnown RBP6.67□□□□□ -1.34
BRCA1-203ENST00000357654 SLC5A1P13866 664 aa6.67□□□□□ -1.34
BRCA1-203ENST00000357654 EXOC6Q8TAG9 804 aa6.67□□□□□ -1.34
BRCA1-203ENST00000357654 ZFP91Q96JP5 570 aaPredicted RBP6.67□□□□□ -1.34
BRCA1-203ENST00000357654 BACH1O14867 736 aa6.66□□□□□ -1.34
BRCA1-203ENST00000357654 CDC45O75419 566 aa6.66□□□□□ -1.34
BRCA1-203ENST00000357654 GMNNO75496 209 aa6.66□□□□□ -1.34
BRCA1-203ENST00000357654 GAS8O95995 478 aa6.66□□□□□ -1.34
BRCA1-203ENST00000357654 TCIRG1Q13488 830 aa6.66□□□□□ -1.34
BRCA1-203ENST00000357654 MCM10Q7L590 875 aa6.66□□□□□ -1.34
BRCA1-203ENST00000357654 PANK1Q8TE04 598 aa6.66□□□□□ -1.34
BRCA1-203ENST00000357654 TTC21AQ8NDW8 1320 aa6.66□□□□□ -1.34
BRCA1-203ENST00000357654 BCAR3O75815 825 aa6.66□□□□□ -1.34
BRCA1-203ENST00000357654 NBPF6Q5VWK0 638 aa6.66□□□□□ -1.34
BRCA1-203ENST00000357654 NBPF5PQ86XG9 351 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-203ENST00000357654 NBPF4Q96M43 638 aa6.66□□□□□ -1.34
BRCA1-203ENST00000357654 CGNQ9P2M7 1197 aaKnown RBP6.66□□□□□ -1.34
BRCA1-203ENST00000357654 JAG2Q9Y219 1238 aa6.66□□□□□ -1.34
BRCA1-203ENST00000357654 EXOC5O00471 708 aa6.66□□□□□ -1.34
BRCA1-203ENST00000357654 FAM13AO94988 1023 aa6.66□□□□□ -1.34
BRCA1-203ENST00000357654 GNAI2P04899 355 aa6.66□□□□□ -1.34
BRCA1-203ENST00000357654 MTIF2P46199 727 aaKnown RBP6.66□□□□□ -1.34
BRCA1-203ENST00000357654 CFAP100Q494V2 611 aa6.66□□□□□ -1.34
BRCA1-203ENST00000357654 WASF1Q92558 559 aa6.66□□□□□ -1.34
BRCA1-203ENST00000357654 ABCF3Q9NUQ8 709 aa6.66□□□□□ -1.34
BRCA1-203ENST00000357654 DAPK3O43293 454 aa6.66□□□□□ -1.34
BRCA1-203ENST00000357654 GANCQ8TET4 914 aa6.66□□□□□ -1.34
BRCA1-203ENST00000357654 RAB34Q9BZG1 259 aa6.66□□□□□ -1.34
BRCA1-203ENST00000357654 FAM107BQ9H098 131 aa6.66□□□□□ -1.34
BRCA1-203ENST00000357654 MIS18AQ9NYP9 233 aa6.66□□□□□ -1.34
BRCA1-203ENST00000357654 TSPY2A6NKD2 308 aa6.66□□□□□ -1.34
BRCA1-203ENST00000357654 SMTNL1A8MU46 457 aa6.66□□□□□ -1.34
BRCA1-203ENST00000357654 HMGB2P26583 209 aaKnown RBP6.66□□□□□ -1.34
BRCA1-203ENST00000357654 PLCB3Q01970 1234 aa6.66□□□□□ -1.34
BRCA1-203ENST00000357654 CCDC157Q569K6 752 aa6.66□□□□□ -1.34
BRCA1-203ENST00000357654 KAT14Q9H8E8 782 aa6.66□□□□□ -1.34
BRCA1-203ENST00000357654 IQSEC3Q9UPP2 1182 aaPredicted RBP6.66□□□□□ -1.34
BRCA1-203ENST00000357654 HMGXB3Q12766 1538 aa6.66□□□□□ -1.34
BRCA1-203ENST00000357654 KIF7Q2M1P5 1343 aa6.66□□□□□ -1.34
BRCA1-203ENST00000357654 SRGAP3O43295 1099 aa6.66□□□□□ -1.34
BRCA1-203ENST00000357654 SULT6B1Q6IMI4 303 aa6.66□□□□□ -1.34
BRCA1-203ENST00000357654 MAATS1Q7Z4T9 603 aa6.66□□□□□ -1.34
BRCA1-203ENST00000357654 WIZO95785 1651 aa6.65□□□□□ -1.34
BRCA1-203ENST00000357654 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.65□□□□□ -1.34
BRCA1-203ENST00000357654 KIF5BP33176 963 aa6.65□□□□□ -1.34
BRCA1-203ENST00000357654 FOXD4Q12950 439 aaPredicted RBP6.65□□□□□ -1.34
BRCA1-203ENST00000357654 ZYXQ15942 572 aaKnown RBP6.65□□□□□ -1.34
BRCA1-203ENST00000357654 CCDC14Q49A88 953 aa6.65□□□□□ -1.34
BRCA1-203ENST00000357654 C6orf163Q5TEZ5 329 aa6.65□□□□□ -1.34
BRCA1-203ENST00000357654 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.65□□□□□ -1.34
BRCA1-203ENST00000357654 CALML4Q96GE6 196 aa6.65□□□□□ -1.34
BRCA1-203ENST00000357654 JAKMIP1Q96N16 626 aaKnown RBP6.65□□□□□ -1.34
BRCA1-203ENST00000357654 IL1RAPL2Q9NP60 686 aa6.65□□□□□ -1.34
BRCA1-203ENST00000357654 PPANQ9NQ55 473 aaKnown RBP6.65□□□□□ -1.34
BRCA1-203ENST00000357654 TXNDC16Q9P2K2 825 aa6.65□□□□□ -1.34
BRCA1-203ENST00000357654 IVNS1ABPQ9Y6Y0 642 aa6.65□□□□□ -1.34
BRCA1-203ENST00000357654 ARHGAP35Q9NRY4 1499 aa6.65□□□□□ -1.34
BRCA1-203ENST00000357654 UACAQ9BZF9 1416 aa6.65□□□□□ -1.34
BRCA1-203ENST00000357654 WDR46O15213 610 aaKnown RBP6.65□□□□□ -1.34
BRCA1-203ENST00000357654 ADRA2BP18089 450 aa6.65□□□□□ -1.34
BRCA1-203ENST00000357654 NASPP49321 788 aaPredicted RBP6.65□□□□□ -1.34
BRCA1-203ENST00000357654 LARP1BQ659C4 914 aaKnown RBP6.65□□□□□ -1.34
BRCA1-203ENST00000357654 CCDC114Q96M63 670 aa6.65□□□□□ -1.34
BRCA1-203ENST00000357654 MAK16Q9BXY0 300 aaKnown RBP6.65□□□□□ -1.34
BRCA1-203ENST00000357654 TOP2AP11388 1531 aaKnown RBP6.65□□□□□ -1.34
BRCA1-203ENST00000357654 GOLGA3Q08378 1498 aa6.65□□□□□ -1.34
BRCA1-203ENST00000357654 GTF2F1P35269 517 aaKnown RBP eCLIP6.65□□□□□ -1.344e-8■■■□□ 16.5
BRCA1-203ENST00000357654 KRT9P35527 623 aa6.65□□□□□ -1.34
BRCA1-203ENST00000357654 FILIP1Q7Z7B0 1213 aa6.65□□□□□ -1.34
BRCA1-203ENST00000357654 RNF217Q8TC41 542 aa6.65□□□□□ -1.34
BRCA1-203ENST00000357654 SKA2Q8WVK7 121 aaPredicted RBP6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms