RNA–Protein interactions for RNA: ENST00000341255.3

RTL6-201, Transcript of retrotransposon Gag like 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTL6, Length 5,495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6-201ENST00000341255 GSDMDP57764 484 aa18.81■□□□□ 0.6
RTL6-201ENST00000341255 CCT2P78371 535 aaKnown RBP18.81■□□□□ 0.6
RTL6-201ENST00000341255 CPLX3Q8WVH0 158 aa18.81■□□□□ 0.6
RTL6-201ENST00000341255 SLC12A7Q9Y666 1083 aa18.81■□□□□ 0.6
RTL6-201ENST00000341255 MPHOSPH10O00566 681 aaKnown RBP18.8■□□□□ 0.6
RTL6-201ENST00000341255 UBE2HP62256 183 aa18.8■□□□□ 0.6
RTL6-201ENST00000341255 STX1AQ16623 288 aa18.8■□□□□ 0.6
RTL6-201ENST00000341255 LRSAM1Q6UWE0 723 aa18.8■□□□□ 0.6
RTL6-201ENST00000341255 TRERF1Q96PN7 1200 aa18.8■□□□□ 0.6
RTL6-201ENST00000341255 LAMC3Q9Y6N6 1575 aa18.8■□□□□ 0.6
RTL6-201ENST00000341255 BIN1O00499 593 aa18.8■□□□□ 0.6
RTL6-201ENST00000341255 ZNF165P49910 485 aa18.8■□□□□ 0.6
RTL6-201ENST00000341255 TSHZ3Q63HK5 1081 aa18.8■□□□□ 0.6
RTL6-201ENST00000341255 CALCOCO1Q9P1Z2 691 aa18.8■□□□□ 0.6
RTL6-201ENST00000341255 PPP1R12BO60237 982 aaPredicted RBP18.8■□□□□ 0.6
RTL6-201ENST00000341255 HCLS1P14317 486 aaPredicted RBP18.8■□□□□ 0.6
RTL6-201ENST00000341255 CLCN1P35523 988 aa18.8■□□□□ 0.6
RTL6-201ENST00000341255 CNNM3Q8NE01 707 aa18.8■□□□□ 0.6
RTL6-201ENST00000341255 MBIPQ9NS73 344 aa18.8■□□□□ 0.6
RTL6-201ENST00000341255 RANBP6O60518 1105 aaKnown RBP18.79■□□□□ 0.6
RTL6-201ENST00000341255 CRACR2BQ8N4Y2 399 aaPredicted RBP18.79■□□□□ 0.6
RTL6-201ENST00000341255 ZHX1Q9UKY1 873 aaPredicted RBP18.79■□□□□ 0.6
RTL6-201ENST00000341255 ANKRD18AQ8IVF6 992 aa18.79■□□□□ 0.6
RTL6-201ENST00000341255 ANKIB1Q9P2G1 1089 aa18.79■□□□□ 0.6
RTL6-201ENST00000341255 ANKRD36BQ8N2N9 1353 aa18.79■□□□□ 0.6
RTL6-201ENST00000341255 PANK2Q9BZ23 570 aa18.79■□□□□ 0.6
RTL6-201ENST00000341255 PRIMPOLQ96LW4 560 aa18.79■□□□□ 0.6
RTL6-201ENST00000341255 MAP3K2Q9Y2U5 619 aa18.79■□□□□ 0.6
RTL6-201ENST00000341255 NUCB1Q02818 461 aa18.78■□□□□ 0.6
RTL6-201ENST00000341255 CCDC82Q8N4S0 544 aa18.78■□□□□ 0.6
RTL6-201ENST00000341255 DISP3Q9P2K9 1392 aa18.78■□□□□ 0.6
RTL6-201ENST00000341255 GTF2F1P35269 517 aaKnown RBP eCLIP18.78■□□□□ 0.6
RTL6-201ENST00000341255 IFNL2Q8IZJ0 200 aa18.78■□□□□ 0.6
RTL6-201ENST00000341255 PIK3R4Q99570 1358 aa18.78■□□□□ 0.6
RTL6-201ENST00000341255 SNW1Q13573 536 aaKnown RBP18.78■□□□□ 0.6
RTL6-201ENST00000341255 FKBP15Q5T1M5 1219 aa18.78■□□□□ 0.6
RTL6-201ENST00000341255 GIMAP6Q6P9H5 292 aa18.78■□□□□ 0.6
RTL6-201ENST00000341255 TMX3Q96JJ7 454 aa18.78■□□□□ 0.6
RTL6-201ENST00000341255 NUP88Q99567 741 aaPredicted RBP18.78■□□□□ 0.6
RTL6-201ENST00000341255 GOLGA8BA8MQT2 603 aa18.77■□□□□ 0.6
RTL6-201ENST00000341255 IFIT3O14879 490 aaKnown RBP18.77■□□□□ 0.6
RTL6-201ENST00000341255 ZNF444Q8N0Y2 327 aaPredicted RBP18.77■□□□□ 0.6
RTL6-201ENST00000341255 ZNF830Q96NB3 372 aaPredicted RBP18.77■□□□□ 0.6
RTL6-201ENST00000341255 TEX13AQ9BXU3 409 aaPredicted RBP18.77■□□□□ 0.6
RTL6-201ENST00000341255 ZBTB3Q9H5J0 574 aa18.77■□□□□ 0.6
RTL6-201ENST00000341255 RAB34Q9BZG1 259 aa18.77■□□□□ 0.6
RTL6-201ENST00000341255 MCM3P25205 808 aa18.77■□□□□ 0.6
RTL6-201ENST00000341255 HDAC1Q13547 482 aaPredicted RBP18.77■□□□□ 0.6
RTL6-201ENST00000341255 PCDHB15Q9Y5E8 787 aa18.77■□□□□ 0.6
RTL6-201ENST00000341255 CEP135Q66GS9 1140 aa18.77■□□□□ 0.59
RTL6-201ENST00000341255 GOLGA8AA7E2F4 631 aa18.76■□□□□ 0.59
RTL6-201ENST00000341255 PI4KAP2A4QPH2 592 aa18.76■□□□□ 0.59
RTL6-201ENST00000341255 PI4KAP1Q8N8J0 262 aa18.76■□□□□ 0.59
RTL6-201ENST00000341255 TNIP1Q15025 636 aa18.76■□□□□ 0.59
RTL6-201ENST00000341255 C8orf34Q49A92 452 aa18.76■□□□□ 0.59
RTL6-201ENST00000341255 PPP1R42Q7Z4L9 355 aa18.76■□□□□ 0.59
RTL6-201ENST00000341255 SSRP1Q08945 709 aaKnown RBP18.76■□□□□ 0.59
RTL6-201ENST00000341255 TTF1Q15361 905 aaPredicted RBP18.75■□□□□ 0.59
RTL6-201ENST00000341255 CACNA2D4Q7Z3S7 1137 aa18.75■□□□□ 0.59
RTL6-201ENST00000341255 DENND4BO75064 1496 aaPredicted RBP18.75■□□□□ 0.59
RTL6-201ENST00000341255 ARHGAP45Q92619 1136 aa18.75■□□□□ 0.59
RTL6-201ENST00000341255 FAM83GA6ND36 823 aa18.75■□□□□ 0.59
RTL6-201ENST00000341255 EXOC5O00471 708 aa18.75■□□□□ 0.59
RTL6-201ENST00000341255 DESP17661 470 aa18.75■□□□□ 0.59
RTL6-201ENST00000341255 LDHAL6AQ6ZMR3 332 aa18.75■□□□□ 0.59
RTL6-201ENST00000341255 KRT28Q7Z3Y7 464 aa18.75■□□□□ 0.59
RTL6-201ENST00000341255 CWC25Q9NXE8 425 aaPredicted RBP18.75■□□□□ 0.59
RTL6-201ENST00000341255 ACEP12821 1306 aa18.75■□□□□ 0.59
RTL6-201ENST00000341255 GOLIM4O00461 696 aa18.74■□□□□ 0.59
RTL6-201ENST00000341255 GPTP24298 496 aa18.74■□□□□ 0.59
RTL6-201ENST00000341255 MATR3P43243 847 aaKnown RBP eCLIP18.74■□□□□ 0.59
RTL6-201ENST00000341255 CEBPAP49715 358 aaPredicted RBP18.74■□□□□ 0.59
RTL6-201ENST00000341255 FANCAO15360 1455 aa18.74■□□□□ 0.59
RTL6-201ENST00000341255 CCDC194A0A1B0GVG4 234 aa18.74■□□□□ 0.59
RTL6-201ENST00000341255 ZSCAN22P10073 491 aaPredicted RBP18.74■□□□□ 0.59
RTL6-201ENST00000341255 DNA2P51530 1060 aa18.74■□□□□ 0.59
RTL6-201ENST00000341255 SLF2Q8IX21 1173 aa18.74■□□□□ 0.59
RTL6-201ENST00000341255 TSG101Q99816 390 aa18.74■□□□□ 0.59
RTL6-201ENST00000341255 PAXBP1Q9Y5B6 917 aa18.74■□□□□ 0.59
RTL6-201ENST00000341255 YEATS4O95619 227 aa18.74■□□□□ 0.59
RTL6-201ENST00000341255 CATIPQ7Z7H3 387 aa18.74■□□□□ 0.59
RTL6-201ENST00000341255 LUZP1Q86V48 1076 aa18.74■□□□□ 0.59
RTL6-201ENST00000341255 SDSP20132 328 aa18.73■□□□□ 0.59
RTL6-201ENST00000341255 UBE3BQ7Z3V4 1068 aa18.73■□□□□ 0.59
RTL6-201ENST00000341255 TMEM266Q2M3C6 531 aa18.73■□□□□ 0.59
RTL6-201ENST00000341255 ISM2Q6H9L7 571 aa18.73■□□□□ 0.59
RTL6-201ENST00000341255 CCDC113Q9H0I3 377 aa18.73■□□□□ 0.59
RTL6-201ENST00000341255 GBP2P32456 591 aaPredicted RBP18.73■□□□□ 0.59
RTL6-201ENST00000341255 GIMAP7Q8NHV1 300 aa18.73■□□□□ 0.59
RTL6-201ENST00000341255 DYDC1Q8WWB3 177 aa18.73■□□□□ 0.59
RTL6-201ENST00000341255 NOLC1Q14978 699 aaKnown RBP eCLIP18.73■□□□□ 0.59
RTL6-201ENST00000341255 HMG20BQ9P0W2 317 aa18.73■□□□□ 0.59
RTL6-201ENST00000341255 PPFIA3O75145 1194 aa18.72■□□□□ 0.59
RTL6-201ENST00000341255 BMS1Q14692 1282 aaKnown RBP18.72■□□□□ 0.59
RTL6-201ENST00000341255 ADAMTS2O95450 1211 aa18.72■□□□□ 0.59
RTL6-201ENST00000341255 IBSPP21815 317 aaPredicted RBP18.72■□□□□ 0.59
RTL6-201ENST00000341255 PAFAH1B1P43034 410 aa18.72■□□□□ 0.59
RTL6-201ENST00000341255 NLRP5P59047 1200 aa18.72■□□□□ 0.59
RTL6-201ENST00000341255 POTEJP0CG39 1038 aa18.72■□□□□ 0.59
RTL6-201ENST00000341255 CNPY2Q9Y2B0 182 aa18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms