RNA–Protein interactions for RNA: ENST00000341547.8

LMO7-202, Transcript of LIM domain 7, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LMO7, Length 7,237 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-202ENST00000341547 NEBLO76041 1014 aa8.59□□□□□ -1.03
LMO7-202ENST00000341547 RBM42Q9BTD8 480 aaKnown RBP8.59□□□□□ -1.03
LMO7-202ENST00000341547 UBA5Q9GZZ9 404 aa8.59□□□□□ -1.03
LMO7-202ENST00000341547 RBM28Q9NW13 759 aaKnown RBP8.59□□□□□ -1.03
LMO7-202ENST00000341547 ZNF76P36508 570 aa8.59□□□□□ -1.03
LMO7-202ENST00000341547 CCDC96Q2M329 555 aa8.59□□□□□ -1.03
LMO7-202ENST00000341547 CFAP70Q5T0N1 1121 aa8.59□□□□□ -1.03
LMO7-202ENST00000341547 CEP57Q86XR8 500 aa8.59□□□□□ -1.03
LMO7-202ENST00000341547 TMX3Q96JJ7 454 aa8.59□□□□□ -1.03
LMO7-202ENST00000341547 PUS7Q96PZ0 661 aaKnown RBP8.59□□□□□ -1.03
LMO7-202ENST00000341547 IDH1O75874 414 aaKnown RBP8.59□□□□□ -1.03
LMO7-202ENST00000341547 ANO6Q4KMQ2 910 aa8.59□□□□□ -1.03
LMO7-202ENST00000341547 HSP90AA4PQ58FG1 418 aa8.59□□□□□ -1.03
LMO7-202ENST00000341547 NCAPD3P42695 1498 aa8.59□□□□□ -1.03
LMO7-202ENST00000341547 FANCD2Q9BXW9 1451 aa8.59□□□□□ -1.03
LMO7-202ENST00000341547 C9orf84Q5VXU9 1444 aa8.59□□□□□ -1.03
LMO7-202ENST00000341547 OPA1O60313 960 aa8.59□□□□□ -1.04
LMO7-202ENST00000341547 PPFIA3O75145 1194 aa8.59□□□□□ -1.04
LMO7-202ENST00000341547 CETN2P41208 172 aa8.59□□□□□ -1.04
LMO7-202ENST00000341547 GBP6Q6ZN66 633 aa8.59□□□□□ -1.04
LMO7-202ENST00000341547 EHBP1Q8NDI1 1231 aa8.59□□□□□ -1.04
LMO7-202ENST00000341547 MPHOSPH8Q99549 860 aa8.59□□□□□ -1.04
LMO7-202ENST00000341547 MIS18AQ9NYP9 233 aa8.59□□□□□ -1.04
LMO7-202ENST00000341547 YEATS4O95619 227 aa8.58□□□□□ -1.04
LMO7-202ENST00000341547 LARP1Q6PKG0 1096 aaKnown RBP8.58□□□□□ -1.04
LMO7-202ENST00000341547 RBSNQ9H1K0 784 aa8.58□□□□□ -1.04
LMO7-202ENST00000341547 TMPOP42166 694 aaKnown RBP8.58□□□□□ -1.04
LMO7-202ENST00000341547 SPECC1LQ69YQ0 1117 aa8.58□□□□□ -1.04
LMO7-202ENST00000341547 SSH1Q8WYL5 1049 aa8.58□□□□□ -1.04
LMO7-202ENST00000341547 PPP1R9BQ96SB3 815 aa8.58□□□□□ -1.04
LMO7-202ENST00000341547 NAA15Q9BXJ9 866 aaKnown RBP8.58□□□□□ -1.04
LMO7-202ENST00000341547 CTNNA3Q9UI47 895 aa8.58□□□□□ -1.04
LMO7-202ENST00000341547 FCHSD2O94868 740 aa8.58□□□□□ -1.04
LMO7-202ENST00000341547 U2AF2P26368 475 aaKnown RBP eCLIP8.58□□□□□ -1.042e-7■■■□□ 18.3
LMO7-202ENST00000341547 HOOK3Q86VS8 718 aa8.58□□□□□ -1.04
LMO7-202ENST00000341547 PAIP2Q9BPZ3 127 aaKnown RBP8.58□□□□□ -1.04
LMO7-202ENST00000341547 GNL3LQ9NVN8 582 aaKnown RBP8.58□□□□□ -1.04
LMO7-202ENST00000341547 RIOK3O14730 519 aaKnown RBP8.58□□□□□ -1.04
LMO7-202ENST00000341547 CTAGE15A4D2H0 777 aa8.58□□□□□ -1.04
LMO7-202ENST00000341547 CTAGE8P0CG41 777 aa8.58□□□□□ -1.04
LMO7-202ENST00000341547 CTAGE6Q86UF2 777 aa8.58□□□□□ -1.04
LMO7-202ENST00000341547 CTAGE4Q8IX94 777 aa8.58□□□□□ -1.04
LMO7-202ENST00000341547 FBF1Q8TES7 1133 aa8.58□□□□□ -1.04
LMO7-202ENST00000341547 VPS18Q9P253 973 aa8.58□□□□□ -1.04
LMO7-202ENST00000341547 KDM2BQ8NHM5 1336 aa8.58□□□□□ -1.04
LMO7-202ENST00000341547 MINDY4BA8MYZ0 360 aa8.57□□□□□ -1.04
LMO7-202ENST00000341547 CLGNO14967 610 aa8.57□□□□□ -1.04
LMO7-202ENST00000341547 TUBBP07437 444 aa8.57□□□□□ -1.04
LMO7-202ENST00000341547 PPM1EQ8WY54 764 aa8.57□□□□□ -1.04
LMO7-202ENST00000341547 LRP2BPQ9P2M1 347 aa8.57□□□□□ -1.04
LMO7-202ENST00000341547 U3KPZ7 1027 aaPredicted RBP8.57□□□□□ -1.04
LMO7-202ENST00000341547 RNF123Q5XPI4 1314 aa8.57□□□□□ -1.04
LMO7-202ENST00000341547 EBAG9O00559 213 aa8.57□□□□□ -1.04
LMO7-202ENST00000341547 GAPVD1Q14C86 1478 aa8.57□□□□□ -1.04
LMO7-202ENST00000341547 TRIM27P14373 513 aa8.57□□□□□ -1.04
LMO7-202ENST00000341547 CTCFLQ8NI51 663 aaPredicted RBP8.57□□□□□ -1.04
LMO7-202ENST00000341547 ATRIPQ8WXE1 791 aa8.57□□□□□ -1.04
LMO7-202ENST00000341547 NSD3Q9BZ95 1437 aa8.57□□□□□ -1.04
LMO7-202ENST00000341547 ATAD2Q6PL18 1390 aa8.57□□□□□ -1.04
LMO7-202ENST00000341547 DNAI1Q9UI46 699 aa8.57□□□□□ -1.04
LMO7-202ENST00000341547 CNPY2Q9Y2B0 182 aa8.57□□□□□ -1.04
LMO7-202ENST00000341547 HMGB1P09429 215 aaKnown RBP8.57□□□□□ -1.04
LMO7-202ENST00000341547 PTGS1P23219 599 aa8.57□□□□□ -1.04
LMO7-202ENST00000341547 MSL1Q68DK7 614 aa8.57□□□□□ -1.04
LMO7-202ENST00000341547 ZSCAN25Q6NSZ9 544 aa8.57□□□□□ -1.04
LMO7-202ENST00000341547 ALS2CR12Q96Q35 445 aa8.57□□□□□ -1.04
LMO7-202ENST00000341547 PPP1R12BO60237 982 aaPredicted RBP8.57□□□□□ -1.04
LMO7-202ENST00000341547 POLR3DP05423 398 aaPredicted RBP8.57□□□□□ -1.04
LMO7-202ENST00000341547 CCDC6Q16204 474 aa8.57□□□□□ -1.04
LMO7-202ENST00000341547 HDXQ7Z353 690 aa8.57□□□□□ -1.04
LMO7-202ENST00000341547 SPATA24Q86W54 205 aa8.57□□□□□ -1.04
LMO7-202ENST00000341547 ABCF2Q9UG63 623 aa8.57□□□□□ -1.04
LMO7-202ENST00000341547 DESP17661 470 aa8.56□□□□□ -1.04
LMO7-202ENST00000341547 NFE2L2Q16236 605 aa8.56□□□□□ -1.04
LMO7-202ENST00000341547 VPS36Q86VN1 386 aa8.56□□□□□ -1.04
LMO7-202ENST00000341547 HYPKQ9NX55 129 aa8.56□□□□□ -1.04
LMO7-202ENST00000341547 MTIF2P46199 727 aaKnown RBP8.56□□□□□ -1.04
LMO7-202ENST00000341547 POTEDQ86YR6 584 aa8.56□□□□□ -1.04
LMO7-202ENST00000341547 CCDC144CPQ8IYA2 1237 aa8.56□□□□□ -1.04
LMO7-202ENST00000341547 TAOK3Q9H2K8 898 aa8.56□□□□□ -1.04
LMO7-202ENST00000341547 CCDC141Q6ZP82 1450 aa8.56□□□□□ -1.04
LMO7-202ENST00000341547 VGLL3A8MV65 326 aa8.56□□□□□ -1.04
LMO7-202ENST00000341547 GLRX3O76003 335 aaKnown RBP8.56□□□□□ -1.04
LMO7-202ENST00000341547 PIP4K2BP78356 416 aa8.56□□□□□ -1.04
LMO7-202ENST00000341547 PLEKHO1Q53GL0 409 aaPredicted RBP8.56□□□□□ -1.04
LMO7-202ENST00000341547 DNAJC21Q5F1R6 531 aaKnown RBP8.56□□□□□ -1.04
LMO7-202ENST00000341547 THUMPD2Q9BTF0 503 aaKnown RBP8.56□□□□□ -1.04
LMO7-202ENST00000341547 ZSCAN16Q9H4T2 348 aaPredicted RBP8.56□□□□□ -1.04
LMO7-202ENST00000341547 MYO1BO43795 1136 aa8.56□□□□□ -1.04
LMO7-202ENST00000341547 POTEJP0CG39 1038 aa8.56□□□□□ -1.04
LMO7-202ENST00000341547 RBM5P52756 815 aaKnown RBP eCLIP8.56□□□□□ -1.04
LMO7-202ENST00000341547 UBASH3AP57075 661 aa8.56□□□□□ -1.04
LMO7-202ENST00000341547 SPTY2D1Q68D10 685 aaPredicted RBP8.56□□□□□ -1.04
LMO7-202ENST00000341547 KIF1BPQ96EK5 621 aa8.56□□□□□ -1.04
LMO7-202ENST00000341547 RSRC1Q96IZ7 334 aaKnown RBP8.56□□□□□ -1.04
LMO7-202ENST00000341547 SCLT1Q96NL6 688 aa8.56□□□□□ -1.04
LMO7-202ENST00000341547 PSMD1Q99460 953 aa8.56□□□□□ -1.04
LMO7-202ENST00000341547 TSG101Q99816 390 aa8.56□□□□□ -1.04
LMO7-202ENST00000341547 CEP126Q9P2H0 1117 aa8.56□□□□□ -1.04
LMO7-202ENST00000341547 F13A1P00488 732 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms