RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 DMTNQ08495 405 aa12.1□□□□□ -0.47
PTPRA-203ENST00000356147 PI4KAP1Q8N8J0 262 aa12.1□□□□□ -0.47
PTPRA-203ENST00000356147 ZNF592Q92610 1267 aa12.1□□□□□ -0.47
PTPRA-203ENST00000356147 SSH2Q76I76 1423 aa12.1□□□□□ -0.47
PTPRA-203ENST00000356147 CHAF1AQ13111 956 aaPredicted RBP12.1□□□□□ -0.47
PTPRA-203ENST00000356147 C14orf37Q86TY3 774 aa12.1□□□□□ -0.47
PTPRA-203ENST00000356147 FAM227BQ96M60 508 aa12.1□□□□□ -0.47
PTPRA-203ENST00000356147 TPCN1Q9ULQ1 816 aa12.1□□□□□ -0.47
PTPRA-203ENST00000356147 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.1□□□□□ -0.47
PTPRA-203ENST00000356147 GNAT3A8MTJ3 354 aa12.09□□□□□ -0.47
PTPRA-203ENST00000356147 CCDC192P0DO97 292 aa12.09□□□□□ -0.47
PTPRA-203ENST00000356147 CEBPZQ03701 1054 aaKnown RBP12.09□□□□□ -0.47
PTPRA-203ENST00000356147 NGDNQ8NEJ9 315 aaKnown RBP12.09□□□□□ -0.47
PTPRA-203ENST00000356147 DACT1Q9NYF0 836 aa12.09□□□□□ -0.47
PTPRA-203ENST00000356147 LETM1O95202 739 aaPredicted RBP12.09□□□□□ -0.47
PTPRA-203ENST00000356147 ANO6Q4KMQ2 910 aa12.09□□□□□ -0.47
PTPRA-203ENST00000356147 FBXW7Q969H0 707 aa12.09□□□□□ -0.47
PTPRA-203ENST00000356147 KIF1BPQ96EK5 621 aa12.09□□□□□ -0.47
PTPRA-203ENST00000356147 DDX11Q96FC9 970 aa12.09□□□□□ -0.47
PTPRA-203ENST00000356147 CHPF2Q9P2E5 772 aa12.09□□□□□ -0.47
PTPRA-203ENST00000356147 ATP6V1DQ9Y5K8 247 aa12.09□□□□□ -0.47
PTPRA-203ENST00000356147 RAB11FIP3O75154 756 aa12.09□□□□□ -0.47
PTPRA-203ENST00000356147 TYRO3Q06418 890 aa12.09□□□□□ -0.47
PTPRA-203ENST00000356147 TRIM5Q9C035 493 aa12.09□□□□□ -0.47
PTPRA-203ENST00000356147 CYP46A1Q9Y6A2 500 aa12.09□□□□□ -0.47
PTPRA-203ENST00000356147 MRVI1Q9Y6F6 885 aa12.09□□□□□ -0.47
PTPRA-203ENST00000356147 GTF2F1P35269 517 aaKnown RBP eCLIP12.08□□□□□ -0.48
PTPRA-203ENST00000356147 NUP62CLQ9H1M0 184 aa12.08□□□□□ -0.48
PTPRA-203ENST00000356147 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.08□□□□□ -0.483e-8■■■■■ 27.9
PTPRA-203ENST00000356147 V9GYY5 206 aaPredicted RBP12.08□□□□□ -0.48
PTPRA-203ENST00000356147 CEP170BQ9Y4F5 1589 aaPredicted RBP12.08□□□□□ -0.48
PTPRA-203ENST00000356147 PEAK1Q9H792 1746 aa12.08□□□□□ -0.48
PTPRA-203ENST00000356147 GOLGA6L4A6NEF3 574 aa12.08□□□□□ -0.48
PTPRA-203ENST00000356147 NLRP6P59044 892 aa12.08□□□□□ -0.48
PTPRA-203ENST00000356147 ARID5BQ14865 1188 aa12.08□□□□□ -0.48
PTPRA-203ENST00000356147 CCDC8Q9H0W5 538 aaPredicted RBP12.08□□□□□ -0.48
PTPRA-203ENST00000356147 MAP3K11Q16584 847 aa12.07□□□□□ -0.48
PTPRA-203ENST00000356147 CBX8Q9HC52 389 aa12.07□□□□□ -0.48
PTPRA-203ENST00000356147 RIMBP3CA6NJZ7 1639 aa12.07□□□□□ -0.48
PTPRA-203ENST00000356147 RIMBP3BA6NNM3 1639 aa12.07□□□□□ -0.48
PTPRA-203ENST00000356147 RIMBP3Q9UFD9 1639 aa12.07□□□□□ -0.48
PTPRA-203ENST00000356147 SIL1Q9H173 461 aa12.07□□□□□ -0.48
PTPRA-203ENST00000356147 DNAJC25Q9H1X3 360 aa12.07□□□□□ -0.48
PTPRA-203ENST00000356147 TNMDQ9H2S6 317 aa12.07□□□□□ -0.48
PTPRA-203ENST00000356147 RBM8AQ9Y5S9 174 aaKnown RBP12.07□□□□□ -0.48
PTPRA-203ENST00000356147 CHGBP05060 677 aa12.06□□□□□ -0.48
PTPRA-203ENST00000356147 EDC3Q96F86 508 aaKnown RBP12.06□□□□□ -0.48
PTPRA-203ENST00000356147 LGR6Q9HBX8 967 aa12.06□□□□□ -0.48
PTPRA-203ENST00000356147 POLA2Q14181 598 aa12.06□□□□□ -0.48
PTPRA-203ENST00000356147 LARP1Q6PKG0 1096 aaKnown RBP12.06□□□□□ -0.48
PTPRA-203ENST00000356147 FAM200AQ8TCP9 573 aa12.06□□□□□ -0.48
PTPRA-203ENST00000356147 NDUFB9Q9Y6M9 179 aa12.06□□□□□ -0.48
PTPRA-203ENST00000356147 OVOS2A0A0J9YW53 1432 aa12.06□□□□□ -0.48
PTPRA-203ENST00000356147 OVOS2Q6IE36 1432 aa12.06□□□□□ -0.48
PTPRA-203ENST00000356147 KRT85P78386 507 aa12.06□□□□□ -0.48
PTPRA-203ENST00000356147 CWF19L2Q2TBE0 894 aaKnown RBP12.06□□□□□ -0.48
PTPRA-203ENST00000356147 AACSQ86V21 672 aa12.06□□□□□ -0.48
PTPRA-203ENST00000356147 OSCARQ8IYS5 282 aa12.06□□□□□ -0.48
PTPRA-203ENST00000356147 KLHDC4Q8TBB5 520 aa12.06□□□□□ -0.48
PTPRA-203ENST00000356147 ERCC4Q92889 916 aaPredicted RBP12.06□□□□□ -0.48
PTPRA-203ENST00000356147 BOLA2Q9H3K6 86 aa12.06□□□□□ -0.48
PTPRA-203ENST00000356147 CCDC9Q9Y3X0 531 aaKnown RBP12.06□□□□□ -0.48
PTPRA-203ENST00000356147 NEO1Q92859 1461 aa12.05□□□□□ -0.48
PTPRA-203ENST00000356147 NPHP1O15259 732 aa12.05□□□□□ -0.48
PTPRA-203ENST00000356147 NR1I2O75469 434 aa12.05□□□□□ -0.48
PTPRA-203ENST00000356147 IFIT2P09913 472 aaKnown RBP12.05□□□□□ -0.48
PTPRA-203ENST00000356147 CREB3L3Q68CJ9 461 aa12.05□□□□□ -0.48
PTPRA-203ENST00000356147 CLASRPQ8N2M8 674 aaKnown RBP12.05□□□□□ -0.48
PTPRA-203ENST00000356147 BICD2Q8TD16 824 aa12.05□□□□□ -0.48
PTPRA-203ENST00000356147 GOLGA6L6A8MZA4 724 aa12.05□□□□□ -0.48
PTPRA-203ENST00000356147 JAK2O60674 1132 aa12.05□□□□□ -0.48
PTPRA-203ENST00000356147 TNNT1P13805 278 aa12.05□□□□□ -0.48
PTPRA-203ENST00000356147 NCBP1Q09161 790 aaKnown RBP12.05□□□□□ -0.48
PTPRA-203ENST00000356147 NMIQ13287 307 aaPredicted RBP12.05□□□□□ -0.48
PTPRA-203ENST00000356147 SPATA32Q96LK8 384 aa12.05□□□□□ -0.48
PTPRA-203ENST00000356147 ESF1Q9H501 851 aaKnown RBP12.05□□□□□ -0.48
PTPRA-203ENST00000356147 TLR7Q9NYK1 1049 aaKnown RBP12.05□□□□□ -0.48
PTPRA-203ENST00000356147 GLRX3O76003 335 aaKnown RBP12.04□□□□□ -0.48
PTPRA-203ENST00000356147 CCDC144BQ3MJ40 725 aa12.04□□□□□ -0.48
PTPRA-203ENST00000356147 VPS53Q5VIR6 699 aa12.04□□□□□ -0.48
PTPRA-203ENST00000356147 CYB5RLQ6IPT4 315 aa12.04□□□□□ -0.48
PTPRA-203ENST00000356147 CCDC144CPQ8IYA2 1237 aa12.04□□□□□ -0.48
PTPRA-203ENST00000356147 DNAAF4Q8WXU2 420 aa12.04□□□□□ -0.48
PTPRA-203ENST00000356147 LRRC2Q9BYS8 371 aa12.04□□□□□ -0.48
PTPRA-203ENST00000356147 ZSWIM6Q9HCJ5 1215 aa12.04□□□□□ -0.48
PTPRA-203ENST00000356147 C3P01024 1663 aa12.04□□□□□ -0.48
PTPRA-203ENST00000356147 USP6P35125 1406 aa12.04□□□□□ -0.48
PTPRA-203ENST00000356147 ZKSCAN1P17029 563 aaPredicted RBP12.04□□□□□ -0.48
PTPRA-203ENST00000356147 SYTL4Q96C24 671 aaPredicted RBP12.04□□□□□ -0.48
PTPRA-203ENST00000356147 IL17RAQ96F46 866 aa12.04□□□□□ -0.48
PTPRA-203ENST00000356147 C9orf78Q9NZ63 289 aaPredicted RBP12.04□□□□□ -0.48
PTPRA-203ENST00000356147 TUBGCP6Q96RT7 1819 aa12.04□□□□□ -0.48
PTPRA-203ENST00000356147 AOX1Q06278 1338 aa12.04□□□□□ -0.48
PTPRA-203ENST00000356147 IGSF1Q8N6C5 1336 aa12.04□□□□□ -0.48
PTPRA-203ENST00000356147 PRAMEF22A3QJZ6 481 aa12.04□□□□□ -0.48
PTPRA-203ENST00000356147 FAM69CQ0P6D2 419 aa12.04□□□□□ -0.48
PTPRA-203ENST00000356147 BEND3Q5T5X7 828 aa12.04□□□□□ -0.48
PTPRA-203ENST00000356147 CACTINQ8WUQ7 758 aaKnown RBP12.04□□□□□ -0.48
PTPRA-203ENST00000356147 FTOQ9C0B1 505 aaKnown RBP eCLIP12.04□□□□□ -0.48
PTPRA-203ENST00000356147 ARHGEF10O15013 1369 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms