RNA–Protein interactions for RNA: ENST00000350435.11

UBE2D3-205, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2 BASIC

Gene UBE2D3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-205ENST00000350435 EDC4Q6P2E9 1401 aaKnown RBP12.88□□□□□ -0.35
UBE2D3-205ENST00000350435 USP50Q70EL3 339 aaPredicted RBP12.88□□□□□ -0.35
UBE2D3-205ENST00000350435 HDGFL2Q7Z4V5 671 aaPredicted RBP12.88□□□□□ -0.35
UBE2D3-205ENST00000350435 SYNE4Q8N205 404 aa12.88□□□□□ -0.35
UBE2D3-205ENST00000350435 CNKSR1Q969H4 720 aa12.88□□□□□ -0.35
UBE2D3-205ENST00000350435 RBBP6Q7Z6E9 1792 aaKnown RBP12.87□□□□□ -0.35
UBE2D3-205ENST00000350435 PAPPA2Q9BXP8 1791 aa12.87□□□□□ -0.35
UBE2D3-205ENST00000350435 FBXO46Q6PJ61 603 aaPredicted RBP12.87□□□□□ -0.35
UBE2D3-205ENST00000350435 COL25A1Q9BXS0 654 aaPredicted RBP12.87□□□□□ -0.35
UBE2D3-205ENST00000350435 FZD9O00144 591 aa12.86□□□□□ -0.35
UBE2D3-205ENST00000350435 HUNKP57058 714 aa12.86□□□□□ -0.35
UBE2D3-205ENST00000350435 KIF23Q02241 960 aaPredicted RBP12.86□□□□□ -0.35
UBE2D3-205ENST00000350435 PRPF40BQ6NWY9 871 aaKnown RBP12.86□□□□□ -0.35
UBE2D3-205ENST00000350435 ZNF277Q9NRM2 450 aaPredicted RBP12.86□□□□□ -0.35
UBE2D3-205ENST00000350435 GJA3Q9Y6H8 435 aa12.86□□□□□ -0.35
UBE2D3-205ENST00000350435 BCORQ6W2J9 1755 aa12.86□□□□□ -0.35
UBE2D3-205ENST00000350435 FKBP4Q02790 459 aaKnown RBP eCLIP12.85□□□□□ -0.35
UBE2D3-205ENST00000350435 CCDC93Q567U6 631 aa12.85□□□□□ -0.35
UBE2D3-205ENST00000350435 COG3Q96JB2 828 aa12.85□□□□□ -0.35
UBE2D3-205ENST00000350435 BRIP1Q9BX63 1249 aa12.85□□□□□ -0.35
UBE2D3-205ENST00000350435 FBLN1P23142 703 aa12.84□□□□□ -0.35
UBE2D3-205ENST00000350435 EPS15P42566 896 aa12.84□□□□□ -0.35
UBE2D3-205ENST00000350435 IFNL2Q8IZJ0 200 aa12.84□□□□□ -0.35
UBE2D3-205ENST00000350435 OTUD5Q96G74 571 aa12.84□□□□□ -0.35
UBE2D3-205ENST00000350435 UNC80Q8N2C7 3258 aa12.84□□□□□ -0.35
UBE2D3-205ENST00000350435 TJP1Q07157 1748 aa12.83□□□□□ -0.36
UBE2D3-205ENST00000350435 POTEFA5A3E0 1075 aa12.83□□□□□ -0.36
UBE2D3-205ENST00000350435 EIF6P56537 245 aaKnown RBP12.83□□□□□ -0.36
UBE2D3-205ENST00000350435 RGMBQ6NW40 437 aa12.83□□□□□ -0.36
UBE2D3-205ENST00000350435 CCDC102AQ96A19 550 aa12.83□□□□□ -0.36
UBE2D3-205ENST00000350435 NARFQ9UHQ1 456 aa12.83□□□□□ -0.36
UBE2D3-205ENST00000350435 FAM155AB1AL88 458 aaPredicted RBP12.82□□□□□ -0.36
UBE2D3-205ENST00000350435 INTS3Q68E01 1043 aaKnown RBP12.82□□□□□ -0.36
UBE2D3-205ENST00000350435 STYK1Q6J9G0 422 aa12.82□□□□□ -0.36
UBE2D3-205ENST00000350435 CHRDL2Q6WN34 429 aa12.82□□□□□ -0.36
UBE2D3-205ENST00000350435 TMC1Q8TDI8 760 aa12.82□□□□□ -0.36
UBE2D3-205ENST00000350435 JDP2Q8WYK2 163 aa12.82□□□□□ -0.36
UBE2D3-205ENST00000350435 GLIS2Q9BZE0 524 aaPredicted RBP12.82□□□□□ -0.36
UBE2D3-205ENST00000350435 PTCD1O75127 700 aaKnown RBP12.81□□□□□ -0.36
UBE2D3-205ENST00000350435 PHKG2P15735 406 aa12.81□□□□□ -0.36
UBE2D3-205ENST00000350435 IARSP41252 1262 aaKnown RBP12.81□□□□□ -0.36
UBE2D3-205ENST00000350435 SCNN1DP51172 638 aa12.81□□□□□ -0.36
UBE2D3-205ENST00000350435 PRDM6Q9NQX0 595 aa12.81□□□□□ -0.36
UBE2D3-205ENST00000350435 CEP290O15078 2479 aa12.81□□□□□ -0.36
UBE2D3-205ENST00000350435 RRS1Q15050 365 aaKnown RBP12.8□□□□□ -0.36
UBE2D3-205ENST00000350435 INTS5Q6P9B9 1019 aaKnown RBP12.8□□□□□ -0.36
UBE2D3-205ENST00000350435 ZNF296Q8WUU4 475 aaPredicted RBP12.8□□□□□ -0.36
UBE2D3-205ENST00000350435 ERVV-2B6SEH9 535 aa12.79□□□□□ -0.36
UBE2D3-205ENST00000350435 H0YGN5 161 aa12.79□□□□□ -0.36
UBE2D3-205ENST00000350435 ZNF157P51786 506 aaPredicted RBP12.79□□□□□ -0.36
UBE2D3-205ENST00000350435 MASTLQ96GX5 879 aa12.79□□□□□ -0.36
UBE2D3-205ENST00000350435 CSRNP1Q96S65 589 aa12.79□□□□□ -0.36
UBE2D3-205ENST00000350435 ADARB2Q9NS39 739 aaKnown RBP12.79□□□□□ -0.36
UBE2D3-205ENST00000350435 TERF2IPQ9NYB0 399 aa12.79□□□□□ -0.36
UBE2D3-205ENST00000350435 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.79□□□□□ -0.36
UBE2D3-205ENST00000350435 REM2Q8IYK8 340 aaPredicted RBP12.78□□□□□ -0.36
UBE2D3-205ENST00000350435 RTKN2Q8IZC4 609 aa12.78□□□□□ -0.36
UBE2D3-205ENST00000350435 CCDC24Q8N4L8 307 aa12.78□□□□□ -0.36
UBE2D3-205ENST00000350435 BCL2L12Q9HB09 334 aa12.78□□□□□ -0.36
UBE2D3-205ENST00000350435 RBM27Q9P2N5 1060 aaKnown RBP12.78□□□□□ -0.36
UBE2D3-205ENST00000350435 SOS1Q07889 1333 aaPredicted RBP12.78□□□□□ -0.36
UBE2D3-205ENST00000350435 NPHP1O15259 732 aa12.77□□□□□ -0.37
UBE2D3-205ENST00000350435 SRGNP10124 158 aa12.77□□□□□ -0.37
UBE2D3-205ENST00000350435 HSP90AB2PQ58FF8 381 aa12.77□□□□□ -0.37
UBE2D3-205ENST00000350435 CDC37L1Q7L3B6 337 aa12.77□□□□□ -0.37
UBE2D3-205ENST00000350435 C7orf43Q8WVR3 580 aa12.77□□□□□ -0.37
UBE2D3-205ENST00000350435 A0A1W2PP64 1363 aa12.77□□□□□ -0.37
UBE2D3-205ENST00000350435 COL15A1P39059 1388 aa12.77□□□□□ -0.37
UBE2D3-205ENST00000350435 KIAA0100Q14667 2235 aaKnown RBP12.77□□□□□ -0.37
UBE2D3-205ENST00000350435 CENPFP49454 3210 aa12.77□□□□□ -0.37
UBE2D3-205ENST00000350435 PRR5LQ6MZQ0 368 aa12.76□□□□□ -0.37
UBE2D3-205ENST00000350435 EN2P19622 333 aaPredicted RBP12.75□□□□□ -0.37
UBE2D3-205ENST00000350435 COL9A1P20849 921 aa12.75□□□□□ -0.37
UBE2D3-205ENST00000350435 CABP4P57796 275 aa12.75□□□□□ -0.37
UBE2D3-205ENST00000350435 SLC12A5Q9H2X9 1139 aa12.75□□□□□ -0.37
UBE2D3-205ENST00000350435 ANKRD26Q9UPS8 1709 aa12.74□□□□□ -0.37
UBE2D3-205ENST00000350435 C2orf69Q8N8R5 385 aa12.74□□□□□ -0.37
UBE2D3-205ENST00000350435 BRCA2P51587 3418 aa12.74□□□□□ -0.37
UBE2D3-205ENST00000350435 RANBP2P49792 3224 aaKnown RBP12.74□□□□□ -0.37
UBE2D3-205ENST00000350435 FLT4P35916 1363 aa12.73□□□□□ -0.37
UBE2D3-205ENST00000350435 TBC1D8O95759 1140 aa12.73□□□□□ -0.37
UBE2D3-205ENST00000350435 SLC10A3P09131 477 aa12.73□□□□□ -0.37
UBE2D3-205ENST00000350435 ST5P78524 1137 aa12.73□□□□□ -0.37
UBE2D3-205ENST00000350435 ZC3H15Q8WU90 426 aaKnown RBP12.73□□□□□ -0.37
UBE2D3-205ENST00000350435 PGAP2Q9UHJ9 254 aa12.73□□□□□ -0.37
UBE2D3-205ENST00000350435 NCAPD2Q15021 1401 aa12.72□□□□□ -0.37
UBE2D3-205ENST00000350435 HTTP42858 3142 aa12.72□□□□□ -0.37
UBE2D3-205ENST00000350435 HSP90AB1P08238 724 aaKnown RBP12.72□□□□□ -0.37
UBE2D3-205ENST00000350435 CNBD1Q8NA66 436 aa12.72□□□□□ -0.37
UBE2D3-205ENST00000350435 GBA2Q9HCG7 927 aaPredicted RBP12.72□□□□□ -0.37
UBE2D3-205ENST00000350435 FOXD4L1Q9NU39 408 aa12.72□□□□□ -0.37
UBE2D3-205ENST00000350435 GPRC5DQ9NZD1 345 aa12.72□□□□□ -0.37
UBE2D3-205ENST00000350435 TONSLQ96HA7 1378 aa12.71□□□□□ -0.37
UBE2D3-205ENST00000350435 GPR25O00155 361 aa12.71□□□□□ -0.37
UBE2D3-205ENST00000350435 TBC1D9BQ66K14 1250 aa12.71□□□□□ -0.37
UBE2D3-205ENST00000350435 OLFM4Q6UX06 510 aa12.71□□□□□ -0.37
UBE2D3-205ENST00000350435 ANKRD13DQ6ZTN6 518 aa12.71□□□□□ -0.37
UBE2D3-205ENST00000350435 FKTNO75072 461 aa12.7□□□□□ -0.38
UBE2D3-205ENST00000350435 PLA2G5P39877 138 aa12.7□□□□□ -0.38
UBE2D3-205ENST00000350435 NOM1Q5C9Z4 860 aaKnown RBP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 1188.9 ms