RNA–Protein interactions for RNA: ENST00000341259.6

SH2B3-201, Transcript of SH2B adaptor protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2B3, Length 5,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2B3-201ENST00000341259 COPS6Q7L5N1 327 aa22.58■■□□□ 1.21
SH2B3-201ENST00000341259 SNRKQ9NRH2 765 aa22.58■■□□□ 1.2
SH2B3-201ENST00000341259 ZNHIT6Q9NWK9 470 aaKnown RBP22.58■■□□□ 1.2
SH2B3-201ENST00000341259 KRT24Q2M2I5 525 aa22.57■■□□□ 1.2
SH2B3-201ENST00000341259 TARBP1Q13395 1621 aaKnown RBP22.57■■□□□ 1.2
SH2B3-201ENST00000341259 TTF1Q15361 905 aaPredicted RBP22.57■■□□□ 1.2
SH2B3-201ENST00000341259 VSIG10Q8N0Z9 540 aa22.57■■□□□ 1.2
SH2B3-201ENST00000341259 DZIP1Q86YF9 867 aaKnown RBP22.57■■□□□ 1.2
SH2B3-201ENST00000341259 AK7Q96M32 723 aa22.57■■□□□ 1.2
SH2B3-201ENST00000341259 SLC12A7Q9Y666 1083 aa22.57■■□□□ 1.2
SH2B3-201ENST00000341259 CCDC196A0A1B0GTZ2 297 aa22.56■■□□□ 1.2
SH2B3-201ENST00000341259 GOLGA8BA8MQT2 603 aa22.56■■□□□ 1.2
SH2B3-201ENST00000341259 POLR3DP05423 398 aaPredicted RBP22.56■■□□□ 1.2
SH2B3-201ENST00000341259 CCT2P78371 535 aaKnown RBP22.56■■□□□ 1.2
SH2B3-201ENST00000341259 ZHX3Q9H4I2 956 aa22.56■■□□□ 1.2
SH2B3-201ENST00000341259 ZNF287Q9HBT7 754 aa22.56■■□□□ 1.2
SH2B3-201ENST00000341259 MTERF4Q7Z6M4 381 aaKnown RBP22.56■■□□□ 1.2
SH2B3-201ENST00000341259 C16orf71Q8IYS4 520 aaPredicted RBP22.56■■□□□ 1.2
SH2B3-201ENST00000341259 ATP10AO60312 1499 aa22.56■■□□□ 1.2
SH2B3-201ENST00000341259 ESPNB1AK53 854 aa22.56■■□□□ 1.2
SH2B3-201ENST00000341259 GRM8O00222 908 aa22.56■■□□□ 1.2
SH2B3-201ENST00000341259 HMGB2P26583 209 aaKnown RBP22.56■■□□□ 1.2
SH2B3-201ENST00000341259 HOXC9P31274 260 aa22.56■■□□□ 1.2
SH2B3-201ENST00000341259 HMG20BQ9P0W2 317 aa22.56■■□□□ 1.2
SH2B3-201ENST00000341259 NGLY1Q96IV0 654 aa22.55■■□□□ 1.2
SH2B3-201ENST00000341259 PRM3Q9NNZ6 103 aa22.55■■□□□ 1.2
SH2B3-201ENST00000341259 MKNK2Q9HBH9 465 aa22.55■■□□□ 1.2
SH2B3-201ENST00000341259 ZBTB40Q9NUA8 1239 aa22.55■■□□□ 1.2
SH2B3-201ENST00000341259 ZMYM4Q5VZL5 1548 aa22.55■■□□□ 1.2
SH2B3-201ENST00000341259 STX6O43752 255 aa22.55■■□□□ 1.2
SH2B3-201ENST00000341259 HSP90B2PQ58FF3 399 aa22.55■■□□□ 1.2
SH2B3-201ENST00000341259 CEP85Q6P2H3 762 aa22.55■■□□□ 1.2
SH2B3-201ENST00000341259 ARHGEF5Q12774 1597 aa22.54■■□□□ 1.2
SH2B3-201ENST00000341259 NEK1Q96PY6 1258 aa22.54■■□□□ 1.2
SH2B3-201ENST00000341259 ESYT1Q9BSJ8 1104 aa22.54■■□□□ 1.2
SH2B3-201ENST00000341259 RNF41Q9H4P4 317 aaPredicted RBP22.54■■□□□ 1.2
SH2B3-201ENST00000341259 DMRT2Q9Y5R5 561 aa22.54■■□□□ 1.2
SH2B3-201ENST00000341259 RANBP6O60518 1105 aaKnown RBP22.54■■□□□ 1.2
SH2B3-201ENST00000341259 GOLGA8AA7E2F4 631 aa22.54■■□□□ 1.2
SH2B3-201ENST00000341259 KCNA6P17658 529 aa22.54■■□□□ 1.2
SH2B3-201ENST00000341259 MAP3K19Q56UN5 1328 aa22.54■■□□□ 1.2
SH2B3-201ENST00000341259 IFIT3O14879 490 aaKnown RBP22.53■■□□□ 1.2
SH2B3-201ENST00000341259 MAP7D2Q96T17 732 aa22.53■■□□□ 1.2
SH2B3-201ENST00000341259 BAG4O95429 457 aaKnown RBP22.53■■□□□ 1.2
SH2B3-201ENST00000341259 FILIP1Q7Z7B0 1213 aa22.53■■□□□ 1.2
SH2B3-201ENST00000341259 EDC4Q6P2E9 1401 aaKnown RBP22.53■■□□□ 1.2
SH2B3-201ENST00000341259 TANGO6Q9C0B7 1094 aa22.52■■□□□ 1.2
SH2B3-201ENST00000341259 DCTPP1Q9H773 170 aa22.52■■□□□ 1.2
SH2B3-201ENST00000341259 SSRP1Q08945 709 aaKnown RBP22.52■■□□□ 1.2
SH2B3-201ENST00000341259 ODF2Q5BJF6 829 aa22.52■■□□□ 1.2
SH2B3-201ENST00000341259 TMX3Q96JJ7 454 aa22.52■■□□□ 1.2
SH2B3-201ENST00000341259 CDC5LQ99459 802 aaKnown RBP22.52■■□□□ 1.2
SH2B3-201ENST00000341259 GDPD2Q9HCC8 539 aa22.52■■□□□ 1.2
SH2B3-201ENST00000341259 MPHOSPH10O00566 681 aaKnown RBP22.52■■□□□ 1.2
SH2B3-201ENST00000341259 DDX46Q7L014 1031 aaKnown RBP22.52■■□□□ 1.2
SH2B3-201ENST00000341259 CTCFLQ8NI51 663 aaPredicted RBP22.52■■□□□ 1.2
SH2B3-201ENST00000341259 IQCA1Q86XH1 822 aa22.52■■□□□ 1.19
SH2B3-201ENST00000341259 TBX22Q9Y458 520 aa22.52■■□□□ 1.19
SH2B3-201ENST00000341259 SSBP05455 408 aaKnown RBP eCLIP22.51■■□□□ 1.19
SH2B3-201ENST00000341259 IL13P35225 146 aa22.51■■□□□ 1.19
SH2B3-201ENST00000341259 CCDC82Q8N4S0 544 aa22.51■■□□□ 1.19
SH2B3-201ENST00000341259 CCDC112Q8NEF3 446 aa22.51■■□□□ 1.19
SH2B3-201ENST00000341259 CABLES1Q8TDN4 633 aa22.51■■□□□ 1.19
SH2B3-201ENST00000341259 RPGRQ92834 1020 aaKnown RBP22.51■■□□□ 1.19
SH2B3-201ENST00000341259 ANO10Q9NW15 660 aa22.51■■□□□ 1.19
SH2B3-201ENST00000341259 HAND2P61296 217 aa22.5■■□□□ 1.19
SH2B3-201ENST00000341259 BMP2KQ9NSY1 1161 aaPredicted RBP22.5■■□□□ 1.19
SH2B3-201ENST00000341259 SEC63Q9UGP8 760 aaKnown RBP22.5■■□□□ 1.19
SH2B3-201ENST00000341259 GCP02774 474 aa22.5■■□□□ 1.19
SH2B3-201ENST00000341259 ERCC4Q92889 916 aaPredicted RBP22.5■■□□□ 1.19
SH2B3-201ENST00000341259 ZSCAN30Q86W11 494 aa22.49■■□□□ 1.19
SH2B3-201ENST00000341259 IP6K1Q92551 441 aa22.49■■□□□ 1.19
SH2B3-201ENST00000341259 C19orf44Q9H6X5 657 aa22.49■■□□□ 1.19
SH2B3-201ENST00000341259 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.49■■□□□ 1.192e-8■■■■■ 27.1
SH2B3-201ENST00000341259 NFATC2IPQ8NCF5 419 aa22.49■■□□□ 1.19
SH2B3-201ENST00000341259 DEF6Q9H4E7 631 aa22.48■■□□□ 1.19
SH2B3-201ENST00000341259 LMBR1LQ6UX01 489 aa22.48■■□□□ 1.19
SH2B3-201ENST00000341259 SMC5Q8IY18 1101 aa22.48■■□□□ 1.19
SH2B3-201ENST00000341259 PA2G4Q9UQ80 394 aaKnown RBP22.48■■□□□ 1.19
SH2B3-201ENST00000341259 USP16Q9Y5T5 823 aa22.48■■□□□ 1.19
SH2B3-201ENST00000341259 TMEM132AQ24JP5 1023 aa22.48■■□□□ 1.19
SH2B3-201ENST00000341259 RBM10P98175 930 aaKnown RBP22.48■■□□□ 1.19
SH2B3-201ENST00000341259 ZFYVE27Q5T4F4 411 aa22.48■■□□□ 1.19
SH2B3-201ENST00000341259 ZNF444Q8N0Y2 327 aaPredicted RBP22.48■■□□□ 1.19
SH2B3-201ENST00000341259 LINS1Q8NG48 757 aa22.48■■□□□ 1.19
SH2B3-201ENST00000341259 UQCRFS1P1P0C7P4 283 aa22.47■■□□□ 1.19
SH2B3-201ENST00000341259 CFAP100Q494V2 611 aa22.47■■□□□ 1.19
SH2B3-201ENST00000341259 NCOA7Q8NI08 942 aa22.47■■□□□ 1.19
SH2B3-201ENST00000341259 ANAPC15P60006 121 aa22.47■■□□□ 1.19
SH2B3-201ENST00000341259 SETQ01105 290 aaPredicted RBP22.47■■□□□ 1.19
SH2B3-201ENST00000341259 FAM177A1Q8N128 213 aaPredicted RBP22.47■■□□□ 1.19
SH2B3-201ENST00000341259 TMOD2Q9NZR1 351 aa22.47■■□□□ 1.19
SH2B3-201ENST00000341259 TFIP11Q9UBB9 837 aaKnown RBP22.47■■□□□ 1.19
SH2B3-201ENST00000341259 ZNF76P36508 570 aa22.47■■□□□ 1.19
SH2B3-201ENST00000341259 CDR1P51861 262 aa22.47■■□□□ 1.19
SH2B3-201ENST00000341259 TMEM67Q5HYA8 995 aa22.47■■□□□ 1.19
SH2B3-201ENST00000341259 RNMTO43148 476 aaKnown RBP22.46■■□□□ 1.19
SH2B3-201ENST00000341259 SYCP1Q15431 976 aa22.46■■□□□ 1.19
SH2B3-201ENST00000341259 CKAP2LQ8IYA6 745 aa22.46■■□□□ 1.19
SH2B3-201ENST00000341259 PTPRTO14522 1441 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms