RNA–Protein interactions for RNA: ENST00000356994.6

SCRIB-202, Transcript of scribbled planar cell polarity protein, humanhuman

APPRIS P4 TSL 2 BASIC

Gene SCRIB, Length 5,218 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRIB-202ENST00000356994 RNF41Q9H4P4 317 aaPredicted RBP19.28■□□□□ 0.68
SCRIB-202ENST00000356994 CPSF2Q9P2I0 782 aaKnown RBP19.28■□□□□ 0.68
SCRIB-202ENST00000356994 EMILIN1Q9Y6C2 1016 aa19.28■□□□□ 0.68
SCRIB-202ENST00000356994 PIK3R4Q99570 1358 aa19.27■□□□□ 0.68
SCRIB-202ENST00000356994 PLB1Q6P1J6 1458 aa19.27■□□□□ 0.68
SCRIB-202ENST00000356994 PARD3Q8TEW0 1356 aa19.27■□□□□ 0.68
SCRIB-202ENST00000356994 F6X3S4 739 aa19.27■□□□□ 0.68
SCRIB-202ENST00000356994 RASSF4Q9H2L5 321 aa19.27■□□□□ 0.68
SCRIB-202ENST00000356994 TMEM132AQ24JP5 1023 aa19.27■□□□□ 0.67
SCRIB-202ENST00000356994 NAPBQ9H115 298 aa19.26■□□□□ 0.67
SCRIB-202ENST00000356994 ZNF213O14771 459 aa19.26■□□□□ 0.67
SCRIB-202ENST00000356994 PPP1R12BO60237 982 aaPredicted RBP19.26■□□□□ 0.67
SCRIB-202ENST00000356994 CENPHQ9H3R5 247 aa19.26■□□□□ 0.67
SCRIB-202ENST00000356994 CKAP2LQ8IYA6 745 aa19.26■□□□□ 0.67
SCRIB-202ENST00000356994 MYD88Q99836 296 aa19.26■□□□□ 0.67
SCRIB-202ENST00000356994 TSG101Q99816 390 aa19.26■□□□□ 0.67
SCRIB-202ENST00000356994 MBIPQ9NS73 344 aa19.26■□□□□ 0.67
SCRIB-202ENST00000356994 CCDC171Q6TFL3 1326 aa19.25■□□□□ 0.67
SCRIB-202ENST00000356994 ADGRL1O94910 1474 aa19.25■□□□□ 0.67
SCRIB-202ENST00000356994 ZNF165P49910 485 aa19.25■□□□□ 0.67
SCRIB-202ENST00000356994 ATP2B2Q01814 1243 aa19.25■□□□□ 0.67
SCRIB-202ENST00000356994 MAP3K12Q12852 859 aa19.25■□□□□ 0.67
SCRIB-202ENST00000356994 CNNM3Q8NE01 707 aa19.25■□□□□ 0.67
SCRIB-202ENST00000356994 PRDM11Q9NQV5 511 aa19.25■□□□□ 0.67
SCRIB-202ENST00000356994 YEATS4O95619 227 aa19.25■□□□□ 0.67
SCRIB-202ENST00000356994 SSBP05455 408 aaKnown RBP eCLIP19.25■□□□□ 0.67
SCRIB-202ENST00000356994 MNAT1P51948 309 aa19.25■□□□□ 0.67
SCRIB-202ENST00000356994 KANK3Q6NY19 840 aa19.25■□□□□ 0.67
SCRIB-202ENST00000356994 WAPLQ7Z5K2 1190 aa19.25■□□□□ 0.67
SCRIB-202ENST00000356994 USO1O60763 962 aaKnown RBP19.25■□□□□ 0.67
SCRIB-202ENST00000356994 ZSCAN22P10073 491 aaPredicted RBP19.25■□□□□ 0.67
SCRIB-202ENST00000356994 GTF2F1P35269 517 aaKnown RBP eCLIP19.25■□□□□ 0.672e-7■■■■□ 21.5
SCRIB-202ENST00000356994 SSRP1Q08945 709 aaKnown RBP19.25■□□□□ 0.67
SCRIB-202ENST00000356994 SLC12A7Q9Y666 1083 aa19.24■□□□□ 0.67
SCRIB-202ENST00000356994 HS1BP3Q53T59 392 aa19.24■□□□□ 0.67
SCRIB-202ENST00000356994 CTCFLQ8NI51 663 aaPredicted RBP19.24■□□□□ 0.67
SCRIB-202ENST00000356994 TMX3Q96JJ7 454 aa19.24■□□□□ 0.67
SCRIB-202ENST00000356994 NOS1P29475 1434 aa19.24■□□□□ 0.67
SCRIB-202ENST00000356994 GRIN2AQ12879 1464 aa19.24■□□□□ 0.67
SCRIB-202ENST00000356994 ENOX2Q16206 610 aaKnown RBP19.24■□□□□ 0.67
SCRIB-202ENST00000356994 LRCH2Q5VUJ6 765 aa19.24■□□□□ 0.67
SCRIB-202ENST00000356994 CCDC8Q9H0W5 538 aaPredicted RBP19.24■□□□□ 0.67
SCRIB-202ENST00000356994 SPDYE4A6NLX3 237 aa19.23■□□□□ 0.67
SCRIB-202ENST00000356994 TUBB4AP04350 444 aa19.23■□□□□ 0.67
SCRIB-202ENST00000356994 C16orf45Q96MC5 204 aaPredicted RBP19.23■□□□□ 0.67
SCRIB-202ENST00000356994 RAB34Q9BZG1 259 aa19.23■□□□□ 0.67
SCRIB-202ENST00000356994 INCENPQ9NQS7 918 aa19.23■□□□□ 0.67
SCRIB-202ENST00000356994 VPS36Q86VN1 386 aa19.23■□□□□ 0.67
SCRIB-202ENST00000356994 C8orf34Q49A92 452 aa19.23■□□□□ 0.67
SCRIB-202ENST00000356994 BMS1Q14692 1282 aaKnown RBP19.22■□□□□ 0.67
SCRIB-202ENST00000356994 GOLGA8BA8MQT2 603 aa19.22■□□□□ 0.67
SCRIB-202ENST00000356994 SNW1Q13573 536 aaKnown RBP19.22■□□□□ 0.67
SCRIB-202ENST00000356994 POLR3AO14802 1390 aaPredicted RBP19.22■□□□□ 0.67
SCRIB-202ENST00000356994 PAFAH1B1P43034 410 aa19.22■□□□□ 0.67
SCRIB-202ENST00000356994 SEC63Q9UGP8 760 aaKnown RBP19.22■□□□□ 0.67
SCRIB-202ENST00000356994 NF2P35240 595 aa19.22■□□□□ 0.67
SCRIB-202ENST00000356994 IFIT5Q13325 482 aaKnown RBP19.22■□□□□ 0.67
SCRIB-202ENST00000356994 IQCA1Q86XH1 822 aa19.22■□□□□ 0.67
SCRIB-202ENST00000356994 NEK1Q96PY6 1258 aa19.22■□□□□ 0.67
SCRIB-202ENST00000356994 TTF1Q15361 905 aaPredicted RBP19.21■□□□□ 0.67
SCRIB-202ENST00000356994 TAX1BP1Q86VP1 789 aa19.21■□□□□ 0.67
SCRIB-202ENST00000356994 GOLGA8AA7E2F4 631 aa19.21■□□□□ 0.67
SCRIB-202ENST00000356994 CETN2P41208 172 aa19.21■□□□□ 0.67
SCRIB-202ENST00000356994 UTP14CQ5TAP6 766 aaKnown RBP19.21■□□□□ 0.67
SCRIB-202ENST00000356994 ANKRD44Q8N8A2 993 aa19.21■□□□□ 0.67
SCRIB-202ENST00000356994 CAVIN4Q5BKX8 364 aa19.21■□□□□ 0.67
SCRIB-202ENST00000356994 EZRP15311 586 aaKnown RBP19.2■□□□□ 0.66
SCRIB-202ENST00000356994 TMC6Q7Z403 805 aa19.2■□□□□ 0.66
SCRIB-202ENST00000356994 SECISBP2LQ93073 1101 aaKnown RBP19.2■□□□□ 0.66
SCRIB-202ENST00000356994 ZNF652Q9Y2D9 606 aa19.2■□□□□ 0.66
SCRIB-202ENST00000356994 PCDHB15Q9Y5E8 787 aa19.2■□□□□ 0.66
SCRIB-202ENST00000356994 XRCC6P12956 609 aaKnown RBP eCLIP19.2■□□□□ 0.663e-6■■■■□ 22.6
SCRIB-202ENST00000356994 GBP2P32456 591 aaPredicted RBP19.2■□□□□ 0.66
SCRIB-202ENST00000356994 SDSP20132 328 aa19.2■□□□□ 0.66
SCRIB-202ENST00000356994 MICALCLQ6ZW33 695 aa19.2■□□□□ 0.66
SCRIB-202ENST00000356994 SEPT11Q9NVA2 429 aaKnown RBP19.2■□□□□ 0.66
SCRIB-202ENST00000356994 KLHL10Q6JEL2 608 aa19.2■□□□□ 0.66
SCRIB-202ENST00000356994 CD109Q6YHK3 1445 aa19.2■□□□□ 0.66
SCRIB-202ENST00000356994 SLC5A1P13866 664 aa19.19■□□□□ 0.66
SCRIB-202ENST00000356994 CEP135Q66GS9 1140 aa19.19■□□□□ 0.66
SCRIB-202ENST00000356994 CACNA2D4Q7Z3S7 1137 aa19.19■□□□□ 0.66
SCRIB-202ENST00000356994 GDPD2Q9HCC8 539 aa19.19■□□□□ 0.66
SCRIB-202ENST00000356994 SMC5Q8IY18 1101 aa19.19■□□□□ 0.66
SCRIB-202ENST00000356994 UGGT2Q9NYU1 1516 aa19.19■□□□□ 0.66
SCRIB-202ENST00000356994 POTEJP0CG39 1038 aa19.19■□□□□ 0.66
SCRIB-202ENST00000356994 TTC31Q49AM3 519 aaPredicted RBP19.19■□□□□ 0.66
SCRIB-202ENST00000356994 PPP1R42Q7Z4L9 355 aa19.19■□□□□ 0.66
SCRIB-202ENST00000356994 PUS7Q96PZ0 661 aaKnown RBP19.19■□□□□ 0.66
SCRIB-202ENST00000356994 NUP88Q99567 741 aaPredicted RBP19.19■□□□□ 0.66
SCRIB-202ENST00000356994 RBM27Q9P2N5 1060 aaKnown RBP19.19■□□□□ 0.66
SCRIB-202ENST00000356994 DESP17661 470 aa19.19■□□□□ 0.66
SCRIB-202ENST00000356994 ZNF76P36508 570 aa19.18■□□□□ 0.66
SCRIB-202ENST00000356994 ABCF2Q9UG63 623 aa19.18■□□□□ 0.66
SCRIB-202ENST00000356994 PEG3Q9GZU2 1588 aa19.18■□□□□ 0.66
SCRIB-202ENST00000356994 TMEM266Q2M3C6 531 aa19.18■□□□□ 0.66
SCRIB-202ENST00000356994 FAM200AQ8TCP9 573 aa19.18■□□□□ 0.66
SCRIB-202ENST00000356994 TRMT1Q9NXH9 659 aaKnown RBP19.18■□□□□ 0.66
SCRIB-202ENST00000356994 TFIP11Q9UBB9 837 aaKnown RBP19.18■□□□□ 0.66
SCRIB-202ENST00000356994 GUCY1B3Q02153 619 aa19.18■□□□□ 0.66
SCRIB-202ENST00000356994 CCDC102BQ68D86 513 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms