RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 LRP10Q7Z4F1 713 aa22.05■■□□□ 1.12
PDLIM7-201ENST00000355572 RUNDC1Q96C34 613 aa22.05■■□□□ 1.12
PDLIM7-201ENST00000355572 TSPYL4Q9UJ04 414 aa22.05■■□□□ 1.12
PDLIM7-201ENST00000355572 TIAM2Q8IVF5 1701 aa22.05■■□□□ 1.12
PDLIM7-201ENST00000355572 MYL6BP14649 208 aa22.03■■□□□ 1.12
PDLIM7-201ENST00000355572 WDR43Q15061 677 aaKnown RBP eCLIP22.03■■□□□ 1.12
PDLIM7-201ENST00000355572 PDIA6Q15084 440 aa22.03■■□□□ 1.12
PDLIM7-201ENST00000355572 PROSER3Q2NL68 480 aa22.03■■□□□ 1.12
PDLIM7-201ENST00000355572 SETDB2Q96T68 719 aa22.03■■□□□ 1.12
PDLIM7-201ENST00000355572 ANKRD36CQ5JPF3 1778 aa22.02■■□□□ 1.12
PDLIM7-201ENST00000355572 ANXA1P04083 346 aa22.02■■□□□ 1.12
PDLIM7-201ENST00000355572 C9orf131Q5VYM1 1079 aa22.02■■□□□ 1.12
PDLIM7-201ENST00000355572 CNBD1Q8NA66 436 aa22.01■■□□□ 1.11
PDLIM7-201ENST00000355572 BRIP1Q9BX63 1249 aa22.01■■□□□ 1.11
PDLIM7-201ENST00000355572 DICER1Q9UPY3 1922 aaKnown RBP22.01■■□□□ 1.11
PDLIM7-201ENST00000355572 FAM177BA6PVY3 158 aa22■■□□□ 1.11
PDLIM7-201ENST00000355572 CLEC4GQ6UXB4 293 aa22■■□□□ 1.11
PDLIM7-201ENST00000355572 GPBP1L1Q9HC44 474 aaPredicted RBP22■■□□□ 1.11
PDLIM7-201ENST00000355572 SENP3-EIF4A1A0A087X0R7 540 aa21.99■■□□□ 1.11
PDLIM7-201ENST00000355572 H0YIN7 160 aa21.99■■□□□ 1.11
PDLIM7-201ENST00000355572 KIF3CO14782 793 aa21.99■■□□□ 1.11
PDLIM7-201ENST00000355572 NPM2Q86SE8 214 aaKnown RBP21.99■■□□□ 1.11
PDLIM7-201ENST00000355572 TTLL6Q8N841 843 aa21.99■■□□□ 1.11
PDLIM7-201ENST00000355572 NECTIN2Q92692 538 aa21.99■■□□□ 1.11
PDLIM7-201ENST00000355572 NIP7Q9Y221 180 aaKnown RBP eCLIP21.99■■□□□ 1.11
PDLIM7-201ENST00000355572 ABCC12Q96J65 1359 aa21.99■■□□□ 1.11
PDLIM7-201ENST00000355572 NFKBIEO00221 500 aa21.98■■□□□ 1.11
PDLIM7-201ENST00000355572 CHL1O00533 1208 aa21.98■■□□□ 1.11
PDLIM7-201ENST00000355572 EIF2S2P20042 333 aaKnown RBP21.98■■□□□ 1.11
PDLIM7-201ENST00000355572 ZNF622Q969S3 477 aaKnown RBP eCLIP21.98■■□□□ 1.11
PDLIM7-201ENST00000355572 ZBTB3Q9H5J0 574 aa21.98■■□□□ 1.11
PDLIM7-201ENST00000355572 ZNF219Q9P2Y4 722 aaPredicted RBP21.98■■□□□ 1.11
PDLIM7-201ENST00000355572 MAP3K15Q6ZN16 1313 aa21.98■■□□□ 1.11
PDLIM7-201ENST00000355572 UBN2Q6ZU65 1347 aa21.98■■□□□ 1.11
PDLIM7-201ENST00000355572 ZEB1P37275 1124 aaPredicted RBP21.97■■□□□ 1.11
PDLIM7-201ENST00000355572 NBPF5PQ86XG9 351 aaPredicted RBP21.97■■□□□ 1.11
PDLIM7-201ENST00000355572 RNF181Q9P0P0 153 aa21.97■■□□□ 1.11
PDLIM7-201ENST00000355572 LAMB2P55268 1798 aa21.97■■□□□ 1.11
PDLIM7-201ENST00000355572 APAF1O14727 1248 aa21.96■■□□□ 1.11
PDLIM7-201ENST00000355572 SRGNP10124 158 aa21.96■■□□□ 1.11
PDLIM7-201ENST00000355572 PDE6BP35913 854 aa21.96■■□□□ 1.11
PDLIM7-201ENST00000355572 LMOD3Q0VAK6 560 aa21.96■■□□□ 1.11
PDLIM7-201ENST00000355572 LAS1LQ9Y4W2 734 aaKnown RBP21.96■■□□□ 1.11
PDLIM7-201ENST00000355572 SLC51AQ86UW1 340 aa21.95■■□□□ 1.1
PDLIM7-201ENST00000355572 NMRK2Q9NPI5 230 aa21.95■■□□□ 1.1
PDLIM7-201ENST00000355572 ZNF652Q9Y2D9 606 aa21.95■■□□□ 1.1
PDLIM7-201ENST00000355572 ZNF316A6NFI3 1004 aaPredicted RBP21.94■■□□□ 1.1
PDLIM7-201ENST00000355572 C21orf2O43822 256 aa21.94■■□□□ 1.1
PDLIM7-201ENST00000355572 GPTP24298 496 aa21.94■■□□□ 1.1
PDLIM7-201ENST00000355572 ST5P78524 1137 aa21.94■■□□□ 1.1
PDLIM7-201ENST00000355572 NUTM1Q86Y26 1132 aa21.94■■□□□ 1.1
PDLIM7-201ENST00000355572 BABAM1Q9NWV8 329 aa21.94■■□□□ 1.1
PDLIM7-201ENST00000355572 ERVV-1B6SEH8 477 aa21.93■■□□□ 1.1
PDLIM7-201ENST00000355572 RGL2O15211 777 aa21.93■■□□□ 1.1
PDLIM7-201ENST00000355572 ERBB4Q15303 1308 aa21.92■■□□□ 1.1
PDLIM7-201ENST00000355572 KLRG2A4D1S0 409 aaPredicted RBP21.92■■□□□ 1.1
PDLIM7-201ENST00000355572 OLFM4Q6UX06 510 aa21.92■■□□□ 1.1
PDLIM7-201ENST00000355572 NPHP1O15259 732 aa21.91■■□□□ 1.1
PDLIM7-201ENST00000355572 SUSD4Q5VX71 490 aa21.91■■□□□ 1.1
PDLIM7-201ENST00000355572 STYK1Q6J9G0 422 aa21.91■■□□□ 1.1
PDLIM7-201ENST00000355572 PRPF40BQ6NWY9 871 aaKnown RBP21.91■■□□□ 1.1
PDLIM7-201ENST00000355572 ZNF34Q8IZ26 560 aa21.91■■□□□ 1.1
PDLIM7-201ENST00000355572 MBIPQ9NS73 344 aa21.91■■□□□ 1.1
PDLIM7-201ENST00000355572 TAF1P21675 1872 aa21.91■■□□□ 1.1
PDLIM7-201ENST00000355572 ZNF853P0CG23 659 aa21.9■■□□□ 1.1
PDLIM7-201ENST00000355572 ERFEQ4G0M1 354 aa21.9■■□□□ 1.1
PDLIM7-201ENST00000355572 KIF6Q6ZMV9 814 aa21.9■■□□□ 1.1
PDLIM7-201ENST00000355572 TPTE2Q6XPS3 522 aa21.89■■□□□ 1.09
PDLIM7-201ENST00000355572 GIGYF2Q6Y7W6 1299 aaKnown RBP21.89■■□□□ 1.09
PDLIM7-201ENST00000355572 C3orf67Q6ZVT6 689 aa21.89■■□□□ 1.09
PDLIM7-201ENST00000355572 C7orf43Q8WVR3 580 aa21.89■■□□□ 1.09
PDLIM7-201ENST00000355572 MASTLQ96GX5 879 aa21.89■■□□□ 1.09
PDLIM7-201ENST00000355572 NTSR2O95665 410 aa21.88■■□□□ 1.09
PDLIM7-201ENST00000355572 XAGE3Q8WTP9 111 aa21.88■■□□□ 1.09
PDLIM7-201ENST00000355572 CFAP44Q96MT7 982 aa21.88■■□□□ 1.09
PDLIM7-201ENST00000355572 CHPF2Q9P2E5 772 aa21.88■■□□□ 1.09
PDLIM7-201ENST00000355572 DDX60Q8IY21 1712 aaKnown RBP21.88■■□□□ 1.09
PDLIM7-201ENST00000355572 AIMP1Q12904 312 aaKnown RBP21.87■■□□□ 1.09
PDLIM7-201ENST00000355572 COPS6Q7L5N1 327 aa21.87■■□□□ 1.09
PDLIM7-201ENST00000355572 ZNF428Q96B54 188 aa21.87■■□□□ 1.09
PDLIM7-201ENST00000355572 PDZRN3Q9UPQ7 1066 aa21.87■■□□□ 1.09
PDLIM7-201ENST00000355572 SNED1Q8TER0 1413 aa21.87■■□□□ 1.09
PDLIM7-201ENST00000355572 LMNB1P20700 586 aa21.86■■□□□ 1.09
PDLIM7-201ENST00000355572 CNKSR1Q969H4 720 aa21.86■■□□□ 1.09
PDLIM7-201ENST00000355572 NPR1P16066 1061 aa21.85■■□□□ 1.09
PDLIM7-201ENST00000355572 SYNE4Q8N205 404 aa21.85■■□□□ 1.09
PDLIM7-201ENST00000355572 IBTKQ9P2D0 1353 aaPredicted RBP21.85■■□□□ 1.09
PDLIM7-201ENST00000355572 COL4A1P02462 1669 aa21.85■■□□□ 1.09
PDLIM7-201ENST00000355572 RIC1Q4ADV7 1423 aa21.84■■□□□ 1.09
PDLIM7-201ENST00000355572 CRY2Q49AN0 593 aa21.84■■□□□ 1.09
PDLIM7-201ENST00000355572 DUSP27Q5VZP5 1158 aa21.84■■□□□ 1.09
PDLIM7-201ENST00000355572 DDX21Q9NR30 783 aaKnown RBP eCLIP21.84■■□□□ 1.09
PDLIM7-201ENST00000355572 COL4A5P29400 1685 aa21.83■■□□□ 1.09
PDLIM7-201ENST00000355572 HDGFL1Q5TGJ6 251 aa21.83■■□□□ 1.09
PDLIM7-201ENST00000355572 RRAGCQ9HB90 399 aa21.83■■□□□ 1.09
PDLIM7-201ENST00000355572 WDR90Q96KV7 1748 aa21.83■■□□□ 1.08
PDLIM7-201ENST00000355572 LTBP3Q9NS15 1303 aa21.81■■□□□ 1.08
PDLIM7-201ENST00000355572 ELL2O00472 640 aaPredicted RBP21.81■■□□□ 1.08
PDLIM7-201ENST00000355572 C8orf58Q8NAV2 365 aa21.81■■□□□ 1.08
PDLIM7-201ENST00000355572 IFT57Q9NWB7 429 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms