RNA–Protein interactions for RNA: ENST00000357194.10

UBE2D3-206, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2 BASIC

Gene UBE2D3, Length 660 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-206ENST00000357194 HSPA1BP0DMV9 641 aaKnown RBP13.73□□□□□ -0.21
UBE2D3-206ENST00000357194 SRGNP10124 158 aa13.73□□□□□ -0.21
UBE2D3-206ENST00000357194 ST5P78524 1137 aa13.73□□□□□ -0.21
UBE2D3-206ENST00000357194 STYK1Q6J9G0 422 aa13.73□□□□□ -0.21
UBE2D3-206ENST00000357194 DZIP3Q86Y13 1208 aaKnown RBP13.73□□□□□ -0.21
UBE2D3-206ENST00000357194 PHACTR3Q96KR7 559 aa13.73□□□□□ -0.21
UBE2D3-206ENST00000357194 CEMIPQ8WUJ3 1361 aa13.72□□□□□ -0.21
UBE2D3-206ENST00000357194 NPC1L1Q9UHC9 1359 aa13.72□□□□□ -0.21
UBE2D3-206ENST00000357194 DDNO94850 711 aaPredicted RBP13.72□□□□□ -0.21
UBE2D3-206ENST00000357194 PIP4K2AP48426 406 aaPredicted RBP13.72□□□□□ -0.21
UBE2D3-206ENST00000357194 PRPF40BQ6NWY9 871 aaKnown RBP13.72□□□□□ -0.21
UBE2D3-206ENST00000357194 MASTLQ96GX5 879 aa13.72□□□□□ -0.21
UBE2D3-206ENST00000357194 USP16Q9Y5T5 823 aa13.72□□□□□ -0.21
UBE2D3-206ENST00000357194 BCORQ6W2J9 1755 aa13.72□□□□□ -0.21
UBE2D3-206ENST00000357194 PRKAR2BP31323 418 aa13.71□□□□□ -0.21
UBE2D3-206ENST00000357194 SOGA3Q5TF21 947 aa13.71□□□□□ -0.21
UBE2D3-206ENST00000357194 CHADLQ6NUI6 762 aa13.71□□□□□ -0.21
UBE2D3-206ENST00000357194 ARFGEF2Q9Y6D5 1785 aa13.71□□□□□ -0.22
UBE2D3-206ENST00000357194 PRAMEF22A3QJZ6 481 aa13.7□□□□□ -0.22
UBE2D3-206ENST00000357194 POTEIP0CG38 1075 aa13.7□□□□□ -0.22
UBE2D3-206ENST00000357194 POTEJP0CG39 1038 aa13.7□□□□□ -0.22
UBE2D3-206ENST00000357194 NBPF5PQ86XG9 351 aaPredicted RBP13.7□□□□□ -0.22
UBE2D3-206ENST00000357194 RSPH6AQ9H0K4 717 aa13.7□□□□□ -0.22
UBE2D3-206ENST00000357194 CLEC4GQ6UXB4 293 aa13.69□□□□□ -0.22
UBE2D3-206ENST00000357194 CREBZFQ9NS37 354 aa13.69□□□□□ -0.22
UBE2D3-206ENST00000357194 MKRN1Q9UHC7 482 aaKnown RBP13.69□□□□□ -0.22
UBE2D3-206ENST00000357194 SNRPA1P09661 255 aaKnown RBP13.68□□□□□ -0.22
UBE2D3-206ENST00000357194 C7orf43Q8WVR3 580 aa13.68□□□□□ -0.22
UBE2D3-206ENST00000357194 CFAP53Q96M91 514 aa13.68□□□□□ -0.22
UBE2D3-206ENST00000357194 ZNF652Q9Y2D9 606 aa13.68□□□□□ -0.22
UBE2D3-206ENST00000357194 IQCA1LA6NCM1 817 aa13.67□□□□□ -0.22
UBE2D3-206ENST00000357194 NPR1P16066 1061 aa13.67□□□□□ -0.22
UBE2D3-206ENST00000357194 CCDC93Q567U6 631 aa13.67□□□□□ -0.22
UBE2D3-206ENST00000357194 TPTE2Q6XPS3 522 aa13.67□□□□□ -0.22
UBE2D3-206ENST00000357194 MCM10Q7L590 875 aa13.67□□□□□ -0.22
UBE2D3-206ENST00000357194 RTF1Q92541 710 aaKnown RBP13.67□□□□□ -0.22
UBE2D3-206ENST00000357194 NUDCQ9Y266 331 aa13.67□□□□□ -0.22
UBE2D3-206ENST00000357194 SCN4AP35499 1836 aa13.67□□□□□ -0.22
UBE2D3-206ENST00000357194 KLRG2A4D1S0 409 aaPredicted RBP13.66□□□□□ -0.22
UBE2D3-206ENST00000357194 NIP7Q9Y221 180 aaKnown RBP eCLIP13.66□□□□□ -0.22
UBE2D3-206ENST00000357194 FAM177BA6PVY3 158 aa13.65□□□□□ -0.22
UBE2D3-206ENST00000357194 NBPF26B4DH59 902 aa13.65□□□□□ -0.22
UBE2D3-206ENST00000357194 U2AF1L5P0DN76 240 aaPredicted RBP13.65□□□□□ -0.22
UBE2D3-206ENST00000357194 U2AF1Q01081 240 aaKnown RBP eCLIP13.65□□□□□ -0.222e-12■□□□□ 11.1
UBE2D3-206ENST00000357194 FKBP4Q02790 459 aaKnown RBP eCLIP13.65□□□□□ -0.222e-9■■□□□ 12.2
UBE2D3-206ENST00000357194 DCTN1Q14203 1278 aa13.65□□□□□ -0.22
UBE2D3-206ENST00000357194 NBPF10Q6P3W6 841 aaKnown RBP13.65□□□□□ -0.22
UBE2D3-206ENST00000357194 LDHDQ86WU2 507 aa13.65□□□□□ -0.22
UBE2D3-206ENST00000357194 NBPF15Q8N660 670 aa13.65□□□□□ -0.22
UBE2D3-206ENST00000357194 L3MBTL3Q96JM7 780 aaPredicted RBP13.65□□□□□ -0.22
UBE2D3-206ENST00000357194 TAF1DQ9H5J8 278 aaPredicted RBP13.65□□□□□ -0.22
UBE2D3-206ENST00000357194 PASKQ96RG2 1323 aa13.64□□□□□ -0.23
UBE2D3-206ENST00000357194 OLFM4Q6UX06 510 aa13.64□□□□□ -0.23
UBE2D3-206ENST00000357194 ZNF277Q9NRM2 450 aaPredicted RBP13.64□□□□□ -0.23
UBE2D3-206ENST00000357194 CNTNAP1P78357 1384 aa13.63□□□□□ -0.23
UBE2D3-206ENST00000357194 RGL2O15211 777 aa13.63□□□□□ -0.23
UBE2D3-206ENST00000357194 ALDH1B1P30837 517 aa13.63□□□□□ -0.23
UBE2D3-206ENST00000357194 HLFQ16534 295 aa13.63□□□□□ -0.23
UBE2D3-206ENST00000357194 EAPPQ56P03 285 aaPredicted RBP13.63□□□□□ -0.23
UBE2D3-206ENST00000357194 RTKN2Q8IZC4 609 aa13.63□□□□□ -0.23
UBE2D3-206ENST00000357194 ZNF541Q9H0D2 1346 aa13.63□□□□□ -0.23
UBE2D3-206ENST00000357194 HTATSF1O43719 755 aaKnown RBP13.62□□□□□ -0.23
UBE2D3-206ENST00000357194 ITGBL1O95965 494 aaPredicted RBP13.62□□□□□ -0.23
UBE2D3-206ENST00000357194 GTF2E1P29083 439 aaPredicted RBP13.62□□□□□ -0.23
UBE2D3-206ENST00000357194 PPP2R1AP30153 589 aa13.62□□□□□ -0.23
UBE2D3-206ENST00000357194 TAF7Q15545 349 aaPredicted RBP13.62□□□□□ -0.23
UBE2D3-206ENST00000357194 MIS18AQ9NYP9 233 aa13.62□□□□□ -0.23
UBE2D3-206ENST00000357194 HACL1Q9UJ83 578 aa13.62□□□□□ -0.23
UBE2D3-206ENST00000357194 CLEC11AQ9Y240 323 aa13.62□□□□□ -0.23
UBE2D3-206ENST00000357194 TMEM88BA6NKF7 163 aa13.61□□□□□ -0.23
UBE2D3-206ENST00000357194 FOXN1O15353 648 aa13.61□□□□□ -0.23
UBE2D3-206ENST00000357194 EPHX2P34913 555 aa13.61□□□□□ -0.23
UBE2D3-206ENST00000357194 IARSP41252 1262 aaKnown RBP13.61□□□□□ -0.23
UBE2D3-206ENST00000357194 SYNE4Q8N205 404 aa13.61□□□□□ -0.23
UBE2D3-206ENST00000357194 FZD9O00144 591 aa13.6□□□□□ -0.23
UBE2D3-206ENST00000357194 VEGFBP49765 207 aa13.6□□□□□ -0.23
UBE2D3-206ENST00000357194 NGEFQ8N5V2 710 aa13.6□□□□□ -0.23
UBE2D3-206ENST00000357194 RNF123Q5XPI4 1314 aa13.6□□□□□ -0.23
UBE2D3-206ENST00000357194 ADAMTSL1Q8N6G6 1762 aa13.59□□□□□ -0.23
UBE2D3-206ENST00000357194 PNMA8AQ86V59 439 aaPredicted RBP13.59□□□□□ -0.23
UBE2D3-206ENST00000357194 JDP2Q8WYK2 163 aa13.59□□□□□ -0.23
UBE2D3-206ENST00000357194 LAMB4A4D0S4 1761 aa13.58□□□□□ -0.23
UBE2D3-206ENST00000357194 NUP98P52948 1817 aa13.58□□□□□ -0.24
UBE2D3-206ENST00000357194 CRY2Q49AN0 593 aa13.58□□□□□ -0.24
UBE2D3-206ENST00000357194 MAP1SQ66K74 1059 aaPredicted RBP13.58□□□□□ -0.24
UBE2D3-206ENST00000357194 NUTM1Q86Y26 1132 aa13.58□□□□□ -0.24
UBE2D3-206ENST00000357194 CNTROBQ8N137 903 aa13.58□□□□□ -0.24
UBE2D3-206ENST00000357194 GPC2Q8N158 579 aa13.58□□□□□ -0.24
UBE2D3-206ENST00000357194 AIDAQ96BJ3 306 aa13.58□□□□□ -0.24
UBE2D3-206ENST00000357194 PSMD1Q99460 953 aa13.58□□□□□ -0.24
UBE2D3-206ENST00000357194 NYXQ9GZU5 481 aa13.58□□□□□ -0.24
UBE2D3-206ENST00000357194 PRDM10Q9NQV6 1147 aa13.58□□□□□ -0.24
UBE2D3-206ENST00000357194 ERVV-1B6SEH8 477 aa13.57□□□□□ -0.24
UBE2D3-206ENST00000357194 CTCFP49711 727 aaPredicted RBP13.57□□□□□ -0.24
UBE2D3-206ENST00000357194 RRP7AQ9Y3A4 280 aaKnown RBP13.57□□□□□ -0.24
UBE2D3-206ENST00000357194 ABCC12Q96J65 1359 aa13.57□□□□□ -0.24
UBE2D3-206ENST00000357194 DLG5Q8TDM6 1919 aa13.56□□□□□ -0.24
UBE2D3-206ENST00000357194 SNED1Q8TER0 1413 aa13.56□□□□□ -0.24
UBE2D3-206ENST00000357194 EIF6P56537 245 aaKnown RBP13.56□□□□□ -0.24
UBE2D3-206ENST00000357194 DEFB115Q30KQ5 88 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms